Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq149 122 3e-22 seq120 113 1e-19 seq377 107 6e-18 seq6351 105 2e-17 seq16 105 2e-17 seq299 98.7 3e-15 seq140 98.7 3e-15 seq475 96.9 1e-14 seq279 95.1 4e-14 seq670 84.2 6e-11 seq291 84.2 6e-11 seq127 84.2 6e-11 >seq149 Length=1704810 Score = 122 bits (134), Expect = 3e-22 Identities = 312/469 (67%), Gaps = 16/469 (3%) Strand=Plus/Plus Query 288889 ATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCC 288948 || || |||||||| ||||| || | ||||| || | | | || ||| |||||| Sbjct 889506 ATGTCTGCTCTGTTGGTTGCAGCAACTACAATAACACCAGTGTTACCCTCAAAACCATCC 889565 Query 288949 ATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCA 289008 || || | || |||||||| || ||||| ||||||||||| ||||| || Sbjct 889566 ATCTCAGTCAGAAGCTGATTAAGGGTCTGTTCTCTTTCATCATT---ACCTC------CA 889616 Query 289009 CCCGAATC--GCTCCtttttt--tACCAACAGCATCAATTTCGTCAATGAAAATCACACA 289064 || | || | |||| ||| ||||||||||||| ||||| || | |||| | || Sbjct 889617 CCA-ATTCCGGTTCCTCTTTGCCTACCAACAGCATCTATTTCATCCACAAAAACTATGCA 889675 Query 289065 CGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAAC 289124 ||||| ||| | | | || || || | || | || | ||||| |||| |||||| Sbjct 889676 CGGAGCATTCTCTTTTGCTTTTTTGAAAAGATCACGGACCCTTGATGCACCAACACCAAC 889735 Query 289125 ATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGC 289184 | |||| || ||||| |||||| | || | || ||| | |||| ||||| || || Sbjct 889736 AAACATCTCAACAAACTCAGAACCCGAGATGGAAAAGAAGGGTACACCAGCTTCACCAGC 889795 Query 289185 TACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAA-TAGAACTCCCT 289243 | || | |||| || || ||||| || ||||| || ||| ||| ||||| || | Sbjct 889796 AATAGCTTTTGCCAACAGGGTTTTACCAGTACCAGGAGG-ACCTATAAGGAGAACACCTT 889854 Query 289244 TTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTT 289303 | || | || ||| | | || | ||||||| |||| | ||| || || | || Sbjct 889855 TGGGGATCCGGGCTCCAACCGCAGTAAACCTCTCAGGCTTCTTCAGAAACTCCACCACTT 889914 Query 289304 CCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 || | || | || || |||||| ||| || |||||| ||||||| Sbjct 889915 CCATGAAATCTTGCTTAGCTTCATCAACTCCAGCAACATCATCAAAAGT 889963 >seq120 Length=809644 Score = 113 bits (124), Expect = 1e-19 Identities = 309/468 (66%), Gaps = 14/468 (3%) Strand=Plus/Minus Query 288889 ATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCC 288948 || || |||||||| ||||| || | ||| | || | | | || ||| |||||| Sbjct 3511 ATGTCTGCTCTGTTGGTTGCAGCAACTACGATAACACCAGTGTTACCCTCAAAACCATCC 3452 Query 288949 ATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCA 289008 || || | || |||||||| || ||||| ||||||||||| ||||| || Sbjct 3451 ATCTCAGTCAGAAGCTGATTAAGGGTCTGTTCTCTTTCATCATT---ACCTC------CA 3401 Query 289009 CCCGAATC-GCTCCtttttt--tACCAACAGCATCAATTTCGTCAATGAAAATCACACAC 289065 || | | | |||| ||| ||||||||||||| ||||| || | |||| | ||| Sbjct 3400 CCAATACCAGTTCCTCTTTGCCTACCAACAGCATCTATTTCATCCACAAAAACTATGCAC 3341 Query 289066 GGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACA 289125 |||| ||| | | | || || || | || | || | ||||| |||| ||| ||| Sbjct 