Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq82 116 3e-21 seq280 113 3e-20 seq61 113 3e-20 seq6139 111 1e-19 seq99 111 1e-19 seq190 109 4e-19 seq411 107 1e-18 seq384 107 1e-18 seq240 107 1e-18 seq60 107 1e-18 seq267 104 2e-17 seq134 102 6e-17 seq325 98.7 7e-16 seq233 95.1 8e-15 seq75 86.0 4e-12 >seq82 Length=470516 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||| ||||| || || || |||||||| || || || | | Sbjct 88328 ATGCAAATTTTCGTGAAAACACTCACTGGTAAGACCATCACTCTTGAGGTCGAGAGCTCT 88269 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| |||| |||| | | ||||| ||||| | || || || || Sbjct 88268 GACACCATCGACAATGTTAAGGCAAAGA-TCCAGGACAAGGAAGGCATTCCTCCGGACCA 88210 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | || || || ||||| ||||| || ||||| | ||||| || | ||||||||| Sbjct 88209 GCAAAGATTGATCTTCGCCGGTAAACAGCTTGAAGATGGCCGCACCTTGGCCGATTACAA 88150 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || ||||||||||| | ||||| ||| Sbjct 88149 CATCCAGAAAGAGTCCACCCTCCATTTGGTT 88119 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || |||||||| ||||| ||||| || || ||||| | | Sbjct 87872 ATGCAGATCTTTGTGAAGACTCTCACGGGTAAAACAATCACCCTAGAGGTTGAGAGCTCA 87813 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | ||| | || | | || ||||| || | || || ||||| Sbjct 87812 GATACCATTGACAATGTCAAAGCTAAGA-TCCAAGATAAAGAGGGAATTCCACCGGATCA 87754 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || |||||||| || || || || || | ||||| || | ||||||||| Sbjct 87753 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACCTTGGCCGATTACAA 87694 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || ||||||||||| | ||||| || Sbjct 87693 CATCCAGAAAGAGTCCACCCTCCATTTGGT 87664 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || || || || |||||| | || ||||| | | Sbjct 87644 ATGCAGATTTTTGTGAAGACCCTAACCGGCAAGACTATCACTTTGGAGGTTGAGAGCTCA 87585 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || ||| ||| ||||| ||||| | || ||||| || Sbjct 87584 GACACAATCGATAACGTCAAGGCAAAGATTCAAGACAAGGAAGGGATCCCACCAGACCAG 87525 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || ||||| || ||||||| |||||| | | ||||||||| Sbjct 87524 CAGAGACTCATCTTTGCTGGGAAACAGCTCGAAGACGGACGCACCCTCGCTGATTACAAC 87465 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| ||||| || Sbjct 87464 ATCCAAAAGGAGTCTAC 87448 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || || || || |||||| | || ||||| | | Sbjct 87416 ATGCAGATTTTTGTGAAGACCCTTACCGGCAAGACCATCACTTTGGAGGTTGAGAGCTCA 87357 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| || ||||| | || | || ||||| ||||| | || ||||| || Sbjct 87356 GACACTATTGATAACGTTAAAGCCAAGA-TTCAGGACAAGGAAGGGATCCCACCAGACCA 87298 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || || || ||||| || || || | || ||| | | |||||||| Sbjct 87297 GCAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGGACTCTTGCAGATTACAA 87238 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||| || | || || ||| Sbjct 87237 CATCCAGAAGGAGTCTACTCTTCACTTGGTT 87207 >seq280 Length=1980472 Score = 113 bits (124), Expect = 3e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || |||||| | ||||| || ||||| || || || || || || Sbjct 1632808 AAAATGCAGATCTTTGTGAAAACCTTAACGGGGAAGACGATAACCCTAGAGGTAGAGTCA 1632867 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | ||| | || || ||||| ||||| | ||||| || Sbjct 1632868 TCAGACACGATCGACAATGTGAAAGC-GAAGATCCAAGACAAGGAAGGGATCCCGCCGGA 1632926 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || |||||| | || || ||||| ||||| |||||||||| | || | | ||| || Sbjct 