Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20rubella_20[refseq_20GCF_5F000375325.1_202013-04-23] 773 sequences; 133,063,876 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5 199 4e-46 seq6 107 2e-18 seq1 104 2e-17 seq7 95.1 1e-14 seq2 93.3 4e-14 seq4 82.4 7e-11 >seq5 Length=13709650 Score = 199 bits (220), Expect = 4e-46 Identities = 591/894 (66%), Gaps = 32/894 (4%) Strand=Plus/Minus Query 57537 AGATT-TGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGA 57595 ||||| ||| ||||| || || | || ||| | || ||| | |||||||| || || || Sbjct 2138773 AGATTCTGT-ATGTTCCCAATCCACTACCCACAGATCTGGGAGATGTACAAGAAAGCCGA 2138715 Query 57596 AGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTC 57655 |||||| || ||||||| ||||||||||| || || | || |||||||||| Sbjct 2138714 AGCATCCTTCTGGACCGCTGAAGAAGTAGATCTCTCACAAGACAACCGCGATTGGGAGAA 2138655 Query 57656 C---CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATC 57712 | ||||| || || | | || || |||||||| | || || ||||| ||||| Sbjct 2138654 CAGTCTCAACGACGGCGAACGTCACTTCATCAAACACGTCCTCGCTTTCTTCGCTGCATC 2138595 Query 57713 CGATGGTATTGTTAACGAGAATTTGG----TCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768 ||| || || ||| |||||| | | ||| || | | || || ||||| Sbjct 2138594 CGACGGAATCGTTTTAGAGAATCTCGCTTCTCGGTTCATGTCC----GATGTCCAAGTCT 2138539 Query 57769 CGGAGGCGAGATGCTTT-TACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827 |||||||| | |||||| ||||| || || | || ||||| || | ||||| || ||| Sbjct 2138538 CGGAGGCGCG-TGCTTTCTACGGTTTCCAGATCGCGATTGAGAATATTCATTCTGAGATG 2138480 Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAAC 57887 ||| || || ||||||| ||| | || || ||| | |||| | || ||| | Sbjct 2138479 TATAGTCTTCTTCTCGATACTTACATCAAAGATAACAAAGAGAGAGACCATCTCTTCCGC 2138420 Query 57888 GCGATCGAAACAATGCC-CGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946 ||||| || || || || ||| |||| ||||| || ||||| | || |||||||| | Sbjct 2138419 GCGATTGAGACGATTCCTTGCG-TCGCGAAGAAAGCTCAGTGGGCGATGAAATGGATCGA 2138361 Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006 || | || || || || | | | || ||||| || |||||||| || Sbjct 2138360 ---CGGATCTCAGACCTTTGCTGAACGAATCGTTGCTTTCGCTTGTGTTGAAGGTATCTT 2138304 Query 58007 CTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCC 58065 ||| || || ||||| ||| | || || ||| | |||||||| || || ||||| || Sbjct 2138303 CTTCTCCGGAAGCTTCTGC-TCCATCTTCTGGCTTAAGAAACGAGGACTCATGCCTGGGT 2138245 Query 58066 TGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCC 58125 | || || ||||| ||||| || || ||||| || | || || || ||||||| Sbjct 2138244 TAACTTTCTCAAACGAATTGATCTCTCGAGACGAAGGCTTACACTGCGACTTCGCGTGCC 2138185 Query 58126 TAATGTACTCTCACATTGTCAATA--AACCGACGCG-GGATCGCATCTTGGACATTATCA 58182 | || ||| | | || |||| | || | ||| || ||| | | || | Sbjct 2138184 TTATCTACACGC---TTCTCAAAACGAAGCTTAGCGAAGAGCGCGTGAAGTCGATCGTAT 2138128 Query 58183 CCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCG 58242 ||| ||||| | |||||| | |||||||| ||| || || || || || | | Sbjct 2138127 GCGACGCGGTGGAGATCGAGAGGGAGTTTGTGTGCGACGCGCTTCCTTGCGCGTTGGTTG 2138068 Query 58243 GTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCG 58302 | |||||| | ||||||||| |||| ||||||||||| || || || |||||| | Sbjct 2138067 GGATGAACCAGGATTTGATGAGTCAGTATATTGAGTTTGTAGCGGATAGGCTTTTGGGTG 2138008 Query 58303 AACT--GATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGAT 58360 || | | | || || || || ||||| ||||||| ||| | || || Sbjct 2138007 CGCTTGGGTACGGGAAGGT--GTATGGTGTGACTAATCCTTTTGATTGGATGGAACTTAT 2137950 Query 58361 CTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414 |||||| | || ||||| ||||| ||||| ||| ||| |||| || ||||| Sbjct 2137949 CTCGCTTCAAGGGAAGACGAACTTCTTCGAGAAACGCGTTGGCGATTACCAAAA 2137896 