3340 GGAGCATTCTCTTTTGCTTTTTTGAAAAGATCACGGACCCTTGATGCACCAACACCGACA 3281 Query 289126 TACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCT 289185 |||| || ||||| |||||| | || | || ||| | |||| ||||| || || Sbjct 3280 AACATCTCAACAAACTCAGAACCCGAGATGGAAAAGAAGGGTACACCAGCTTCACCAGCA 3221 Query 289186 ACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAA-TAGAACTCCCTT 289244 | || | |||| || || ||||| || ||||| || ||| ||| ||||| || || Sbjct 3220 ATAGCTTTTGCCAACAGGGTTTTACCAGTACCAGGAGG-ACCTATAAGGAGAACACCTTT 3162 Query 289245 TGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTC 289304 || | || ||| | | || | ||||||| |||| | ||| || || | ||| Sbjct 3161 GGGGATCCGGGCACCAACCGCAGTAAACCTCTCAGGCTTCTTCAGAAACTCCACCACTTC 3102 Query 289305 CTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 | | || | || || |||||| ||| || |||||| ||||||| Sbjct 3101 CATGAAATCTTGCTTAGCTTCATCAACTCCAGCAACATCATCAAAAGT 3054 >seq377 Length=1720932 Score = 107 bits (118), Expect = 6e-18 Identities = 266/395 (67%), Gaps = 18/395 (5%) Strand=Plus/Plus Query 288955 GTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAA 289014 |||||||| || || || || || || | ||| || ||| |||| ||| ||| Sbjct 1290740 GTTAAAATCTGGTTTAGCGTCTGCTCACGTTCGTCGTTTCCTCCTCC--AATG--CCGGT 1290795 Query 289015 TCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAAT-- 289072 || ||| | || | |||||||||||||| || |||||||| | | ||| || |||| Sbjct 1290796 TC-CTC-TCATTCTCCCAACAGCATCAATCTCATCAATGAACACTAAACAAGGTGAATTA 1290853 Query 289073 ---TTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACA 289129 |||| || | ||| || || ||||| || | || ||||| | |||||| ||| Sbjct 1290854 GCCTTTGCCTTG---TTG--AACAAGTCTCTAACCCTAGAAGCTCCTACGCCAACAAACA 1290908 Query 289130 TTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTG 289189 | |||| || || || |||| | | | || | ||| ||||| || |||| | Sbjct 1290909 TCTCTATGAACTCTGACCCGGACAATGAGAAAAACGGAACACCAGCTTCTCCGGCTATAG 1290968 Query 289190 CCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTA 289249 | | ||||| || ||||| || ||||| || ||||| || | || || ||||| | Sbjct 1290969 CTTTGGCCAGCAGAGTCTTTCCGGTTCCCGGAGGTCCGGTCAACAAGACCCCTTTTGGGA 1291028 Query 289250 CTTTTGCCCCAGCAGACTTA-TATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCA 289308 ||||||||| || || | ||||||| || | ||||| ||||| || || || ||| Sbjct 1291029 TTTTTGCCCCCAAAG-CTGAGAATTTCTCTGGCGTTTTTAAGAATTCAACGATCTCTTCA 1291087 Query 289309 AGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 | || | || || || || |||||||||||| Sbjct 1291088 AAGTCTTGCTTGGCTTCGTCTACTCCTGCTACATC 1291122 >seq6351 Length=14257 Score = 105 bits (116), Expect = 2e-17 Identities = 271/407 (67%), Gaps = 8/407 (2%) Strand=Plus/Minus Query 288938 TAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAAC 288997 |||| || ||||| ||||||||| || || || || ||||| | ||| || ||| | Sbjct 7042 TAAACCCGTCCATTTCTGTTAAAATCTGGTTTAGCGTCTGTTCACGTTCGTCGTTTCCTC 6983 Query 288998 CTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAA 289057 ||| ||| | | | ||| | || | |||||||||||||| || |||||||| | Sbjct 