Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq134 125 5e-24 seq233 116 3e-21 seq60 113 3e-20 seq82 104 2e-17 seq411 95.1 9e-15 seq267 93.3 3e-14 seq187 93.3 3e-14 seq7 93.3 3e-14 seq61 89.7 4e-13 seq325 86.0 5e-12 >seq134 Length=106205 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||| | ||| || || |||||||||||| |||||||||| Sbjct 48917 CCACCTCTGAGACGAAGCACAAGATGGAGAGTAGACTCTTTTTGAATGTTGTAATCAGCA 48976 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| | || || ||||||||||| ||||| || || | ||| ||||||| ||| Sbjct 48977 AGTGTGCGACCATCCTCTAACTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGA 49036 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| |||||| ||| ||| | | || || || ||| ||| Sbjct 49037 ATCCCTTCCTTGTCCTGAATCTTAGCTTTAACATTGTCAATAGTATCAGAGCTCTCAACC 49096 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| ||||| || ||||| || || ||||| |||||||| Sbjct 49097 TCCAAAGTAATGGTTTTGCCAGTCAATGTCTTCACAAAGATCTGCAT 49143 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||| | || || || |||||||| ||||||||||| | || | ||| Sbjct 48242 AGACGCAACACAAGGTGAAGAGTAGATTCTTTTTGGATATTGTAATCCGCAAGTGTGCGA 48301 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATC-CGTGGGAACGCCCTC 48667 | || || | ||| || || || || || |||||||| || || |||||| | ||||| Sbjct 48302 CCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCGCTGCTGGTCTGGTGGGATC-CCCTC 48360 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 ||| || |||||| ||| ||| | | | | ||||| ||| ||||| | || Sbjct 48361 CTTATCCTGAATCTTAGCTTTGACATTATCGATTGTGTCTGAACTCTCAACCTCTAAAGT 48420 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || |||||||||||||| Sbjct 48421 TATGGTCTTCCCTGTGAGGGTCTTCACAAAAATCTGCAT 48459 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||||||||| || || ||| ||||| || ||||| |||| Sbjct 48689 CCACCTCTGAGACGAAGCACCAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGCA 48748 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| | || || | ||| || || ||||| || |||| ||| || || | || Sbjct 48749 AGGGTGCGACCATCTTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 48808 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| |||||| || || | | | | ||||| ||| ||| Sbjct 48809 ATTCCTTCCTTGTCCTGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAACC 48868 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || ||||| || | || || |||||||||||||| Sbjct 48869 TCCAAAGTTATGGTCTTTCCGGTAAGGGTCTTCACAAAAATCTGCAT 48915 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | |||||| || ||| ||||| || |||||||||| || | ||| Sbjct 48470 AGACGAAGCACAAGATGTAGAGTAGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGA 48529 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| || || ||||| || |||| ||| || || | || | || ||| Sbjct 48530 CCATCTTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATTCCTTCC 48589 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | | | ||||| ||| ||||||| || Sbjct 48590 TTGTCATGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAACCTCCAAAGTT 48649 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || || |||||||||||||| Sbjct 48650 ATGGTCTTTCCGGTAAGGGTCTTCACAAAAATCTGCAT 48687 >seq233 Length=166549 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||| | ||| || || ||| ||||| || |||||||||| Sbjct 103774 CCACCTCTGAGACGAAGCACAAGATGGAGAGTAGACTCCTTTTGGATGTTGTAATCAGCA 103715 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| | || || ||||||||||| ||||| || || | ||| ||||||| ||| Sbjct 103714 AGTGTGCGACCATCCTCTAACTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGA 103655 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| |||||| ||| ||| | | || || || ||| ||| Sbjct 103654 ATCCCTTCCTTGTCCTGAATCTTAGCTTTAACATTGTCAATAGTATCAGAGCTCTCAACC 103595 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| ||||| || ||||| || || ||||| |||||||| Sbjct 103594 TCCAAAGTAATGGTTTTGCCAGTCAATGTCTTCACAAAGATCTGCAT 103548 Score = 95.1 bits (104), Expect = 