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || || || || || ||| | || || || | Sbjct 13270368 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTGGAGTC 13270427 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||| |||| |||| | || ||| || || ||||||||||| | || || || Sbjct 13270428 GTCAGACACGATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGGATCCCACCGGA 13270487 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| | |||||||| || || ||| |||||||| ||| || ||| || Sbjct 13270488 CCAGCAGCGGTTGATATTCGCCGGGAAGCAGCTGGAAGACGGCCGCACTCTGGCCGACTA 13270547 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || |||||||| ||||||||||| || Sbjct 13270548 CAACATCCAGAAGGAATCGACGCTTCATCTGGTGCT 13270583 >seq6 Length=16577294 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| || || ||||| || ||||| | || ||||| || Sbjct 6990196 ATGCAAATTTTTGTGAAGACCCTTACCGGCAAGACCATCACTTTGGAGGTTGAGAGCTCA 6990137 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || |||| | || | ||| | |||||||||||| | || || ||||| Sbjct 6990136 GACACTATTGATAACGTTAAAGCCAAGATTCA-GGACAAGGAAGGGATCCCACCAGACCA 6990078 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || |||||||| |||||| | || || | |||| | ||||| || Sbjct 6990077 GCAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGGACTCTTGCAGATTACAA 6990018 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTAG 31422 ||| || || || || |||||||| |||| ||| | || | ||||| || Sbjct 6990017 CATCCAGAAGGAGTCTACTCTTCACTTGGTTCTTCGTCTTCGTGGCGGAAG 6989967 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||| |||||||||| || ||||| | || ||||| || Sbjct 8339661 ATGCAAATCTTTGTGAAGACTTTGACAGGCAAGACTATCACGTTGGAGGTTGAGAGCTCA 8339720 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | ||| ||||||||||| | || || |||||| Sbjct 8339721 GACACCATTGACAACGTCAAGGCCAAGATACAAGACAAGGAAGGGATCCCTCCGGACCAG 8339780 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || |||||||| |||||| | || || | ||| || ||||| ||| Sbjct 8339781 CAGAGACTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCGGACACTGGCAGATTACAAC 8339840 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || || ||||||||||| |||| ||| Sbjct 8339841 ATCCAGAAGGAGTCGACTCTTCACTTGGTTCTT 8339873 Score = 98.7 bits (108), Expect = 9e-16 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| || || || || || ||||| | || ||||| || Sbjct 735107 ATGCAAATCTTTGTGAAGACCCTCACCGGAAAGACCATCACTTTGGAGGTTGAGAGCTCA 735048 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | ||| |||||||||||| | || || |||||| Sbjct 735047 GACACAATCGACAACGTCAAAGCTAAAATTCAGGACAAGGAAGGGATCCCACCAGACCAG 734988 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGC-GATTATA 31370 ||| | || || |||||||| || ||| | ||||| | | | || | ||| ||||| | Sbjct 734987 CAGAGACTCATCTTCGCTGGGAAGCAGCTCGAAGA-TGGACGCACCCT-AGCGGATTACA 734930 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||| || || || ||||||||||| |||| ||| Sbjct 734929 ACATCCAGAAGGAGTCGACTCTTCACTTGGTCCTT 734895 Score = 98.7 bits (108), Expect = 9e-16 Identities = 166/234 (71%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||| || ||||| || |||||| |||| ||||| || Sbjct 735563 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTTGAGAGCTCT 735504 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | ||||| || ||| | |||||||||||| | || || ||||| Sbjct 735503 GACACTATCGACAACGTCAAGGCAAAGA-TCCAGGACAAGGAAGGTATCCCTCCGGACCA 735445 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTT---GGAAGACTCTATGACTATGAGC-GATT 31367 ||| | || || || || || || ||| | ||| | | || ||| ||| || | Sbjct 735444 ACAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGCCGTA-CACT---AGCTGACT 735389 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | ||||| || ||||| || || |||||| |||| ||| | ||||| || |||| Sbjct 