6982 CTCC--AATGCC---AGTTCCTC-TCATTCTCCCAACAGCATCAATCTCATCAATGAACA 6929 Query 289058 TCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAA 289117 | ||| || ||||| | | || | || || ||||| || | || ||||| | Sbjct 6928 CTAAACAAGGTGAATTCGCTTTTGCCTTGTTGAACAAGTCTCTAACCCTAGAAGCTCCTA 6869 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTT 289177 ||||||| |||| |||| || || || | || | | || || | ||| |||| Sbjct 6868 CACCAACAAACATCTCTATGAACTCCGAGCCTGACAATGAAAAAAACGGAACACCGGCTT 6809 Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237 | || |||| ||| | ||||| || ||||| || |||| || ||||| || | | Sbjct 6808 CTCCGGCTATAGCCTTAGCCAGCAGAGTCTTTCCAGTTCGCGGAGGTCCGGTCAACAAGA 6749 Query 289238 CTCCCTTTGGTACTTTTGCCCCAGCAGACTTA-TATTTCTCAGGGCTCTTTAAAAATTCT 289296 | || || || | ||| ||||| || || | ||||||| || | |||| ||||| Sbjct 6748 CGCCTTTCGGGATTTTAGCCCCCAAAG-CTGAGAATTTCTCTGGCGTTCTTAAGAATTCA 6690 Query 289297 ACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 || || || |||| || | ||| || || || ||||||||| || Sbjct 6689 ACGATCTCTTCAAAGTCTTGTTTGGCTTCGTCTACTCCTGCTACGTC 6643 >seq16 Length=3002559 Score = 105 bits (116), Expect = 2e-17 Identities = 271/407 (67%), Gaps = 8/407 (2%) Strand=Plus/Plus Query 288938 TAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAAC 288997 |||| || ||||| ||||||||| || || || || ||||| | ||| || ||| | Sbjct 1840823 TAAACCCGTCCATTTCTGTTAAAATCTGGTTTAGCGTCTGTTCACGTTCGTCGTTTCCTC 1840882 Query 288998 CTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAA 289057 ||| ||| | | | ||| | || | |||||||||||||| || |||||||| | Sbjct 1840883 CTCC--AATGCC---AGTTCCTC-TCATTCTCCCAACAGCATCAATCTCATCAATGAACA 1840936 Query 289058 TCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAA 289117 | ||| || ||||| | | || | || || ||||| || | || ||||| | Sbjct 1840937 CTAAACAAGGTGAATTCGCTTTTGCCTTGTTGAACAAGTCTCTAACCCTAGAAGCTCCTA 1840996 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTT 289177 ||||||| |||| |||| || || || | || | | || || | ||| |||| Sbjct 1840997 CACCAACAAACATCTCTATGAACTCCGAGCCTGACAATGAAAAAAACGGAACACCGGCTT 1841056 Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237 | || |||| ||| | ||||| || ||||| || |||| || ||||| || | | Sbjct 1841057 CTCCGGCTATAGCCTTAGCCAGCAGAGTCTTTCCAGTTCGCGGAGGTCCGGTCAACAAGA 1841116 Query 289238 CTCCCTTTGGTACTTTTGCCCCAGCAGACTTA-TATTTCTCAGGGCTCTTTAAAAATTCT 289296 | || || || | ||| ||||| || || | ||||||| || | |||| ||||| Sbjct 1841117 CGCCTTTCGGGATTTTAGCCCCCAAAG-CTGAGAATTTCTCTGGCGTTCTTAAGAATTCA 1841175 Query 289297 ACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 || || || |||| || | ||| || || || ||||||||| || Sbjct 1841176 ACGATCTCTTCAAAGTCTTGTTTGGCTTCGTCTACTCCTGCTACGTC 1841222 >seq299 Length=980704 Score = 98.7 bits (108), Expect = 3e-15 Identities = 278/416 (67%), Gaps = 16/416 (4%) Strand=Plus/Minus Query 288939 AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998 |||||||||||| ||| || | ||||||| || ||||| || ||||||||| || Sbjct 813047 AAATCCATCCATCTCTGTCAACAACTGATTAATGGTCTGTTCTCTCTCATCATTT---CC 812991 Query 288999 