9e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||| | || || || |||||||| ||||||||||| | || | ||| Sbjct 104221 AGACGCAACACAAGGTGAAGAGTAGATTCTTTTTGGATATTGTAATCCGCAAGTGTGCGA 104162 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGGAACGCCCTC 48667 | || || | ||| || || ||||| || |||| ||| || || | ||||| | ||||| Sbjct 104161 CCATCCTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATC-CCCTC 104103 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 ||| || |||||| ||| ||| | | | | ||||| ||| ||||||| || Sbjct 104102 CTTATCCTGAATCTTAGCTTTGACATTATCGATTGTGTCTGAACTCTCAACCTCCAAAGT 104043 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || || |||||||||||||| Sbjct 104042 TATGGTCTTTCCTGTGAGGGTCTTCACAAAAATCTGCAT 104004 >seq60 Length=318476 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||||||||| || ||| |||||| || |||||||| |||| | Sbjct 55850 CCACCTCTGAGACGAAGCACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAGTCAGCT 55909 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| | || || || || ||||||||||| || |||| ||| ||||||| || Sbjct 55910 AGTGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATAAGTCTCTGCTGATCCGGTGGG 55969 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||| || || ||||| || ||| | | || ||||| ||| ||| Sbjct 55970 ATTCCCTCTTTATCCTGGATCTTAGCCTTAACATTGTCAATAGTGTCTGAACTCTCAACC 56029 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || ||||| || ||||| || || ||||| |||||||| Sbjct 56030 TCGAGGGTGATGGTTTTGCCAGTCAACGTCTTCACAAAGATCTGCAT 56076 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | ||| || || ||| ||||| ||||||||||||| || | || Sbjct 55631 AGACGAAGCACAAGATGGAGTGTAGACTCCTTTTGGATATTGTAATCAGCAAGGGTACGT 55690 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATC-CGTGGGAACGCCCTC 48667 | || || | |||||| || ||||| || |||| ||| || || |||||| | || || Sbjct 55691 CCATCCTCAAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATC-CCTTC 55749 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 |||||| |||||| || ||| | | | | || || ||| ||||||| || Sbjct 55750 CTTGTCCTGAATCTTCGCCTTGACATTATCGATTGTGTCAGAGCTCTCAACCTCCAAAGT 55809 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || ||||| || | || || || ||||||||||| Sbjct 55810 AATGGTCTTTCCAGTTAGGGTCTTCACGAAAATCTGCAT 55848 >seq82 Length=470516 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||||||||| || ||| |||||| || || |||||||| | Sbjct 87646 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGCC 87705 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | || || | ||||||||||||||| || || | ||| ||||||| ||| Sbjct 87706 AAGGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGA 87765 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||| || || ||||| ||| ||| | | | ||||| ||| ||| Sbjct 87766 ATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATGGTATCTGAGCTCTCAACC 87825 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || ||||| ||||| | ||| || ||||| |||||||| Sbjct 87826 TCTAGGGTGATTGTTTTACCCGTGAGAGTCTTCACAAAGATCTGCAT 87872 Score = 82.4 bits (90), Expect = 6e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | ||| || || ||| ||||| || |||||||||| || | || Sbjct 87427 AGACGAAGCACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCAGCGAGGGTGCGT 87486 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGGAACGCCCTC 48667 |||| || | ||| || || ||||| || |||| ||| || || | ||||| | || || Sbjct 87487 CCGTCTTCGAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATC-CCTTC 87545 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 |||||| ||||||| || || | | | | ||||| ||| ||||||| || Sbjct 87546 CTTGTCTTGAATCTTTGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAAAGT 87605 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || |||||||||||||| Sbjct 87606 GATAGTCTTGCCGGTTAGGGTCTTCACAAAAATCTGCAT 87644 >seq411 Length=621170 Score = 95.1 bits (104), Expect = 9e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||| | || || || || ||||| ||||||||||| | ||| | ||| Sbjct 