Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20rubella_20[refseq_20GCF_5F000375325.1_202013-04-23] 773 sequences; 133,063,876 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq6 134 1e-26 seq2 127 2e-24 seq7 125 6e-24 seq1 120 3e-22 seq5 118 9e-22 >seq6 Length=16577294 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | ||||| || ||||||| |||| || ||| ||| Sbjct 735563 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTTGAGAGCTCT 735504 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| ||| ||| ||||| ||||| || || || |||||| Sbjct 735503 GACACTATCGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAA 735444 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || |||| |||||||| || || |||| |||| || || | | || ||||| Sbjct 735443 CAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGCCGTACACTAGCTGACTACAAC 735384 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| ||||| || ||||| ||||| | || ||||| || Sbjct 735383 ATCCAGAAAGAGTCCACCCTTCATTTGGTGCTTCGTCTGAGAGGTGG 735337 Score = 129 bits (142), Expect = 5e-25 Identities = 158/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || ||| ||||||| | || || ||| || Sbjct 8339205 ATGCAGATCTTTGTGAAGACTTTGACTGGCAAAACCATCACCCTTGAGGTTGAGAGTTCA 8339264 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || || || ||| || ||| || ||||| || || ||||| || | Sbjct 8339265 GACACTATTGA--CAATGTTAAGGCTAAGATCCAGGATAAAGAGGGAATCCCACCGGATC 8339322 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| | |||| |||||||| ||||||||||| |||| |||||| | | ||||||| Sbjct 8339323 AGCAGAGACTTATCTTTGCCGGTAAACAATTAGAGGATGGTCGCACACTTGCGGATTACA 8339382 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||| || || ||||| || || || || || || Sbjct 8339383 ATATCCAGAAGGAATCAACCCTTCACTTGGTTCT 8339416 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||||||| || | ||||| | || |||||| ||| Sbjct 14990841 ATGCAGATCTTTGTCAAGACCTTGACCGGGAAGACTATCACCTTGGAGGTGGAGAGTTCT 14990900 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| || || ||||| ||||| || ||||| Sbjct 14990901 GACACCATTGACAACGTGAAGGCCAAGATCCAGGATAAGGAAGGTATTCCTCCAGACCAG 14990960 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || || ||||| | || |||| |||||| ||| || ||||| Sbjct 14990961 CAGCGTCTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCGCACCTTGGCTGACTACAAC 14991020 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || || || || || || || || ||||||||||| Sbjct 14991021 ATCCAGAAGGAGTCGACCCTTCACTTGGTGCTAAGGCT 14991058 Score = 111 bits (122), Expect = 1e-19 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| | ||||| || | ||||| | || || ||| || Sbjct 6990424 ATGCAGATTTTTGTAAAGACCCTAACCGGCAAGACTATCACTTTGGAGGTTGAGAGCTCA 6990365 Query 25059 GACACTATCGAGTCAC-TGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || | || ||||| | ||| ||||| |||||||| ||||| |||| Sbjct 6990364 GACACAATCGA-TAACGTCAAGGCAAAGATTCA-AGACAAGGAAGGGATCCCACCAGACC 6990307 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| | | || |||||||| ||||| | ||||| | || || | | ||||||| Sbjct 6990306 AGCAGAGACTCATCTTTGCCGGGAAACAGCTTGAAGACGGACGTACCCTCGCTGATTACA 6990247 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || |||||||| || || || ||| | ||||| Sbjct 6990246 ACATCCAAAAAGAGTCTACCCTGCATCTCGTGCT 6990213 Score = 98.7 bits (108), Expect = 9e-16 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||||||||| || || | ||||| | ||||| ||| || Sbjct 8339433 ATGCAAATTTTTGTGAAGACTTTGACTGGCAAGACTATCACCTTGGAAGTTGAGAGCTCA 8339492 Query 25059 GACACTATCGAGTCAC-TGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || | || | || || || | ||| || || |||||||| ||||| |||| Sbjct 8339493 GACACAATTGA-TAACGTCAAGGCTAAGATTCA-GGAAAAGGAAGGGATCCCACCAGACC 8339550 