TCTTGAATCACCCGAATCGCTCCttttt--ttACCAACAGCATCAATTTCGTCAATGAAA 289056 || | || || | |||||| | | | || ||||| ||||| || ||||||||| Sbjct 812990 TCCT--CCCATCCCA---GCTCCTCTCTGCCTCCCCACAGCGTCAATCTCATCAATGAAA 812936 Query 289057 ATCACACACGGAGAATTTTGTC-TCGCAATTGCAAATAATTCTCTTACACGGGATGCTCC 289115 | | ||| || | ||| | | | || | | || || || || || | ||||| || Sbjct 812935 ACGATACAAGG-GGCTTTCGACTTAGCCTTCTCGAACAAATCCCTAACTCTAGATGCACC 812877 Query 289116 AAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTG 289174 | ||| || | | || ||||| || || |||| | || | ||| | ||| || Sbjct 812876 CACACCCACGAAAAGCTCCACAAACTCTGAGGCGG-CGCAAGAGAAGAACGGTACTCCTG 812818 Query 289175 CTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATA 289234 |||| || || || ||||| |||| || |||||||| || ||||| ||||| | || Sbjct 812817 CTTCCCCAGCCACCGCCCTGGCCAAGAGGGTCTTACCCGTACCAGGCGGTCCAAC-AAGC 812759 Query 289235 GAACTCCCTTTGGTACTTTTGCCCCAGCAGACT-TATATTTCTCAGGGCTCTTTAAAAAT 289293 ||| |||||| | | | ||| | | || || | || || ||||| |||| || || Sbjct 812758 AAACACCCTTTAGGAATCTTGGCACCCAAGGCTGTGTACTTATCAGGATTCTTCAAGAAA 812699 Query 289294 TCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAA 289349 || |||| ||||| | ||| || || | |||| || || ||||| ||||| Sbjct 812698 TCCACAACTTCCTGTAATTCCAGCTTAGCTTGATCAGCCCCAGCAACATCTGCAAA 812643 >seq140 Length=1024829 Score = 98.7 bits (108), Expect = 3e-15 Identities = 166/237 (70%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 156283 AACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAAT 156342 |||||| |||||| | |||||||||||||||||| || ||||| | ||||||| |||| Sbjct 727591 AACTTACTTGAGGCCTTGGTGTTCCAGCGTTGAAAAGAGTAGGAGATGCATGAGTAAACC 727650 Query 156343 ACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATAC 156402 | | | |||||| ||| |||||| | | |||| || | | |||||| | Sbjct 727651 ATCTCTGAGACATCAAATGGTATGTTTGGATTGCGGAGTCAATATCATCCTTGTGAATGC 727710 Query 156403 AGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCAT--CAATTCG 156460 | || ||||||||| ||| || ||||| | ||| |||| | ||| | | || Sbjct 727711 CAACAGCTACCCTCATCAGCATGTGTTGAGGCCTCTCAACAA-CTTTCCCTTGGACTTTT 727769 Query 156461 CAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACG 156517 || ||||||| | || ||||||||||| ||||| ||||| | ||||||||| Sbjct 727770 AAG-AGGTATGATCTCTCAAGAGTTTTAAATCCGAAGAAATCATATTCAAAATCACG 727825 >seq475 Length=165231 Score = 96.9 bits (106), Expect = 1e-14 Identities = 281/418 (67%), Gaps = 20/418 (5%) Strand=Plus/Minus Query 288939 AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998 |||||||||||| ||| || | ||||||| || ||||| || ||||||||| || Sbjct 6269 AAATCCATCCATCTCTGTCAACAACTGATTAATGGTCTGTTCTCTCTCATCATTT---CC 6213 Query 288999 TCTTGAATCACCCGAATCGCTCCttttt--ttACCAACAGCATCAATTTCGTCAATGAAA 289056 || | || || | |||||| | | | || ||||| ||||| || |||||||| Sbjct 6212 TCCT--CCCATCCCA---GCTCCTCTCTGCCTCCCCACAGCGTCAATCTCATCAATGAAT 6158 Query 289057 ATCACACACGGAGAATTTTGTC-TCGCAATTGCAAATAATTCTCTTACACGGGATGCTCC 289115 | | ||| || | ||| | | | || | | || || || || || | ||||| || Sbjct 6157 