735388 ACAACATCCAGAAAGAGTCCACCCTTCATTTGGTGCTTCGTCTGAGAGGTGGTA 735335 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| |||| || || || |||||| | || ||||| ||| Sbjct 2562836 ATGCAGATTTTTGTGAAGACGTTGACCGGGAAGACCATCACCCTTGAGGTTGAGAGCTCC 2562777 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || ||| ||||||||| | || || |||||| Sbjct 2562776 GACACCATTGACAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCAG 2562717 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||| | || ||| | || || || || ||| Sbjct 2562716 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGACGGTCGCACACTGGCAGACTACAAC 2562657 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || |||||||| ||||| |||| || Sbjct 2562656 ATTCAGAAGGAATCGACCCTTCACTTGGTCCT 2562625 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || || || ||||| || ||||| |||| ||||| || Sbjct 8338977 ATGCAAATTTTCGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTTGAGAGCTCT 8339036 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || || || ||||||||||||| | || || || ||| Sbjct 8339037 GACACCATTGACAATGTTAAGGCGAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAG 8339096 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || |||||||| |||||| | ||||| || || ||||| ||| Sbjct 8339097 CAAAGATTGATCTTCGCTGGTAAACAGCTAGAAGATGGCCGTACCTTGGCAGATTACAAC 8339156 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || ||||| || || |||||| |||| || | ||||| || |||| Sbjct 8339157 ATCCAGAAAGAGTCAACCCTTCATTTGGTTCTCCGGCTGAGAGGTGGTA 8339205 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||||| || ||||| || || ||| | || ||||| || Sbjct 2563064 ATGCAGATTTTTGTCAAGACTCTCACCGGCAAGACAATAACCTTGGAGGTTGAGAGCTCA 2563005 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||||||| | || || |||||| Sbjct 2563004 GACACCATTGATAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAG 2562945 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||||||||||||| | || || | || || || || ||| Sbjct 2562944 CAGAGGCTCATCTTCGCTGGCAAACAGCTTGAGGATGGTCGCACATTGGCTGACTACAAC 2562885 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || ||||| |||||||| || || || || | || |||| Sbjct 2562884 ATCCAGAAGGAGTCGACCCTTCATCTTGTTCTCAGGCTCCGTGGTGGTA 2562836 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| |||||||| || || ||||| || ||||| | || ||||| || Sbjct 6990424 ATGCAGATTTTTGTAAAGACCCTAACCGGCAAGACTATCACTTTGGAGGTTGAGAGCTCA 6990365 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || ||| | | |||||||||| | || || ||||| Sbjct 6990364 GACACAATCGATAACGTCAAGGCAAAGATTCAAG-ACAAGGAAGGGATCCCACCAGACCA 6990306 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || || || |||||| | |||||| || | ||||| || Sbjct 6990305 GCAGAGACTCATCTTTGCCGGGAAACAGCTTGAAGACGGACGTACCCTCGCTGATTACAA 6990246 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| |||||||| || || || ||||| || ||| | || | || |||| Sbjct 6990245 CATCCAAAAAGAGTCTACCCTGCATCTCGTGCTTCGTCTCCGTGGTGGTA 6990196 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| || || || ||||| | || || || ||| Sbjct 14991069 ATGCAGATCTTTGTCAAGACCTTGACCGGGAAGACCATCACACTGGAAGTGGAGAGCTCC 14991128 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||||||| | || || |||||| Sbjct 14991129 GACACCATTGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAG 14991188 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||||||| | || || | ||| || || || ||| Sbjct 14991189 CAGCGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGTCGCACTTTGGCTGACTACAAC 14991248 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| || || || |||||||| || || Sbjct 14991249 ATCCAAAAGGAGTCTACCCTTCATCTCGTCCT 14991280 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| || || ||||| || ||||| | || || || || Sbjct 