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || || || || ||||| | || |||| |||||| | | ||||||| Sbjct 8339551 AACAAAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGCACACTAGCGGATTACA 8339610 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 | ||||| || || || || || || Sbjct 8339611 ACATTCAGAAGGAGTCAACCCTTCA 8339635 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||||||||| || || | ||||| | || || ||| || Sbjct 8339661 ATGCAAATCTTTGTGAAGACTTTGACAGGCAAGACTATCACGTTGGAGGTTGAGAGCTCA 8339720 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| | || || | || ||||| |||||||| || || || Sbjct 8339721 GACACCATTGACAACGTCA---AGGCCAAGATACA-AGACAAGGAAGGGATCCCTCCGGA 8339776 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| | | || || || || ||||| | || |||| ||| || ||| ||||| Sbjct 8339777 CCAGCAGAGACTCATCTTCGCTGGAAAACAGCTTGAGGATGGTCGGACACTGGCAGATTA 8339836 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || || || || || || || || || || Sbjct 8339837 CAACATCCAGAAGGAGTCGACTCTTCACTTGGTTCT 8339872 >seq2 Length=14066726 Score = 127 bits (140), Expect = 2e-24 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || ||| |||| || | || || ||| ||| Sbjct 7053605 ATGCAGATCTTTGTGAAGACGTTGACAGGAAAAACCATTACTTTGGAGGTTGAGAGCTCT 7053546 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| || || || |||| || | ||| ||||| ||||||||||| || || Sbjct 7053545 GATACTATTGA--CAATGTTAAAGCTAAGATTCAG-GACAAGGAAGGGATTCCTCCGGAT 7053489 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || |||| ||||| || || || ||||| |||| |||||| | | |||||| Sbjct 7053488 CAGCAGAGGCTTATCTTTGCTGGTAAGCAGTTAGAGGATGGTCGCACACTTGCTGATTAC 7053429 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| || || || || ||| | ||||| | || ||||| || Sbjct 7053428 AACATCCAAAAGGAGTCTACTCTCCATCTTGTGCTTCGTCTCAGAGGTGG 7053379 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || | || || || |||| || | || || ||| ||| Sbjct 7053833 ATGCAAATTTTCGTGAAAACACTTACTGGCAAGACCATTACTCTTGAGGTAGAGAGCTCT 7053774 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || || | ||||| | ||| ||||| |||||||| || || || Sbjct 7053773 GACACTATCGA--CAATGTTAAGGCAAAGATTCAG-GACAAGGAAGGGATCCCTCCGGAT 7053717 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || | | || |||||||| ||||| | || |||| || || ||| |||||| Sbjct 7053716 CAGCAAAGATTGATCTTTGCCGGTAAACAGCTTGAGGATGGACGTACCTTGGCGGATTAC 7053657 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || || ||||| || || || || || || ||| ||||||| || Sbjct 7053656 AATATACAGAAGGAATCAACTCTCCACTTGGTTCTCAGGTTAAGAGGTGG 7053607 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/207 (71%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || |||| || | || || ||| || Sbjct 7053149 ATGCAGATTTTTGTGAAGACCCTCACAGGAAAGACCATAACTTTGGAGGTTGAGAGTTCA 7053090 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| |||| || | ||| || || || ||||| ||||| || Sbjct 7053089 GACACAATCGATAATGTCA---AAGCTAAGATTCAG-GATAAGGAGGGGATCCCACCAGA 7053034 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| | | || ||||| || ||||| | || |||| |||||| | | ||||| Sbjct 7053033 CCAGCAGAGACTCATCTTTGCTGGAAAACAGCTTGAGGATGGTCGCACACTTGCGGATTA 7052974 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 ||| || ||||||||||| || || || Sbjct 7052973 CAACATCCAAAAAGAATCTACTCTTCA 7052947 >seq7 Length=17303919 Score = 125 bits (138), Expect = 6e-24 Identities = 154/205 (75%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || ||| ||||||| | || || ||| ||| Sbjct 14231419 ATGCAGATTTTTGTCAAGACTTTGACGGGCAAAACCATCACTCTAGAGGTCGAGAGCTCT 14231360 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || || || | || ||||| | || | ||| |||||||||||||| |||| |||| Sbjct 14231359 GATACGATTGA-TAACGTGAAGGCCAAGATTCAA-GACAAAGAAGGGATCACACCGGACC 14231302 