ACAATACAAGG-GGCTTTCGACTTGGCCTTCTCGAACAAATCCCTAACTCTAGATGCACC 6099 Query 289116 AAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTG 289174 | ||| || | | || ||||| || || |||| | || | ||| | ||| || Sbjct 6098 CACACCCACGAAAAGCTCCACAAACTCTGAGGCGG-CGCAAGAGAAGAACGGTACTCCTG 6040 Query 289175 CTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATA 289234 |||| || || || ||||| |||| || |||||||| || ||||| ||||| | || Sbjct 6039 CTTCCCCAGCCACCGCCCTGGCCAAGAGGGTCTTACCCGTACCAGGCGGTCCAAC-AAGC 5981 Query 289235 GAACTCCCTTT-GGTACTTTTGC-CCCAGCAGACT-TATATTTCTCAGGGCTCTTTAAAA 289291 ||| |||||| |||| || || |||| || || | || || ||||| |||| || | Sbjct 5980 AAACACCCTTTAGGTATCTTGGCACCCA--AGGCTGTGTACTTATCAGGATTCTTCAAGA 5923 Query 289292 ATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAA 289349 | || |||| ||||| | ||| || || | |||| || || ||||| ||||| Sbjct 5922 AATCCACAACTTCCTGTAATTCCAGCTTAGCTTGATCAGCCCCAGCAACATCTGCAAA 5865 >seq279 Length=1218690 Score = 95.1 bits (104), Expect = 4e-14 Identities = 267/406 (66%), Gaps = 7/406 (2%) Strand=Plus/Plus Query 133232 GCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGA 133291 || || || ||||| || ||||| ||||| || ||| | | | | ||||| ||| Sbjct 624710 GCTTTCTTCGCTGCCTCCGACGGTATCGTTCTAGAGAATCTCGCATCTCGGTTCATGTCC 624769 Query 133292 GAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATC 133351 || || ||| | | || || ||||| || || || | ||||| ||||| || ||||| Sbjct 624770 GATGTCCAAGTCTCGGAGGCGCGTGCTTTCTACGGTTTCCAGATCGCGATTGAGAATATA 624829 Query 133352 CATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCAC 133411 || ||| | ||| | ||| | ||||||||||||||||| | | ||| || Sbjct 624830 CACTCTGAGATGTATAGTCTTCTTCTCGATACTTACATCAAAGACAACAAAGAGAGAGAC 624889 Query 133412 AAACTATTCAACGCCATT-AG-CGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTA 133469 | || ||| || ||| || ||| |||||||| | |||||| || | ||||| | Sbjct 624890 CATCTCTTCCGTGCGATTGAGACGA--TTCCTTGTGTCGCGAAGAAAGCTCAGTGGGCGA 624947 Query 133470 TTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAG 133529 | ||||||||| ||| | || || ||| || |||||||||| ||| | Sbjct 624948 TGAAATGGATC---GACGGATCTCAGACCTTCGCTGAACGAATCGTTGCTTTCGCTTGCG 625004 Query 133530 TAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTA 133589 | || || || || ||| || ||||| || || || |||||||| || || || Sbjct 625005 TTGAAGGTATCTTCTTCTCCGGAAGCTTCTGTTCCATCTTCTGGCTTAAGAAACGAGGAC 625064 Query 133590 TTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGA 133635 | | ||||| | ||| || |||||||| || || | ||||| Sbjct 625065 TCATGCCTGGGTTAACTTTCTCAAACGAACTGATCTCTCGAGACGA 625110 >seq670 Length=338735 Score = 84.2 bits (92), Expect = 6e-11 Identities = 213/318 (67%), Gaps = 6/318 (2%) Strand=Plus/Plus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||||| |||||||| || || || || || | || ||| | | | ||| || | Sbjct 310379 ACCAATTGCATCAATCTCATCTATAAATATAATACTCGGTGCAGATGCTCTAGCCTCTTG 310438 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 || || | ||| || | || | |||| ||||||| |||| || | || || ||| | Sbjct 310439 