569433 AGACGCAACACAAGGTGAAGGGTTGATTCCTTTTGGATATTGTAATCCGCTAGCGTGCGA 569374 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATC-CGTGGGAACGCCCTC 48667 | || || | ||| || || ||||| || |||| |||||| || |||||| | || || Sbjct 569373 CCATCCTCGAGCTGTTTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATC-CCTTC 569315 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 |||||| |||||| ||| || | | | | ||||| ||| || |||| || Sbjct 569314 CTTGTCCTGAATCTTAGCTTTGACGTTATCAATTGTGTCTGAGCTCTCAACTTCCAAGGT 569255 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || |||||||| || |||||||| ||||| Sbjct 569254 GATAGTCTTGCCAGTCAAAGTCTTCACAAAAATTTGCAT 569216 >seq267 Length=1500311 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||| || ||||||||||| | || | | ||| | || || | || || |||||||| Sbjct 617540 TCTTTCTGGATATTGTAATCTGCTAAAGTGCGACCATCTTCGAGTTGTTTTCCGGCAAAG 617599 Query 48636 ATCAGTCGCTGTTGATCCG-TGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || |||| |||||| |||| || || | || || ||||| |||||| || || Sbjct 617600 ATAAGTCTCTGTTGGTCCGGTGTGATC-CCTTCTTTGTCTTGAATCTTGGCCTTCACGTT 617658 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | | || || ||| ||||| | || || ||||| ||||||||||| || || Sbjct 617659 ATCAATCGTATCAGAGCTCTCGACCTCTAGAGTGATGGTTTTGCCCGTCAAAGTCTTGAC 617718 Query 48755 AAAAATCTGCATC 48767 ||||||||||||| Sbjct 617719 AAAAATCTGCATC 617731 >seq187 Length=905850 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| |||| ||| ||||| || || || |||||| || ||||||||||||| Sbjct 508429 CCACCCCTGAGCCTCAAGACCAAGTGAAGAGTCGACTCTTTCTGGATATTGTAATCAGCA 508488 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || |||| | || || | || ||||| ||||||||||| | ||||||||||| || Sbjct 508489 AGTGTTCGTCCATCTTCGAGTTGTTTACCAGCAAATATCAGCCTCTGTTGATCCGGTGGT 508548 Query 48660 ACGCCCTCCTTGTC 48673 | ||||| ||||| Sbjct 508549 ATCCCCTCTTTGTC 508562 >seq7 Length=486845 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| |||| ||| ||||| || || || |||||| || ||||||||||| | Sbjct 251237 CCACCCCTAAGCCTCAAGACCAAGTGAAGAGTCGACTCTTTCTGGATATTGTAATCCGCA 251178 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || ||||| | || || | || ||||| ||||||||||| | ||||||||||| || Sbjct 251177 AGTGTTCGACCATCTTCAAGTTGTTTACCAGCAAATATCAGCCTCTGTTGATCCGGTGGT 251118 Query 48660 ACGCCCTCCTTGTC 48673 | ||||| ||||| Sbjct 251117 ATCCCCTCTTTGTC 251104 >seq61 Length=1440766 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||||||||| || |||||||||| || | || |||| || | ||| || |||||||| Sbjct 1074302 CTCTTTTTGGATGTTGTAATCAGCGAGGGTACGTCCGTCTTCAAGCTGTTTCCCGGCAAA 1074243 Query 48635 TATCAGTCGCTGTTGATCCG-TGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAG 48693 || |||| ||| || || | ||||| | || |||||||| ||||||| || || Sbjct 1074242 GATGAGTCTCTGCTGGTCTGGTGGGATC-CCTTCCTTGTCTTGAATCTTTGCCTTGACGT 1074184 Query 48694 AACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTA 48753 | | | | ||||| ||| ||||||| || || || || || || | || || | Sbjct 1074183 TATCGATTGTGTCTGAGCTCTCAACCTCCAAAGTGATAGTCTTGCCGGTTAGGGTCTTCA 1074124 Query 48754 CAAAAATCTGCAT 48766 ||||||||||||| Sbjct 1074123 CAAAAATCTGCAT 1074111 >seq325 Length=1091643 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| || ||||||||||| | || ||||| | || || | || || |||||||| Sbjct 552715 CTCTTTCTGGATATTGTAATCGGCAAGTGTTCGACCATCTTCGAGTTGTTTCCCGGCAAA 552656 Query 48635 TATCAGTCGCTGTTGATCC-GTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAG 48693 || |||| ||| || ||| ||| || | || || ||||| |||||| || || Sbjct 552655 GATTAGTCTCTGCTGGTCCGGTGTGATC-CCTTCTTTGTCTTGAATCTTGGCCTTCACGT 552597 Query 48694 AACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTA 48753 | | | | || || ||| || || | || || ||||| ||||||||||| || | Sbjct 552596 TATCAATCGTATCAGAGCTCTCGACTTCTAGAGTGATGGTTTTGCCCGTCAAAGTCTTGA 552537 Query 48754 CAAAAATCTGCATC 48767 |||||||||||||| Sbjct 552536 CAAAAATCTGCATC 552523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380899595046078