735335 ATGCAGATTTTTGTCAAGACCCTAACCGGCAAGACCATCACTTTGGAGGTGGAGAGCTCT 735276 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | || |||||||||||| | || || |||||| Sbjct 735275 GACACAATCGACAACGTCAAAGCCAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAG 735216 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGC-GATTATA 31370 ||| | || || |||||||| || ||| | ||||| | | | || | ||| ||||| | Sbjct 735215 CAGAGACTCATCTTCGCTGGGAAGCAGCTCGAAGA-TGGACGCACCCT-AGCGGATTACA 735158 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||| || || || || || ||||| |||| ||| | || | || |||| Sbjct 735157 ACATCCAGAAGGAGTCTACCCTTCACTTGGTGCTTCGTCTCCGTGGTGGTA 735107 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || || || || ||||| || ||||| |||| || || || Sbjct 735791 ATGCAAATTTTTGTGAAAACACTAACTGGCAAGACCATCACTCTCGAGGTCGAGAGCTCA 735732 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || ||| | ||||||||||||| | || || || || Sbjct 735731 GACACCATCGACAATGTGAAGGCAAAGA-TCCAGGACAAGGAAGGCATTCCTCCGGATCA 735673 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | |||| |||||||| |||||| | ||||| || || ||||| || Sbjct 735672 GCAGAGATTAATCTTCGCTGGTAAACAGCTCGAAGATGGCCGTACCTTGGCTGATTACAA 735613 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || ||||| || || |||| || | |||| || |||| Sbjct 735612 CATCCAGAAGGAGTCGACCCTCCACTTGGTTCTCCGGTTGAGAGGTGGTA 735563 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || |||||| |||| ||||| || |||||| | || ||||| || Sbjct 8339433 ATGCAAATTTTTGTGAAGACTTTGACTGGCAAGACTATCACCTTGGAAGTTGAGAGCTCA 8339492 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||| |||||||| | || || ||||| Sbjct 8339493 GACACAATTGATAACGTCAAGGCTAAGATTCAGGAAAAGGAAGGGATCCCACCAGACCAA 8339552 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371 || | || || |||||||| |||||| | || || | || | ||| ||||| || Sbjct 8339553 CAAAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGCAC-ACTAGCGGATTACAA 8339611 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||||| || || || || ||||| || || Sbjct 8339612 CATTCAGAAGGAGTCAACCCTTCACCTTGT 8339641 >seq1 Length=19566579 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || || || || || | || || || || || ||| | || || || | Sbjct 8289742 AAAAATGCAGATCTTTGTGAAAACCTTAACGGGGAAGACAATAACCCTAGAGGTAGAGTC 8289801 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || |||| |||| | || ||| || || ||||||||||| | || || || Sbjct 8289802 ATCAGACACGATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGGATCCCACCGGA 8289861 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || ||||| || |||||| |||||||| | || | ||| || Sbjct 8289862 CCAGCAGCGTCTGATCTTCGCCGGGAAACAGCTGGAAGACGGGAGAACACTCGCCGACTA 8289921 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| || ||||| ||||| |||||| |||| || | ||||| || ||| Sbjct 8289922 CAACATCCAGAAAGAGTCGACGCTTCATTTGGTGCTCCGTCTGAGAGGAGGT 8289973 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || ||||| || ||| | || || || || Sbjct 19036986 ATGCAGATATTCGTCAAGACCCTTACCGGTAAAACCATTACCCTAGAAGTCGAGAGTTCA 19037045 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| | || ||||||||||| | | || ||||| Sbjct 19037046 GACACCATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGGATCCAACCAGACCAA 19037105 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA--CTCTATGACTATGAGCGATTATA 31370 ||| | || ||||| || ||||| ||| | ||||| || | || | | ||||| | Sbjct 19037106 CAGAGACTCATATTTGCAGGCAAGCAGCTCGAAGATGGTCGAACGCTTTCA--GATTACA 19037163 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||| || |||||||| || ||||| || |||||| ||||||| || || Sbjct 19037164 ACATCCAGAAAGAATCAACCCTTCACCTTGTACTTCGACTGAGAGGTGG 19037212 >seq7 Length=17303919 Score = 95.1 bits (104), Expect = 