Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq69 143 2e-29 seq380 134 1e-26 seq525 125 7e-24 seq270 122 8e-23 seq6139 111 1e-19 seq454 111 1e-19 seq99 111 1e-19 seq244 102 8e-17 seq177 102 8e-17 seq82 98.7 9e-16 seq411 89.7 5e-13 seq134 89.7 5e-13 seq61 89.7 5e-13 seq60 89.7 5e-13 >seq69 Length=1777342 Score = 143 bits (158), Expect = 2e-29 Identities = 174/232 (75%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||||||| ||||| |||||||| ||||| ||||||| Sbjct 335981 CCACCACGGAGACGGAGCACCAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCC 336040 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754 || ||||| |||| || |||||||| ||||||||||||| ||||| |||||| | ||| Sbjct 336041 AGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCGAATATCAACCGCTGCTGGTCCGGTGGG 336100 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | || ||||||| | || | || |||| || | | | ||||| |||||||| Sbjct 336101 ATCCCT-TCCTTGT-CTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGACGACTCCA 336158 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | ||||| || || ||||| || || || ||||| |||||||| || Sbjct 336159 CCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 336210 >seq380 Length=167695 Score = 134 bits (148), Expect = 1e-26 Identities = 172/232 (74%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||||||| ||||| |||||||| ||||| ||||| | Sbjct 104817 CCACCACGGAGACGGAGCACCAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCCGCC 104876 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754 || ||||| |||| || |||||||| ||||||||||||| ||||| |||||| | ||| Sbjct 104877 AGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCGAATATCAACCGCTGCTGGTCCGGTGGG 104936 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | || ||||||| | || | || |||| || | | | ||||| |||||| | Sbjct 104937 ATCCCT-TCCTTGT-CTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGACGACTCGA 104994 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | ||||| || || ||||| || || || ||||| |||||||| || Sbjct 104995 CCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 105046 >seq525 Length=802623 Score = 125 bits (138), Expect = 7e-24 Identities = 170/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || ||||| ||||||||| ||||| ||||||| Sbjct 20297 CCACCACGGAGACGGAGGACAAGGTGAAGCGTTGACTCCTTCTGGATGTTGTAGTCGGCT 20356 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754 | ||| || |||| ||||||||||| |||||||| |||| ||||| |||||| ||||| Sbjct 20357 AAGGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGCGGG 20416 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||||||||| ||| || |||| || | | | ||||| ||||| | Sbjct 20417 ATTCCT-TCCTTGTCCTGGATCTTGGCCTTC-ACATTGTCGATGGTGTCAGATGACTCTA 20474 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | || ||||| || ||||| || || || ||||| |||||||| || Sbjct 20475 CCTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 20526 >seq270 Length=1109440 Score = 122 bits (134), Expect = 8e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || ||||| ||||||||| ||||| ||||||| Sbjct 20314 CCACCACGGAGACGGAGGACAAGGTGAAGCGTTGACTCCTTCTGGATGTTGTAGTCGGCT 20373 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| || |||| ||||||||||| |||||||| |||| ||||| ||||||| || Sbjct 20374 AAGGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGG 20433 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| || |||| || | | | ||||| ||||| || Sbjct 20434 ATTCCTTCCTTGTCCTGGATCTTGGCCTTC-ACATTGTCGATGGTGTCAGATGACTCTAC 20492 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||| | || ||||| || ||||| || || || ||||| |||||||| || Sbjct 20493 CTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 20543 >seq6139 Length=4094 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || ||| ||||||||| ||||| || |||| ||||| | |||| ||| Sbjct 342 ACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTCG 401 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || ||||| |||||||| |||| | ||| ||||||| || | | ||||||||| | Sbjct 402 AGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGG 461 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || |||| |||| | | | ||||| ||||||||| | || ||||| || Sbjct 462 ATCTTG-GCTTTAACGTTGTCGATGGTGTCAGAACTCTCCACCTCGAGAGTAATCGTCTT 520 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || |||||||||||||| Sbjct 521 TCCGGTTAGGGTTTTGACGAAAATCTGCAT 550 >seq454 