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| | | || |||||||| |||||| | ||||||| ||| || | | ||||||| Sbjct 14231301 AGCAGAGACTAATCTTTGCCGGTAAACAACTCGAAGATGGTCGAACACTTGCAGATTACA 14231242 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 |||| || ||||| || || || || Sbjct 14231241 ATATCCAGAAAGAGTCTACTCTTCA 14231217 Score = 120 bits (132), Expect = 3e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | ||||| || |||| || | || || || ||| Sbjct 14232787 ATGCAGATCTTTGTTAAGACTCTTACCGGGAAGACCATAACTCTTGAGGTTGAAAGCTCT 14232728 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || ||| || ||| || || ||||| ||| | || |||| Sbjct 14232727 GACACGATTGA--CAATGTCAAGGCTAAGATCCAAGATAAGGAAGGTATTACTCCGGACC 14232670 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || |||| ||||| ||||| ||| | ||||||| ||| || ||| || |||| Sbjct 14232669 AGCAGAGGCTTATCTTTGCAGGCAAGCAACTTGAAGATGGTCGTACATTGGCTGACTACA 14232610 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||||| || || || ||||| || || || ||| | ||||| || Sbjct 14232609 ATATTCAAAAGGAGTCAACTCTACACTTGGTTCTTAGGTTGAGAGGTGG 14232561 Score = 118 bits (130), Expect = 9e-22 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| || ||| | ||||| ||| |||| || | ||||| ||| ||| Sbjct 14231875 ATGCAAATATTTGTGAAAACTCTCACCGGCAAAACCATTACTCTAGAAGTTGAGAGCTCT 14231816 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || |||| || ||| ||||| |||||||| || || ||| Sbjct 14231815 GACACCATTGA--CAATGTCAAAGC-CAAGATCCAAGACAAGGAAGGGATCCCTCCGGAC 14231759 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| || |||| ||||| ||||| ||| | || |||| ||| || | | |||||| Sbjct 14231758 CAACAACGACTTATCTTTGCGGGCAAGCAACTCGAGGATGGTCGGACACTTGCGGATTAC 14231699 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || ||||| || || Sbjct 14231698 AACATCCAGAAGGAGTCAACTCTGCATTTGGTTCT 14231664 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| || ||| | ||||| ||| |||| | | ||||| ||| ||| Sbjct 14232559 ATGCAAATATTTGTGAAAACTCTCACCGGCAAAACCATTATTCTAGAAGTTGAGAGCTCT 14232500 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || ||| || ||| ||||| | ||| || | ||| |||| Sbjct 14232499 GACACCATTGA--CAATGTCAAGGCCAAGATCCAAGACAAGGTAGGAATCCTACCGGACC 14232442 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | || | |||| ||| ||||| ||| | || |||| ||| || | | ||||||| Sbjct 14232441 AGCAAAGACTTATCCATGCGGGCAAGCAACTCGAGGATGGTCGAACCCTTGCTGATTACA 14232382 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||| || || || || || || || || || ||| | ||||| || Sbjct 14232381 ATATTCAGAAGGAGTCAACACTTCACTTGGTTCTTAGGTTGAGAGGTGG 14232333 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| | || || || |||| | | ||||| || || Sbjct 14232331 ATGCAAATCTTTGTTAAGACTCTAACTGGCAAGACCATAATTCTTGAAGTTGAAAGCTCC 14232272 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||| ||||| || | || ||||| Sbjct 14232271 GACACCATTGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCTACTGGACCAG 14232212 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | |||| | ||| || || ||| | || |||| || ||| ||| ||||||||| Sbjct 14232211 CAGAGACTTATCTATGCGGGGAAGCAACTTGAGGATGGCCGTACTTTGGCGGATTACAAT 14232152 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || || || || ||||| || || || ||| | |||||||| Sbjct 14232151 ATTCAGAAGGAGTCAACTCTACACTTGGTTCTTAGGTTGAGAGGAGG 14232105 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| || ||||| | ||||| ||| |||| ||| | || || || || Sbjct 14231647 ATGCAAATATTCGTCAAGACCCTTACCGGAAAAACCATAACACTGGAGGTTGAAAGCTCA 14231588 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || ||| || ||| ||||| |||||||| | ||| |||| Sbjct 14231587 GACACAAT--AGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCTACCAGACC 14231530 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| | |||| || || ||||| ||| | || |||| || || | | ||||||| Sbjct 