Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq280 120 3e-22 seq82 118 9e-22 seq240 116 3e-21 seq60 107 2e-18 seq267 105 6e-18 seq411 104 2e-17 seq244 100 2e-16 seq61 100 2e-16 seq454 95.1 1e-14 seq325 93.3 4e-14 seq6139 91.5 1e-13 seq99 91.5 1e-13 seq134 86.0 5e-12 >seq280 Length=1980472 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | || || | |||||||| | || || ||||| || || ||||||||| Sbjct 1633037 CCTCCTCTCAGACGGAGCACCAAATGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGGCG 1632978 Query 27081 A-TGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | | ||||||| |||||||| |||||| | || |||||||| || |||||||| Sbjct 1632977 AGTGTT-CTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGCGG 1632919 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || || || || |||||| ||||| | || | ||||||| | || || Sbjct 1632918 GATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGATGACTCTAC 1632859 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| ||||| | || ||||| | |||||||||||||| ||||| Sbjct 1632858 CTCTAGGGTTATCGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCAT 1632811 >seq82 Length=470516 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || ||||| || || ||||| ||| || | |||| | || || Sbjct 87664 ACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGCCAAGGTGCGACCATCCTCT 87723 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| |||||||| | || || | ||| |||||||| || | ||||||||||| | Sbjct 87724 AGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGAATTCCCTCTTTATCTTGG 87783 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | | || | || |||| | ||||| ||||| || || | ||| Sbjct 87784 ATCTTAGCTTTGACATTGTCAATGGTATCTGAGCTCTCAACCTCTAGGGTGATTGTTTTA 87843 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||| ||||| ||||||||||| |||||| Sbjct 87844 CCCGTGAGAGTCTTCACAAAGATCTGCATA 87873 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || ||||| ||||||||||| | | | ||||||| ||||| || || Sbjct 87904 GTCGACTCCTTTTGGATATTGTAGTCAGCAAGAGTCCTTCCGTCTTCAAGCTGCTTGCCC 87963 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || | ||| || ||||| || | ||||||||||| ||||||| ||| Sbjct 87964 GCGAATATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCTTGGATCTTGGCTTTG 88023 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||||| | ||||| || || || || | |||||| |||| ||| Sbjct 88024 ACATTGTCAATGGTGTCTGAGCTCTCAACCTCGAGGGTGATGGTTTTGCCAGTCAAAGTC 88083 Query 27231 TTCACAAAGATTTGCATA 27248 ||||||||||| |||||| Sbjct 88084 TTCACAAAGATCTGCATA 88101 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || ||||| || ||||| || | | |||| |||||||||||||||| || Sbjct 87448 GTAGACTCCTTTTGGATGTTGTAATCAGCGAGGGTGCGTCCGTCTTCGAGCTGTTTCCCA 87507 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||| | ||| || || || || | || || || || ||||| || Sbjct 87508 GCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCTTGAATCTTTGCCTTG 87567 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||||| | ||||| || | ||| |||| ||||| || || || Sbjct 87568 ACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAAAGTGATAGTCTTGCCGGTTAGGGTC 87627 Query 27231 TTCACAAAGATTTGCATA 27248 |||||||| || |||||| Sbjct 87628 TTCACAAAAATCTGCATA 87645 >seq240 Length=230833 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | || || | |||||||| | ||| || ||||| || || ||||||||| Sbjct 111266 CCTCCTCTCAGACGGAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGCG 111207 Query 27081 A-TGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | | ||||||| |||||||| |||||| | || || ||||| || ||||| || Sbjct 111206 AGTGTT-CTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGG 111148 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || || || || |||||| ||||| | || | ||||||| | || || Sbjct 111147 GATCCCTTCCTTGTCTTGGATCTTTGCTTTCACATTGTCGATCGTGTCTGATGACTCTAC 111088 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| ||||| | || ||||| | |||||||||||||| ||||| Sbjct 111087 CTCTAGGGTTATCGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCAT 111040 >seq60 Length=318476 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 |||||||| | || || ||||| || ||||||||||| ||| || |||| | || || Sbjct 55868 ACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAGTCAGCTAGTG-TGCGACCATCCTC 55926 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | ||||||||||| | || || | ||| |||||||| || | ||||||||||| Sbjct 55927 TAATTGTTTACCGGCAAAGATAAGTCTCTGCTGATCCGGTGGGATTCCCTCTTTATCCTG 55986 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| || | | || | |||||||| ||||| || || || || | ||| Sbjct 55987 GATCTTAGCCTTAACATTGTCAATAGTGTCTGAACTCTCAACCTCGAGGGTGATGGTTTT 56046 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| |||| || ||||||||||| |||||| Sbjct 56047 GCCAGTCAACGTCTTCACAAAGATCTGCATA 56077 