Length=111167 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || ||| |||||||||||||| ||||| | Sbjct 50113 CCACCACGGAGACGGAGGACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCC 50172 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || |||||||| || ||||| || || ||||| ||||||| || Sbjct 50173 AGTGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 50232 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||| ||| ||| || |||| ||| | | | |||||| ||| || Sbjct 50233 ATGCCTTCCTTATCCTGGATCTTGGCCTTC-ACGTTGTCAATGGTGTCGGAGCTCTCAAC 50291 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || |||| |||||| || ||||||||||| Sbjct 50292 CTCAAGGGTGATGGTCTTCCCGGTCAACGTCTTCACAAAAATCTGCAT 50339 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || |||||||| || ||||||||| ||||| ||||| | | || | |||| ||| Sbjct 50815 ACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTCCTGCCGTCCTCG 50874 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || ||||| |||||||| |||| | ||| ||||||| ||| | | |||||||||| | Sbjct 50875 AGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGG 50934 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || ||| |||| | | | ||||| ||||||||||| || || || || Sbjct 50935 ATCTTGGCCTT-AACGTTGTCGATGGTGTCAGAACTCTCCACCTCCAAAGTGATAGTCTT 50993 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||||||||| ||||| || ||||| Sbjct 50994 TCCGGTCAGCGTCTTCACGAAGATTTGCAT 51023 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || |||| || || || ||||||||||||||||||||| | Sbjct 50569 CCTCCACGGAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTATAGTCAGCC 50628 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || | |||| || || ||||| || ||||| |||| | ||| ||||| | || Sbjct 50629 AAAGTCCTGCCGTCTTCAAGTTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGTGGT 50688 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | |||||| | | ||| |||| |||| || | | | ||||| ||| ||| Sbjct 50689 ATTCCCTCCTTAT-CTTGAATTTTAGCTTTGACATTGTCGATGGTGTCAGAGCT---CTC 50744 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || || || || || || || || ||||| |||||||| Sbjct 50745 CACCTCCAAAGTAATAGTCTTTCCAGTAAGGGTTTTGACGAAGATCTGCAT 50795 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || || ||||||||| ||||| ||||| | | ||||| | || || Sbjct 50359 ACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCA 50418 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| ||||| ||||| || || | ||| ||||||| || | | ||||||||| | Sbjct 50419 AGCTGTTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGG 50478 Query 41774 ATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || ||||| || || | |||| ||| ||||||| || || || || Sbjct 50479 ATCTTGGCCTTCA-CGTTATCAATGGTGTCTGAACTCTCAACCTCCAAGGTAATTGTCTT 50537 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || ||||| |||||||||||||| Sbjct 50538 GCTGGTGAGAGTCTTGACGAAAATCTGCAT 50567 >seq99 Length=1465915 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || ||| ||||||||| ||||| || |||| ||||| | |||| ||| Sbjct 434628 ACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTCG 434687 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || ||||| |||||||| |||| | ||| ||||||| || | | ||||||||| | Sbjct 434688 AGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGG 434747 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || |||| |||| | | | ||||| ||||||||| | || ||||| || Sbjct 434748 ATCTTG-GCTTTAACGTTGTCGATGGTGTCAGAACTCTCCACCTCGAGAGTAATCGTCTT 434806 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || |||||||||||||| Sbjct 434807 TCCGGTTAGGGTTTTGACGAAAATCTGCAT 434836 >seq244 Length=507168 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || ||| |||||||||||||| ||||| | Sbjct 235906 CCACCACGGAGACGGAGGACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCC 235965 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || |||||||| || ||||| || || ||||| ||||||| || Sbjct 235966 AGTGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 236025 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||| ||| ||| || |||| ||| | | | |||||| ||| || Sbjct 236026 ATGCCTTCCTTATCCTGGATCTTGGCCTTC-ACGTTGTCAATGGTGTCGGAGCTCTCAAC 236084 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| || || |||||||| Sbjct 236085 CTCAAGGGTGATGGTCTTCCCGGTGAGAGTCTTAACAAAGATCTGCAT 236132 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || || ||||||||| ||||| ||||| | | || | |||| ||| Sbjct 