1e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 23789 GACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCG 23848 ||||||| || |||||| | ||| |||| |||||| || || ||| || || | | Sbjct 446191 GACATTAAATGGTACGTATTGATTGCGGAATCAATATCATCCTTGTGGATGCCAACAGAA 446132 Query 23849 ACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATAT 23908 || | ||||| ||||| |||||| || || ||| ||| | | ||| || |||||| Sbjct 446131 ACCCTCATCAGCATGTGTTGAGGCCTTTCAACCACTTTGCCTTGTACTTTTAAGAGATAT 446072 Query 23909 GAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATC 23958 || | || | ||||||||||||||| || ||||| | ||| || ||||| Sbjct 446071 GATCTTTCAAGCGTTTTAAATCCAAAGTAATCATATTCAAAATCGCGATC 446022 >seq2 Length=14066726 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || || ||||||| || || || ||| | || ||||| || Sbjct 7052921 ATGCAAATCTTTGTGAAAACATTGACAGGTAAGACTATTACCTTGGAGGTTGAGAGCTCA 7052862 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || |||||| || || | || || |||||| Sbjct 7052861 GACACAATTGATAACGTCAAGGCTAAGATTCAGGACAAAGAGGGGATCCCACCAGACCAG 7052802 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || ||||| |||||| | || || | |||| || ||||||||| Sbjct 7052801 CAGAGACTCATCTTTGCTGGGAAACAGCTTGAGGATGGTCGGACTTTGGCTGATTATAAC 7052742 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTAGAAGC 31426 || ||||| ||||| ||||| || |||| ||| | || | || ||| ||||| Sbjct 7052741 ATCCAAAAGGAATCAACTCTCCACTTGGTTCTTCGTCTTCGTGGTGGTGGAAGC 7052688 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| || ||||| || || || || | || ||||| || Sbjct 7053149 ATGCAGATTTTTGTGAAGACCCTCACAGGAAAGACCATAACTTTGGAGGTTGAGAGTTCA 7053090 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | || ||| ||||| || | || || |||||| Sbjct 7053089 GACACAATCGATAATGTCAAAGCTAAGATTCAGGATAAGGAGGGGATCCCACCAGACCAG 7053030 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC--TCTATGACTATGAGCGATTATA 31370 ||| | || || || ||||| |||||| | || || || ||| || | ||||| | Sbjct 7053029 CAGAGACTCATCTTTGCTGGAAAACAGCTTGAGGATGGTCGCACACT-TGCG-GATTACA 7052972 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||| ||||||||||| |||||||| || || Sbjct 7052971 ACATCCAAAAAGAATCTACTCTTCACCTTGT 7052941 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| || || || || || || || | || ||||| || Sbjct 7053377 ATGCAGATTTTTGTGAAGACCCTTACCGGAAAGACCATAACTTTGGAGGTTGAGAGCTCA 7053318 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || |||||||||||| | || || ||||| Sbjct 7053317 GACACAATTGATAACGTCAAGGCTAAGATTCAGGACAAGGAAGGAATCCCACCAGACCAA 7053258 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || ||||| |||||| | ||||| | || | ||||| ||| Sbjct 7053257 CAGAGACTCATCTTTGCTGGGAAACAGCTTGAAGATGGTCGCACCCTTGCTGATTACAAC 7053198 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || || ||||| ||||| |||||| | || || || |||| Sbjct 7053197 ATCCAAAAGGAGTCTACTCTCCATCTTGTACTTCGTCTCAGAGGTGGTA 7053149 >seq4 Length=14994381 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || || || ||||||||| |||| || || | Sbjct 14616594 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTCGAGGTAGAGTC 14616653 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || |||| |||| | || || | || |||||||||||| | ||||| || Sbjct 14616654 ATCTGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGAATCCCGCCGGA 14616713 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAG-CGATT 31367 ||||||||| | || ||||| || || ||| | || ||| | || | || ||| | Sbjct 14616714 CCAGCAGCGATTGATTTTCGCCGGAAAGCAGCTCGAGGAC-GGACGAACCTTAGCCGACT 14616772 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | ||||| || || || || || ||||| || || || Sbjct 14616773 ACAACATCCAGAAGGAGTCAACGCTTCACCTTGTCCT 14616809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445762092782160