1632927 CCAGCAGCGTCTGATCTTCGCCGGGAAACAGCTGGAAGACGGGAGAACACTCGCCGACTA 1632986 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| || |||||||| || | ||||| || | | || ||||||| Sbjct 1632987 CAACATCCAGAAAGAGTCGACTCTTCATTTGGTGCTCCGTCTGAGAGGAGG 1633037 >seq61 Length=1440766 Score = 113 bits (124), Expect = 3e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||| ||||| || || || |||||||| || || || | | Sbjct 1073428 ATGCAAATTTTCGTGAAAACACTCACTGGTAAGACCATCACTCTTGAGGTCGAGAGCTCT 1073487 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| |||| |||| | | |||| ||||| | || || || || Sbjct 1073488 GACACCATCGACAATGTTAAGGCAAAGA-TCCAGGACAGGGAAGGCATTCCTCCGGACCA 1073546 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | || || || ||||| ||||| || ||||| | ||||| || | ||||||||| Sbjct 1073547 GCAAAGATTGATCTTCGCCGGTAAACAGCTTGAAGATGGCCGCACCTTGGCCGATTACAA 1073606 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || ||||||||||| | ||||| ||| Sbjct 1073607 CATCCAGAAAGAGTCCACCCTCCATTTGGTT 1073637 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || || || || |||||| | || ||||| | | Sbjct 1074111 ATGCAGATTTTTGTGAAGACCCTAACCGGCAAGACTATCACTTTGGAGGTTGAGAGCTCA 1074170 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || ||| ||| ||||| ||||| | || ||||| || Sbjct 1074171 GACACAATCGATAACGTCAAGGCAAAGATTCAAGACAAGGAAGGGATCCCACCAGACCAG 1074230 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || |||||||| ||||| || ||||||| ||| || | | ||||||||| Sbjct 1074231 CAGAGACTCATCTTTGCCGGGAAACAGCTTGAAGACGGACGTACCCTCGCTGATTACAAC 1074290 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||||||||| || Sbjct 1074291 ATCCAAAAAGAGTCTAC 1074307 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || || || || |||||| || ||||| | | Sbjct 1074339 ATGCAGATTTTTGTGAAGACCCTTACCGGCAAGACCATCACTTAAGAGGTTGAGAGCTCA 1074398 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| || ||||| | || ||| ||||| ||||| | || ||||| || Sbjct 1074399 GACACTATTGATAACGTTAAAGC-CAAGATTCAGGACAAGGAAGGGATCCCACCAGACCA 1074457 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || || || ||||| || || || | || ||| | | |||||||| Sbjct 1074458 GCAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGGACTCTTGCAGATTACAA 1074517 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||| || | || || ||| Sbjct 1074518 CATCCAGAAGGAGTCTACCCTTCACTTGGTT 1074548 >seq6139 Length=4094 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| |||||||| || ||||| ||||| |||||||| || || | Sbjct 550 ATGCAGATTTTCGTCAAAACCCTAACCGGAAAGACGATTACTCTCGAGGTGGAGAGTTCT 491 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || ||||| | || | | ||||| || ||| | || || || || Sbjct 490 GACACCATCGACAACGTTAAAGCCAAGA-TCCAAGACAAGGAGGGTATCCCTCCGGACCA 432 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || ||||| || ||||| || |||| | || | | ||||||||| Sbjct 431 GCAGAGGTTGATCTTCGCCGGAAAGCAACTCGAGGACGGCAGAACCCTTGCCGATTACAA 372 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || |||||||| | ||| | ||| | ||| | || ||||| Sbjct 371 CATCCAGAAGGAGTCCACCCTTCATCTTGTTCTCAGGCTTCGTGGAGG 324 >seq99 Length=1465915 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| |||||||| || ||||| ||||| |||||||| || || | Sbjct 434836 ATGCAGATTTTCGTCAAAACCCTAACCGGAAAGACGATTACTCTCGAGGTGGAGAGTTCT 434777 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || ||||| | || | | ||||| || ||| | || || || || Sbjct 434776 GACACCATCGACAACGTTAAAGCCAAGA-TCCAAGACAAGGAGGGTATCCCTCCGGACCA 