236608 ACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTCCTGCCGTCCTCG 236667 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || ||||| |||||||| |||| | ||| ||||||| ||| | | |||||||||| | Sbjct 236668 AGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGG 236727 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || ||| |||| | | | ||||| ||| ||||||| || || || || Sbjct 236728 ATCTTGGCCTT-AACGTTGTCGATGGTGTCAGAACTCTCTACCTCCAAAGTGATAGTCTT 236786 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||||||||| ||||| || ||||| Sbjct 236787 TCCGGTCAGCGTCTTGACGAAGATTTGCAT 236816 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || | || ||||| || || || ||||||||| ||||| ||||| | Sbjct 236134 CCACCACGAAGCCTTAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCC 236193 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| | || || ||||| ||||| ||||| || || | ||| ||||||| || Sbjct 236194 AATGTGCGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGG 236253 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTC---GCTCGACTC 41811 | | ||||||||| ||| || ||||| || || | |||| |||| || Sbjct 236254 ATTCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTATCAATGGTGTCTGAGCTC---TC 236309 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| ||||| || || || || || ||||| |||||||||||||| Sbjct 236310 AACCTCCAAGGTTATTGTCTTGCCGGTGAGAGTCTTGACGAAAATCTGCAT 236360 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || |||| || || || ||||||||| ||||||||||| | Sbjct 236362 CCTCCACGGAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGGATGTTATAGTCAGCC 236421 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || | |||| || || ||||| || ||||| |||| | ||| ||||| | || Sbjct 236422 AAAGTCCTGCCGTCTTCAAGTTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGTGGG 236481 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | |||||| | | ||| |||| |||| || | | | ||||| ||| ||| Sbjct 236482 ATACCCTCCTTAT-CTTGAATTTTAGCTTTGACATTGTCGATGGTGTCAGAGCT---CTC 236537 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || || || || || || || || ||||| |||||||| Sbjct 236538 CACCTCCAAAGTAATAGTCTTTCCAGTAAGGGTTTTGACGAAGATCTGCAT 236588 >seq177 Length=445524 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || ||| ||||||||| ||||| || |||| ||||| | |||| ||| Sbjct 392217 ACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTCG 392158 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || ||||| |||||||| |||| | ||| ||||||| || | | ||||||||| | Sbjct 392157 AGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGG 392098 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || ||| | || | | | ||||| ||||||||||| || || || || Sbjct 392097 ATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAACTCTCCACCTCCAAGGTGATAGTCTT 392039 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || |||||||||||||| Sbjct 392038 TCCGGTTAGGGTTTTGACGAAAATCTGCAT 392009 >seq82 Length=470516 Score = 98.7 bits (108), Expect = 9e-16 Identities = 165/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| ||||| || || |||||| || ||||| || || | | Sbjct 87418 CCACCACGGAGACGAAGCACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCAGCG 87477 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC-GGG 41754 |||||||| |||| |||||||| || || || || || || | ||| ||||| | ||| Sbjct 87478 AGGGTGCGTCCGTCTTCGAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 87537 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | || |||||||| ||| | ||||| | ||| | | ||||| |||| | Sbjct 87538 ATCCCT-TCCTTGTCT-TGAATCTTTGCCTTGACGTTATCGATTGTGTCTGAGCTC---T 87592 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||||| || || || || || || || ||||| || ||||||||||| Sbjct 87593 CAACCTCCAAAGTGATAGTCTTGCCGGTTAGGGTCTTCACAAAAATCTGCAT 87644 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | |||| || || || ||||||||| ||||| || || | Sbjct 87190 CCGCCACGAAGACGAAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCTGCA 87249 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC-GGG 41754 || || || | || || ||||| || || ||||| || || | ||| ||||| | ||| Sbjct 87250 AGAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGG 87309 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTC---GCTCGACT 41810 | | || ||||||||| ||| | || |||| |||| || |||||| |||| | Sbjct 87310 ATCCCT-TCCTTGTCC-TGAATCTTGGCTTTAACGTTATCAATAGTGTCTGAGCTC---T 