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || ||||| |||||||| | | | || | || || Sbjct 55412 ACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCTGCAAGGGTACGACCATCCTCA 55471 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| || ||| | ||||| | ||| || ||||| || | || || || || Sbjct 55472 AGCTGTTTTCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTCCTGA 55531 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | | |||| ||||||| | ||||| || ||||| || | ||| Sbjct 55532 ATCTTAGCCTTGACGTTATCTATTGTGTCTGAGCTCTCAACCTCCAGAGTAATGGTTTTT 55591 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || |||||||||||||||||| Sbjct 55592 CCAGTAAGGGTCTTCACAAAGATTTGCATA 55621 >seq267 Length=1500311 Score = 105 bits (116), Expect = 6e-18 Identities = 167/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-G 27077 |||| || | ||||| | ||||| |||| || || || || |||||||||||||| | Sbjct 618414 TGCCACCTCTCAACCTAAGAACCAAGTGTAGAGTTGACTCCTTCTGAATATTGTAGTCAG 618473 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 | ||| | || | ||||| || |||||||| ||| | || || | ||| || ||||| Sbjct 618474 CCAATG-TACGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGTCTCTGCTGGTCCGGA 618532 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 | | || || ||||| ||||||| || | | || | ||||| | | |||| Sbjct 618533 GTGATGCCTTCCTTATCTTGGATCTTGGCCTTGACATTATCAATGGTGTCGGAGCTTTCA 618592 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 || || |||||||| | || || || ||||| || |||||||| |||||| || || Sbjct 618593 ACCTCAAGAGTTATGGTCTTCCCGGTAAGAGTCTTAACAAAGATCTGCATACCTCCT 618649 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 ||||| |||| || || ||||| || || ||||| || | || || | || | ||||| Sbjct 617978 ACCAAGTGTAGTGTTGACTCTTTCTGGATGTTGTAATC-CGCAAGTGTCCGACCATCTTC 618036 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||| || || ||||| | || || | ||| || ||||| || | || || || || Sbjct 618037 GAGTTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTG 618096 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||||| || | | |||| ||||||| | || ||||||||||| || | ||| Sbjct 618097 GATCTTGGCCTTGACATTGTCTATTGTGTCTGAGCTCTCCACTTCTAGAGTAATGGTTTT 618156 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| || || ||||||||||| |||||||| Sbjct 618157 GCCAGTGAGGGTTTTCACAAATATTTGCAT 618186 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || ||||| || |||||||| || ||| | || ||| | |||||||| ||||| || Sbjct 617534 GTTGATTCTTTCTGGATATTGTAATCTGCTAAAGT-GCGACCATCTTCGAGTTGTTTTCC 617592 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | || || | |||||| ||||| | | || ||||| || |||||| || Sbjct 617593 GGCAAAGATAAGTCTCTGTTGGTCCGGTGTGATCCCTTCTTTGTCTTGAATCTTGGCCTT 617652 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | | || | || || | | || || |||||||| || | ||||||||||| ||| Sbjct 617653 CACGTTATCAATCGTATCAGAGCTCTCGACCTCTAGAGTGATGGTTTTGCCCGTCAAAGT 617712 Query 27230 TTTCACAAAGATTTGCAT 27247 || ||||| || ||||| Sbjct 617713 CTTGACAAAAATCTGCAT 617730 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || || | || | ||| | ||| | || || || || || || ||||| || Sbjct 618186 TGCCACCACGAAGACGAAGTACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAG 618245 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | || |||| ||||| |||||||| || |||| || | ||| || ||||| | Sbjct 618246 CCAAAGTACGACCGTCCTCGAGTTGTTTACCTGCAAAAATAAGTCTCTGCTGGTCCGGAG 618305 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | || || ||||| ||||||| || | | || | ||||| | ||| | Sbjct 618306 TGATGCCTTCCTTATCTTGGATCTTGGCCTTGACATTGTCAATCGTGTCAGAACTTTCGA 618365 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || |||||||| | |||||||| || ||||| |||||||||||||| Sbjct 618366 CCTCAAGAGTTATGGTCTTGCCCGTAAGGGTTTTAACAAAGATTTGCAT 618414 >seq411 Length=621170 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 |||||||| | || || ||||| || ||||||||||| || || |||| | || || Sbjct 568740 ACCAAATGGAGAGTGGACTCTTTCTGGATATTGTAGTCAG-CAAGTGTGCGACCATCCTC 568682 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| ||||| || | || || | ||| |||||||| || | ||||||||||| Sbjct 568681 TAGCTGCTTACCAGCAAAGATAAGTCTCTGCTGATCCGGTGGGATTCCCTCTTTATCCTG 568622 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| || | | || | |||||||| ||||| || || || || | ||| Sbjct 568621 GATCTTAGCCTTAACATTGTCAATAGTGTCTGAACTCTCAACCTCAAGGGTGATGGTTTT 568562 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| |||| || ||||||||||| |||||| Sbjct 568561 GCCAGTCAACGTCTTCACAAAGATCTGCATA 568531 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTC 27091 ||||| || | || | || || || ||||| |||||||| || ||| || ||| | Sbjct 569430 CGCAACACAAGGTGAAGGGTTGATTCCTTTTGGATATTGTAATCCGCTAGCGT-GCGACC 569372 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 || ||||||||||| || || | ||||| | |||||| || || || | || || || Sbjct 569371 ATCCTCGAGCTGTTTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTT 569312 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || ||||| ||| | | | || | ||||||| | |||||||| | || || Sbjct 569311 GTCCTGAATCTTAGCTTTGACGTTATCAATTGTGTCTGAGCTCTCAACTTCCAAGGTGAT 569252 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| |||| ||| |||||||| ||||||||| Sbjct 569251 AGTCTTGCCAGTCAAAGTCTTCACAAAAATTTGCATA 569215 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 ||||| || | || || || || ||||||||||| || | || || | || | || || Sbjct 569196 ACCAAGTGAAGGGTTGATTCCTTCTGAATATTGTAATC-CGCAAGTGTACGACCATCCTC 569138 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||| || ||| | ||||| | ||| || || || || | || || || || Sbjct 569137 AAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTG 569078 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||| || | | | || | ||||||| | ||||| || ||||| || | ||| Sbjct 569077 AATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAACCTCCAGAGTAATGGTTTT 569018 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || |||||||||||||||||| Sbjct 569017 TCCAGTAAGGGTCTTCACAAAGATTTGCATA 568987 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27030 AACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGC 27089 ||||| | ||||| || | || || ||||| || || ||||| || || | | || Sbjct 568521 AACCGGAGAACCAAGTGAAGGGTCGATTCTTTCTGGATGTTGTAATCTGCCAAGGTACGA 568462 Query 27090 TCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCT 27149 | ||||| ||||||||||| ||| | || | | ||| |||||||| || | || || Sbjct 568461 CCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTCTGCTGATCCGGAGGAATGCCTTCC 568402 Query 27150 TTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTT 27209 || || |||||| || | | || | ||||| | | ||||| || ||||| Sbjct 568401 TTGTCCTGGATCTTCGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTG 568342 Query 27210 ATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | ||||| || || |||||||| || |||||||| Sbjct 568341 ATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 568304 >seq244 Length=507168 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || ||||| |||||||| || |||| |||| || Sbjct 235924 ACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAGTGTGCGACCGTCCTCA 235983 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| || ||||| || | || || ||||| | Sbjct 235984 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGG 236043 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | || | ||||| | | ||||| || || || || | || Sbjct 236044 ATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTTC 236103 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || ||||| || |||||||| |||||| Sbjct 236104 CCGGTGAGAGTCTTAACAAAGATCTGCATA 236133 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || ||||| |||||||| || | | || | |||||| Sbjct 236836 ACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGGCCATCTTCG 236895 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || ||||| | || || | || |||||||| || | ||| || || || | Sbjct 236896 AGCTGCTTTCCGGCAAAGATAAGCCTTTGCTGATCCGGAGGGATACCTTCCTTGTCCTGG 236955 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | | || | ||||| | | ||| || || || || |||| ||| Sbjct 236956 ATCTTGGCCTTAACGTTGTCGATTGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTTTTC 237015 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || ||||| || |||||||| ||||| Sbjct 237016 CCGGTGAGAGTCTTAACAAAGATCTGCAT 237044 >seq61 Length=1440766 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || ||||| ||||||||||| | | | ||||||| ||||| || || Sbjct 1073852 GTCGACTCCTTTTGGATATTGTAGTCAGCAAGAGTCCTTCCGTCTTCAAGCTGCTTGCCC 1073793 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || | ||| || ||||| || | ||||||||||| ||||||| ||| Sbjct 1073792 GCGAATATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCTTGGATCTTGGCTTTG 1073733 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||||| | ||||| || || || || | |||||| |||| ||| Sbjct 1073732 ACATTGTCAATGGTGTCTGAGCTCTCAACCTCGAGGGTGATGGTTTTGCCAGTCAAAGTC 1073673 Query 27231 TTCACAAAGATTTGCATA 27248 ||||||||||| |||||| Sbjct 1073672 TTCACAAAGATCTGCATA 1073655 >seq454 Length=111167 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || ||||| |||||||| || |||| |||| || Sbjct 50131 ACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAGTGTGCGACCGTCCTCA 50190 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| || ||||| || | || || ||||| | Sbjct 50191 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGG 50250 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | || | ||||| | | ||||| || || || || | || Sbjct 50251 ATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTTC 50310 