434718 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || ||||| || ||||| || |||| | || | | ||||||||| Sbjct 434717 GCAGAGGTTGATCTTCGCCGGAAAGCAACTCGAGGACGGCAGAACCCTTGCCGATTACAA 434658 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || |||||||| | ||| | ||| | ||| | || ||||| Sbjct 434657 CATCCAGAAGGAGTCCACCCTTCATCTTGTTCTCAGGCTTCGTGGAGG 434610 >seq190 Length=891836 Score = 109 bits (120), Expect = 4e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || ||||| || || ||||| || ||| | |||||||| | | Sbjct 382398 AATGCAGATCTTCGTCAAGACCCTTACCGGCAAAACCATAACTTTGGAAGTTGAGAGCTC 382457 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || ||| || ||||| ||||| || | ||||| || Sbjct 382458 TGACACGATCGATAACGTGAAGGCAAAGATCCAAGACAAGGAAGGGATATCACCAGACCA 382517 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || ||||| |||||||| || ||||| | |||||| | | |||||||| Sbjct 382518 ACAGAGACTCATCTTTGCAGGCAAACAGCTCGAAGATGGCCGCACTCTTGCAGATTACAA 382577 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || |||||||| || Sbjct 382578 CATCCAGAAAGAGTCAAC 382595 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/202 (71%), Gaps = 10/202 (5%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || ||||| || || || ||||| || | Sbjct 381952 ATGCAGATATTCGTCAAGACCCTTACCGGTAAAACCATTACCCTAGAAGTCGAGAGTTCA 382011 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| ||||| | || | | ||||| ||||| | || || ||||| Sbjct 382012 GACACAATTGACAATGTTAAAGCTAAGA-TCCAAGACAAGGAAGGAATCCCTCCGGATCA 382070 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGA----CGAACGCACTTTAGGCGATT 23785 |||| | |||| || || || ||||| || || || ||||||| || || ||| Sbjct 382071 ACAGAGACTAATCTTCGCTGGTAAACAGCTTGAGGAAGGTCGAACGCT-TTCAG---ATT 382126 Query 23786 ACAACATACAAAAAGAGTCCAC 23807 ||||||| || ||||| || || Sbjct 382127 ACAACATCCAGAAAGAATCAAC 382148 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || ||||| || || ||| | |||||||| | | Sbjct 382627 ATGCAGATTTTTGTAAAGACCCTTACTGGAAAGACTATAACTTTGGAAGTTGAGAGCTCT 382686 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| ||||| | | ||||| ||| Sbjct 382687 GACACAATTGATAACGTGAAGGCCAAGATCCAAGACAAGGAAGGGATTGCACCAGACCAA 382746 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | | || ||||| || ||||| || || || | |||||| | | ||||| ||| Sbjct 382747 CAAAGACTCATTTTTGCTGGAAAACAGCTTGAGGATGGTCGCACTCTTGCAGATTATAAC 382806 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| ||||| || Sbjct 382807 ATCCAAAAGGAGTCAAC 382823 >seq411 Length=621170 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||| ||||| || || || ||||||||||| ||||| | | Sbjct 568304 ATGCAAATTTTCGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTTGAGAGCTCT 568363 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| |||| | || | | ||||| ||||| | || || ||||| Sbjct 568364 GACACCATCGACAATGTTAAGGCGAAGA-TCCAGGACAAGGAAGGCATTCCTCCGGATCA 568422 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || ||||| || ||||| | || || || | |||||||| Sbjct 568423 GCAGAGATTGATCTTCGCTGGTAAACAGCTAGAAGATGGTCGTACCTTGGCAGATTACAA 568482 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || ||||| || || | || || ||| | |||| |||| || Sbjct 568483 CATCCAGAAAGAATCGACCCTTCACTTGGTTCTCCGGTTAAGAGGTGG 568530 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| || ||||| || |||||| | || ||||| | | Sbjct 568760 ATGCAGATTTTCGTCAAGACCCTAACCGGAAAGACCATCACTTTGGAGGTTGAGAGCTCT 568819 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | |||| || ||| ||||| ||||| | |||||||| || Sbjct 