14231529 AGCAGAGACTTATCTTCGCTGGCAAGCAACTCGAGGATGGCCGAACCCTAGCGGATTACA 14231470 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || || || || || || || || ||||||| Sbjct 14231469 ACATCCAGAAGGAGTCAACACTTCACCTAGTGCT 14231436 >seq1 Length=19566579 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| | || || || | || || | ||||| ||| ||| Sbjct 19037442 ATGCAGATTTTTGTAAAGACCCTTACTGGAAAGACTATAACTTTGGAAGTTGAGAGCTCT 19037501 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | || ||||| || ||| ||||| ||||||||| |||| ||||| Sbjct 19037502 GACACAATTGA-TAACGTGAAGGCCAAGATCCAAGACAAGGAAGGGATTGCACCAGACCA 19037560 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | |||||||| || ||||| | || |||| ||||||| | | |||||||| Sbjct 19037561 ACAAAGACTCATTTTTGCTGGAAAACAGCTTGAGGATGGTCGCACTCTTGCTGATTACAA 19037620 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| || || || ||| | ||||| || ||| | || || Sbjct 19037621 CATCCAGAAAGAGTCAACTCTTCATCTCGTGCTGAGACTACGTGGTGG 19037668 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| | ||||| || | || || | ||||| ||| || Sbjct 19037670 ATGCAGATTTTTGTAAAGACCCTTACCGGAAAGACAATAACTTTGGAAGTTGAGAGCTCG 19037729 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || ||| ||| ||| ||||| |||||||| |||| |||| Sbjct 19037730 GACACAATTGA--CAATGTAAAGGCAAAGATCCAAGACAAGGAAGGGATCGCACCAGACC 19037787 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | || || || || ||||| | || |||| ||||||| | | ||||||| Sbjct 19037788 AACAAAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGCACTCTTGCAGATTACA 19037847 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || ||||| || || || || || | ||||| Sbjct 19037848 ACATCCAAAAGGAGTCAACCCTTCACCTTGTGCT 19037881 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| ||| |||||| || | ||||||| | || ||||| | | Sbjct 19037898 ATGCAGATATTTGTTAAGGATTTGACGGGAAGCACCATCACGCTTGAGGTGGAAAGCTTT 19037957 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || ||||| || | | ||| |||||||||||||| | || ||||| Sbjct 19037958 GATACGATTGACAATGTGAAGGCACAGATTCAG-GACAAAGAAGGGATCCACCCGGACCA 19038016 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| || ||| ||||| || || || | ||||||| || |||| | | |||||||| Sbjct 19038017 ACAGAGGCTTAACTTTGCAGGGAAGCAGCTCGAAGATGGTCACACTTTAGCGGATTACAA 19038076 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || ||||| || || || || Sbjct 19038077 CATCCAGAAAGAGTCAACTCTTCA 19038100 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 |||||||| || || ||||| || |||||| || | || ||||| || |||||| | ||| Sbjct 10960261 GACAAAGAGGGAATACCACCGGATCAACAGAGGCTGATATTTGCTGGGAAACAACTCGAA 10960202 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 |||| ||| || | | ||||||||||| || ||||| || || || || || || | Sbjct 10960201 GATGGTCGAACACTTGCTGATTACAATATCCAGAAAGAGTCGACACTTCACTTGGTCTTG 10960142 Query 25212 AGGCTAAGAGGAGG 25225 ||||| || || || Sbjct 10960141 AGGCTCAGGGGTGG 10960128 >seq5 Length=13709650 Score = 118 bits (130), Expect = 9e-22 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | || || || |||| || | || ||||||||||| Sbjct 13270372 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTGGAGTCGTCA 13270431 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || |||| || ||| ||||| |||||||| ||||| ||| Sbjct 13270432 GACACGATCGA--CAATGTGAAAGC-GAAGATCCAAGACAAGGAAGGGATCCCACCGGAC 13270488 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || |||||| | || || ||||| || || | ||||| | |||||| ||| ||| ||| Sbjct 13270489 CAGCAGCGGTTGATATTCGCCGGGAAGCAGCTGGAAGACGGCCGCACTCTGGCCGACTAC 13270548 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| ||||| ||| | ||||| Sbjct 13270549 AACATCCAGAAGGAATCGACGCTTCATCTGGTGCT 13270583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433323917643995