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| || |||||||| || |||||| Sbjct 50311 CCGGTCAACGTCTTCACAAAAATCTGCATA 50340 >seq325 Length=1091643 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || | ||||| | ||||| |||| || || || |||||||||||||| || Sbjct 551839 TGCCACCTCTCAACCTAAGAACCAAGTGTAGAGTTGACTCCTTTTGAATATTGTAATCCG 551780 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | || | ||||| || || ||||| || | || || | ||| || ||||| | Sbjct 551779 CCAAAGTACGACCATCTTCAAGTTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCCGGAG 551720 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | ||| || ||||| |||||| || | | || | ||||| | | ||||| Sbjct 551719 TAATACCTTCCTTATCTTGGATCTTCGCCTTGACATTGTCAATCGTGTCAGAGCTTTCAA 551660 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 | || |||||||| | || || || ||||| || |||||||| |||||| || || Sbjct 551659 CCTCAAGAGTTATGGTCTTCCCGGTAAGAGTCTTAACAAAGATCTGCATACCTCCT 551604 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCA-TGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || ||||| || |||||||| ||| | |||| || | |||||||| ||||| || Sbjct 552720 GTCGACTCTTTCTGGATATTGTAATCGGCAAGTGTT-CGACCATCTTCGAGTTGTTTCCC 552662 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | || || | ||| || ||||| | | || ||||| || |||||| || Sbjct 552661 GGCAAAGATTAGTCTCTGCTGGTCCGGTGTGATCCCTTCTTTGTCTTGAATCTTGGCCTT 552602 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | | || | || || | | || ||||||||||| || | ||||||||||| ||| Sbjct 552601 CACGTTATCAATCGTATCAGAGCTCTCGACTTCTAGAGTGATGGTTTTGCCCGTCAAAGT 552542 Query 27230 TTTCACAAAGATTTGCAT 27247 || ||||| || ||||| Sbjct 552541 CTTGACAAAAATCTGCAT 552524 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 |||||||| | || || ||||| || || ||||| || | || || | || | || || Sbjct 552276 ACCAAATGCAGAGTTGACTCTTTCTGGATGTTGTAATC-CGCAAGTGTCCGACCATCCTC 552218 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||| || || ||||| | || || | ||| || ||||| | | || || || || Sbjct 552217 GAGTTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCCGGAGTGATGCCTTCCTTGTCTTG 552158 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||||| || | | || | ||||| | | ||||||||| |||||||| | || Sbjct 552157 GATCTTGGCCTTGACATTGTCAATCGTGTCAGAGCTTTCAACTTCAAGAGTTATGGTCTT 552098 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| || || || || |||||||||||||| Sbjct 552097 GCCAGTAAGGGTCTTAACAAAGATTTGCAT 552068 >seq6139 Length=4094 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 ||||| |||| ||||| ||||| || | ||||| || ||||| || |||||||| || Sbjct 96 CCTCCACGCAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCC 155 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || |||| || | ||| || || || | || | | ||| || ||||| || Sbjct 156 AAGGTTCTGC-CGTCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGG 214 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||||||| || ||||||| |||| | | || | ||||| | || || Sbjct 215 GATACCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAACTCTCCAC 274 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || | || |||| || || |||| || || ||||||||||||||| || Sbjct 275 CTCCAAGGTGATAGTCTTCCCGGTCAACGTCTTGACAAAGATTTGCATACCT 326 >seq99 Length=1465915 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 ||||| |||| ||||| ||||| || | ||||| || ||||| || |||||||| || Sbjct 434382 CCTCCACGCAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCC 434441 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || |||| || | ||| || || || | || | | ||| || ||||| || Sbjct 434442 AAGGTTCTGC-CGTCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGG 434500 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||||||| || ||||||| |||| | | || | ||||| | || || Sbjct 434501 GATACCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAACTCTCCAC 434560 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || | || |||| || || |||| || || ||||||||||||||| || Sbjct 434561 CTCCAAGGTGATAGTCTTCCCGGTCAACGTCTTGACAAAGATTTGCATACCT 434612 >seq134 Length=106205 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || |||||||| ||||| || || | || |||| ||| Sbjct 48023 ACCAAGTGGAGAGTTGATTCCTTTTGAATGTTGTAATCAGCCAAAGTCCGACCGTCCTCG 48082 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| || || | || || | ||| || || || || | |||||||| || Sbjct 48083 AGCTGTTTCCCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGGATCCCCTCTTTGTCCTGA 48142 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | | || | ||||||| | ||||| || | || |||| || Sbjct 48143 ATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAACATCCAAGGTAATAGTCTTC 48202 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| ||||||||||||||||||||| Sbjct 48203 CCTGTCAATGTTTTCACAAAGATTTGCATA 48232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424892005622832