87364 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||||| || || || || || || || ||||| || ||||||||||| Sbjct 87365 CAACCTCCAAAGTGATGGTCTTGCCGGTAAGGGTCTTCACAAAAATCTGCAT 87416 >seq411 Length=621170 Score = 89.7 bits (98), Expect = 5e-13 Identities = 163/232 (70%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| ||||| || || |||||| || || || || || | Sbjct 568986 CCACCACGAAGACGAAGCACAAGATGGAGTGTAGACTCCTTTTGGATATTGTAATCCGCA 568927 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 ||||| || | || ||||||||||| || || || || || | ||| ||||| ||||| Sbjct 568926 AGGGTACGTCCATCCTCGAGCTGCTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGCGGG 568867 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | || ||||||||| ||| | || || | || | | ||||| ||| || Sbjct 568866 ATCCCT-TCCTTGTCC-TGAATCTTCGCCTTTACATTATCGATTGTGTCAGAGCT---CT 568812 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||||| || || || || || || || ||||| |||||||||||||| Sbjct 568811 CAACCTCCAAAGTGATGGTCTTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 568760 >seq134 Length=106205 Score = 89.7 bits (98), Expect = 5e-13 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| ||| || || |||||| || ||||| ||||| | |||||||| Sbjct 48698 AGACGAAGCACCAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGCAAGGGTGCGA 48757 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||| || || || || || || | ||| ||||| | || | | ||| Sbjct 48758 CCATCTTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATTCCTTCC 48817 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTCCACCTCCACC 41821 |||||| ||| | || || | ||| || | ||| || || ||| ||||||| Sbjct 48818 TTGTCC-TGAATCTTAGCCTTGACGTTATCA-ATTGTGTCT-GAGCTCTCAACCTCCAAA 48874 Query 41822 GTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || ||||| || ||||||||||| Sbjct 48875 GTTATGGTCTTTCCGGTAAGGGTCTTCACAAAAATCTGCAT 48915 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| ||||| || || |||||| || ||||| || || | Sbjct 48461 CCACCACGAAGACGAAGCACAAGATGTAGAGTAGACTCCTTTTGGATGTTGTAATCAGCA 48520 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||| || || || || || || | ||| ||||| | || Sbjct 48521 AGGGTGCGACCATCTTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 48580 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTCC 41812 | | |||||||| |||| | || || | ||| || | ||| || || ||| Sbjct 48581 ATTCCTTCCTTGTC-ATGAATCTTAGCCTTGACGTTATCA-ATTGTGTCT-GAGCTCTCA 48637 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| ||||| || || || || || ||||| || ||||||||||| Sbjct 48638 ACCTCCAAAGTTATGGTCTTTCCGGTAAGGGTCTTCACAAAAATCTGCAT 48687 >seq61 Length=1440766 Score = 89.7 bits (98), Expect = 5e-13 Identities = 163/232 (70%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || |||||||| || ||| || || ||||| || || | | Sbjct 1074337 CCACCACGGAGACGAAGCAAGAGATGCAGGGTAGACTCTTTTTGGATGTTGTAATCAGCG 1074278 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC-GGG 41754 ||||| || |||| || ||||| || ||||| || || || | ||| ||||| | ||| Sbjct 1074277 AGGGTACGTCCGTCTTCAAGCTGTTTCCCGGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 1074218 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | || |||||||| ||| | ||||| | ||| | | ||||| |||| | Sbjct 1074217 ATCCCT-TCCTTGTCT-TGAATCTTTGCCTTGACGTTATCGATTGTGTCTGAGCTC---T 1074163 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||||| || || || || || || || ||||| || ||||||||||| Sbjct 1074162 CAACCTCCAAAGTGATAGTCTTGCCGGTTAGGGTCTTCACAAAAATCTGCAT 1074111 >seq60 Length=318476 Score = 89.7 bits (98), Expect = 5e-13 Identities = 163/232 (70%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||||||||| ||||| | Sbjct 55394 CCACCACGAAGACGAAGAACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCTGCA 55453 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754 ||||| || | || || ||||| || || ||||| || || | ||| |||||| | ||| Sbjct 55454 AGGGTACGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGG 55513 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | || ||||||||| ||| | || || | ||| | | ||||| ||| || Sbjct 55514 ATCCCT-TCCTTGTCC-TGAATCTTAGCCTTGACGTTATCTATTGTGTCTGAGCT---CT 55568 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||||| || || ||||| || || || ||||| || || || ||||| Sbjct 55569 CAACCTCCAGAGTAATGGTTTTTCCAGTAAGGGTCTTCACAAAGATTTGCAT 55620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462256694743200