568820 GACACAATCGATAATGTAAAGGCGAAGATTCAGGACAAGGAAGGGATCCCGCCAGACCAG 568879 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || || || || || || | ||| || | | |||||||| Sbjct 568880 CAGAGACTCATCTTTGCTGGGAAGCAGCTCGAGGATGGACGTACCCTTGCGGATTACAAT 568939 Query 23791 ATACAAAAAGAGTCCACATTACAT 23814 || ||||| ||||| ||| | ||| Sbjct 568940 ATCCAAAAGGAGTCTACACTCCAT 568963 >seq384 Length=798633 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || ||||| || ||| | |||||||| | | Sbjct 646548 ATGCAGATCTTCGTCAAGACCCTTACCGGCAAAACCATAACTTTGGAAGTTGAGAGCTCT 646607 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | | || ||| ||| ||||| |||||| | | ||||| ||| Sbjct 646608 GATACAATCGATAACGTGAAGGCAAAGATTCAAGACAAGGAAGGTATCCAACCAGACCAA 646667 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| |||||||| || ||||| | |||||| | | ||||||||| Sbjct 646668 CAGAGACTCATCTTTGCAGGCAAACAGCTCGAAGATGGCCGCACTCTTGCTGATTACAAC 646727 Query 23791 ATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 646728 ATCCAGAAAGAGTCAAC 646744 Score = 89.7 bits (98), Expect = 3e-13 Identities = 144/202 (71%), Gaps = 10/202 (5%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || ||||| || || || ||||| || | Sbjct 646320 ATGCAGATATTCGTCAAGACCCTTACCGGTAAAACCATTACCCTAGAAGTCGAGAGTTCA 646379 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| ||||| | || | | ||||| ||||| | || || ||||| Sbjct 646380 GACACAATTGACAATGTTAAAGCTAAGA-TCCAAGACAAGGAAGGAATCCCTCCGGATCA 646438 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGA----CGAACGCACTTTAGGCGATT 23785 |||| | |||| || || |||||||| || || || ||||||| || || ||| Sbjct 646439 ACAGAGACTAATCTTCGCTGGCAAACAGCTTGAGGATGGTCGAACGCT-TTCAG---ATT 646494 Query 23786 ACAACATACAAAAAGAGTCCAC 23807 ||||||| || ||||| || || Sbjct 646495 ACAACATCCAGAAAGAATCAAC 646516 >seq240 Length=230833 Score = 107 bits (118), Expect = 1e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || |||||| | ||||| || ||||| || || || || || || Sbjct 111037 AAAATGCAGATCTTTGTGAAAACCTTAACGGGGAAGACGATAACCCTAGAGGTAGAGTCA 111096 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | ||| | ||| || ||||| ||||| | || || || Sbjct 111097 TCAGACACGATCGACAATGTGAAAGC-AAAGATCCAAGACAAGGAAGGGATCCCACCGGA 111155 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| | || || ||||| ||||| |||||||||| | || | | ||| || Sbjct 111156 CCAGCAGCGGCTGATCTTCGCCGGGAAACAGCTGGAAGACGGGAGAACACTCGCCGACTA 111215 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| || |||||||| || | ||||| || | | || ||||||| Sbjct 111216 CAACATCCAGAAAGAGTCGACGCTTCATTTGGTGCTCCGTCTGAGAGGAGG 111266 >seq60 Length=318476 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||| ||||| || || || ||||||||||| ||||| | | Sbjct 56304 ATGCAAATTTTCGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTTGAGAGCTCT 56245 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| |||| | || | | ||||| ||||| | || || ||||| Sbjct 56244 GACACAATCGACAATGTTAAGGCGAAGA-TCCAGGACAAGGAAGGCATTCCTCCGGATCA 56186 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | || || || || || ||||| || ||||| | || || || | |||||||| Sbjct 56185 GCAAAGATTGATCTTCGCTGGTAAACAGCTAGAAGATGGTCGTACCTTGGCAGATTACAA 56126 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || |||||||| || | ||||| ||| Sbjct 56125 CATCCAGAAAGAGTCAACCCTTCATTTGGTT 56095 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || | || || ||||| ||||| ||||| ||||| | Sbjct 56076 ATGCAGATCTTTGTGAAGACGTTGACTGGCAAAACCATCACCCTCGAGGTTGAGAGTTCA 