GAACAAATGTCTCACCCTTGAAGGCCCAACACCAACAAACATCTCCATGAAATCTGAACC 310498 Query 289149 GGATACTTGAATGAAT-GTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 |||| | || ||| | ||| | ||| ||||| || | || | ||| |||| Sbjct 310499 AGATA-TAGATAGAAACGGCACACCCGATTCCCCTGCAGTAGCTTTTGCTAAAAGGGTCT 310557 Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA-C 289266 | || ||||||||||| || |||| || | || || || | ||| ||||| || | | Sbjct 310558 TCCCGGTTCCAGGTGGACCTACTAAAAGCGCACCTTTCGGGATTTTAGCCCC--CAAATC 310615 Query 289267 TT-ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325 || ||| |||| ||| |||| | || | ||||| ||| | ||| | ||| ||||| Sbjct 310616 TTCATACTTCTTTGGGTTCTTAAGGAAATGTACAAACTCCATGATTTCTTGTTTAGCCTC 310675 Query 289326 ATCACATCCTGCTACATC 289343 |||||||| |||||||| Sbjct 310676 GTCACATCCAGCTACATC 310693 >seq291 Length=689338 Score = 84.2 bits (92), Expect = 6e-11 Identities = 213/318 (67%), Gaps = 6/318 (2%) Strand=Plus/Minus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||||| |||||||| || || || || || | || ||| | | | ||| || | Sbjct 679286 ACCAATTGCATCAATCTCATCTATAAATATAATACTCGGTGCAGATGCTCTAGCCTCTTG 679227 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 || || | ||| || | || | |||| ||||||| |||| || | || || ||| | Sbjct 679226 GAACAAATGTCTCACCCTCGAAGGCCCAACACCAACAAACATCTCCATGAAATCTGAACC 679167 Query 289149 GGATACTTGAATGAAT-GTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 |||| | || ||| | ||| | ||| ||||| || | || | ||| |||| Sbjct 679166 AGATA-TAGACAGAAACGGCACACCCGATTCCCCTGCAGTAGCTTTTGCTAAAAGGGTCT 679108 Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA-C 289266 | || ||||||||||| || |||| || | || || || | ||| ||||| || | | Sbjct 679107 TCCCGGTTCCAGGTGGGCCTACTAAAAGCGCACCTTTCGGGATTTTAGCCCC--CAAATC 679050 Query 289267 TT-ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325 || ||| |||| ||| |||| | || | ||||| ||| || ||| | ||| ||||| Sbjct 679049 TTCATACTTCTTTGGGTTCTTAAGGAAATGTACAAACTCCATAATTTCTTGTTTAGCCTC 678990 Query 289326 ATCACATCCTGCTACATC 289343 |||||||| || ||||| Sbjct 678989 TTCACATCCAGCAACATC 678972 >seq127 Length=1358402 Score = 84.2 bits (92), Expect = 6e-11 Identities = 151/220 (69%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 156049 TACCATTCCTCTTGCCACCC---TGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 |||| || |||||||| || || || ||||| |||||||| | |||||| |||| | Sbjct 1059903 TACCCTTTCTCTTGCCTCCTCCTTGGTCAACATAACGAGCAGTATCATTGAATACACGCA 1059962 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165 |||| |||| ||||||||| || || ||||| || || ||||| | || | || | Sbjct 1059963 GCATTGGAACAATACCATTAGATGTTCCATTTGTGCCACGAATGTAACTTCCGGTTGCAC 1060022 Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225 | | ||||||| | ||||||||||||| ||||| || ||| || || | Sbjct 1060023 GGATATTATGAGCTGAAACACCAATACCACCTGCAGATTTACTTATAACAGCACACTCTT 1060082 Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 | | || | | || || ||||| |||||||| ||| Sbjct 1060083 TGAGTGTTTCATATATGCCCTCAATGCTATCATCTTTCAT 1060122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471663231170682