56017 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| |||| | || | | || ||||| || | || || ||||| Sbjct 56016 GACACTATTGACAATGTTAAGGCTAAGA-TCCAGGATAAAGAGGGAATCCCACCGGATCA 55958 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || |||||||| |||||| | || || | ||||| ||| || ||||| Sbjct 55957 GCAGAGACTTATCTTTGCCGGTAAACAATTAGAGGATGGTCGCACACTAGCTGACTACAA 55898 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 || || ||||||||||| | ||||| || Sbjct 55897 TATCCAGAAAGAGTCCACTCTCCATTTGGT 55868 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| || ||||| || || ||| | || ||||| | | Sbjct 55848 ATGCAGATTTTCGTGAAGACCCTAACTGGAAAGACCATTACTTTGGAGGTTGAGAGCTCT 55789 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || ||| ||||| ||||| | || ||||| || Sbjct 55788 GACACAATCGATAATGTCAAGGC-GAAGATTCAGGACAAGGAAGGGATCCCACCAGACCA 55730 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || || || || | ||| || | | |||||||| Sbjct 55729 GCAGAGACTCATCTTTGCTGGGAAGCAGCTTGAGGATGGACGTACCCTTGCTGATTACAA 55670 Query 23790 CATACAAAAAGAGTCCACATTACAT 23814 || ||||| ||||| ||| | ||| Sbjct 55669 TATCCAAAAGGAGTCTACACTCCAT 55645 >seq267 Length=1500311 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || | ||||| ||||| |||||||| || || || | | Sbjct 617730 ATGCAGATTTTTGTCAAGACTTTGACGGGCAAAACCATCACTCTAGAGGTCGAGAGCTCT 617671 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | || || ||| ||||||||||| | | || || ||| Sbjct 617670 GATACGATTGATAACGTGAAGGCCAAGATTCAAGACAAAGAAGGGATCACACCGGACCAA 617611 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || |||||||| |||||||| ||||| | |||||||||| |||||||| Sbjct 617610 CAGAGACTTATCTTTGCCGGAAAACAACTCGAAGATGGTCGCACTTTAGCAGATTACAAT 617551 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||| || || Sbjct 617550 ATCCAGAAAGAATCAAC 617534 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||||||||| || ||||| || ||||| ||||| || | | Sbjct 618186 ATGCAAATATTTGTGAAAACCCTCACTGGCAAAACCATTACTCTAGAAGTGGAGAGCTCA 618127 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | | ||||| ||||| | || || || || Sbjct 618126 GACACAATAGACAATGTCAAGGCCAAGA-TCCAAGACAAGGAAGGAATTCCTCCGGACCA 618068 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||||||||| ||||| ||||| | || || | | |||||||| Sbjct 618067 GCAGAGACTTATCTTTGCCGGCAAGCAACTCGAAGATGGTCGGACACTTGCGGATTACAA 618008 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || |||||||| ||| |||| || ||| Sbjct 618007 CATCCAGAAAGAGTCAACACTACACTTGGTT 617977 >seq134 Length=106205 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || ||||| || || ||| | || ||||| | | Sbjct 48687 ATGCAGATTTTTGTGAAGACCCTTACCGGAAAGACCATAACTTTGGAGGTTGAGAGCTCA 48628 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || ||| |||||| ||||| | || ||||| || Sbjct 48627 GACACAATTGATAACGTCAAGGCTAAGATTCATGACAAGGAAGGAATCCCACCAGACCAG 48568 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || ||||| || ||||| | ||||| | | ||||||||| Sbjct 48567 CAGAGACTCATCTTTGCTGGGAAACAGCTTGAAGATGGTCGCACCCTTGCTGATTACAAC 48508 Query 23791 ATACAAAAAGAGTCCACATTACAT 23814 || ||||| ||||| || ||||| Sbjct 48507 ATCCAAAAGGAGTCTACTCTACAT 48484 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || ||||| || || ||| | || ||||| | | Sbjct 48915 ATGCAGATTTTTGTGAAGACCCTTACCGGAAAGACCATAACTTTGGAGGTTGAGAGCTCA 48856 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || ||| ||||| ||||| | || ||||| || Sbjct 48855 GACACAATTGATAACGTCAAGGCTAAGATTCAGGACAAGGAAGGAATCCCACCAGACCAG 48796 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || ||||| || ||||| | ||||| | | || |||||| Sbjct 48795 CAGAGACTCATCTTTGCTGGGAAACAGCTTGAAGATGGTCGCACCCTTGCTGACTACAAC 48736 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || ||||| ||||| || | ||||| || Sbjct 48735 ATCCAAAAGGAGTCTACTCTCCATTTGGT 48707 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || | || || ||||| || ||| | || ||||| | | Sbjct 49143 ATGCAGATCTTTGTGAAGACATTGACTGGCAAAACCATTACTTTGGAGGTTGAGAGCTCT 49084 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| ||||| | || | || ||||| ||||| | || || ||||| Sbjct 49083 GATACTATTGACAATGTTAAAGCTAAGA-TTCAGGACAAGGAAGGGATTCCTCCGGATCA 49025 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || | || || | ||||| | | |||||||| Sbjct 49024 GCAGAGGCTTATCTTTGCTGGTAAGCAGTTAGAGGATGGTCGCACACTTGCTGATTACAA 48965 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||||||||| || Sbjct 48964 CATTCAAAAAGAGTCTAC 48947 >seq325 Length=1091643 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || | ||||| ||||| |||||||| ||||| || | | Sbjct 552524 ATGCAGATTTTTGTCAAGACTTTGACGGGCAAAACCATCACTCTAGAAGTCGAGAGCTCT 552583 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | || || ||| ||||||||||| | | || || || Sbjct 552584 GATACGATTGATAACGTGAAGGCCAAGATTCAAGACAAAGAAGGGATCACACCGGACCAG 552643 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | |||| |||||||| |||||||| ||||| | || || | | ||||||||| Sbjct 552644 CAGAGACTAATCTTTGCCGGGAAACAACTCGAAGATGGTCGAACACTTGCCGATTACAAT 552703 Query 23791 ATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 552704 ATCCAGAAAGAGTCGAC 552720 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || ||||| ||||| || || || || || ||||| |||||||| | | Sbjct 552068 ATGCAAATCTTTGTTAAGACCCTTACTGGCAAGACCATAACTCTTGAAGTTGAAAGCTCT 552127 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || | | ||||| ||||| | | || || || Sbjct 552128 GACACGATTGACAATGTCAAGGCCAAGA-TCCAAGACAAGGAAGGCATCACTCCGGACCA 552186 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||||||||| ||||| || || | || || | | |||||||| Sbjct 552187 GCAGAGACTTATCTTTGCCGGCAAGCAACTCGAGGATGGTCGGACACTTGCGGATTACAA 552246 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || |||||||| || | ||||| ||| Sbjct 552247 CATCCAGAAAGAGTCAACTCTGCATTTGGTT 552277 >seq233 Length=166549 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || ||||| || || ||| | || ||||| | | Sbjct 103776 ATGCAGATTTTTGTGAAGACCCTTACCGGAAAGACCATAACTTTGGAGGTTGAGAGCTCA 103835 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || ||| ||||| ||||| | || ||||| ||| Sbjct 103836 GACACAATTGATAACGTCAAGGCTAAGATTCAGGACAAGGAAGGAATCCCACCAGACCAA 103895 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || ||||| | ||||| | ||||| | | ||||||||| Sbjct 103896 CAGAGACTCATCTTTGCTGGGAAACAGATTGAAGATGGTCGCACCCTTGCTGATTACAAC 103955 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| ||||| || Sbjct 103956 ATCCAAAAGGAGTCTAC 103972 >seq75 Length=1220249 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 |||||||| ||| |||| || |||||||| | | || ||||| || || ||||| ||| Sbjct 48540 GACAAAGAGGGTATACCACCTGATCAACAAAGGCTGATCTTTGCTGGTAAGCAACTCGAA 48599 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | || || || | ||||||||||| || |||||||| || | ||| | || || Sbjct 48600 GATGGCCGAACCTTGGCTGATTACAACATCCAGAAAGAGTCTACTCTTCATCTTGTCTTG 48659 Query 23824 AGGTTGCGAGGAGGA 23838 ||| || |||| ||| Sbjct 48660 AGGCTGAGAGGTGGA 48674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337975877838488