Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20rubella_20[refseq_20GCF_5F000375325.1_202013-04-23] 773 sequences; 133,063,876 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq6 131 1e-25 seq1 113 4e-20 seq7 111 1e-19 seq2 107 2e-18 seq4 84.2 2e-11 >seq6 Length=16577294 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || || | ||| | ||| | || || || || || |||||||| || Sbjct 2562835 ATACCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCA 2562894 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| ||||| ||||| |||||| ||||||| | ||| ||||||||| Sbjct 2562895 GCCAATGTGCGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGA 2562954 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||| || | | |||| |||||| | | || Sbjct 2562955 GGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTATCAATGGTGTCTGAGCTCTCA 2563014 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || |||||||| ||||| || |||||||||||||| Sbjct 2563015 ACCTCCAAGGTTATTGTCTTGCCGGTGAGAGTCTTGACAAAAATCTGCAT 2563064 Score = 131 bits (144), Expect = 1e-25 Identities = 173/239 (72%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 114144 CATTTACAAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATG 114203 ||||| || | ||| ||||| || | | || | ||| | ||||| || ||||| ||| Sbjct 14991306 CATTT-CAGAAACCACCACGGAGACGGAGGACGAGATGAAGGGTAGACTCCTTTTGGATG 14991248 Query 114204 TTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGT 114263 ||||| || || ||| ||| ||| ||||| ||||| |||||| ||||||||||||| Sbjct 14991247 TTGTAGTCAGCCAAAGTGCGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGC 14991188 Query 114264 TGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCG 114323 ||||||||||| || ||||| ||||| ||||| || | | |||| ||||||| Sbjct 14991187 TGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCG 14991128 Query 114324 GTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | | || || |||| || | || || ||||||| || || ||||| |||||||| Sbjct 14991127 GAGCTCTCCACTTCCAGTGTGATGGTCTTCCCGGTCAAGGTCTTGACAAAGATCTGCAT 14991069 Score = 122 bits (134), Expect = 7e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 ||| ||| ||||| || | | || || || | || ||||| || ||||||||||| | Sbjct 2562605 AAAAACCACCACGGAGACGGAGGACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGT 2562664 Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270 | || || ||| || ||||| || || |||||| ||||||||||||| ||||||| Sbjct 2562665 CTGCCAGTGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCG 2562724 Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330 |||| |||||||| || || ||||| || | | |||| |||||||| | | Sbjct 2562725 GAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCT 2562784 Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || | ||| | || || ||||||| || || |||||||||||||| Sbjct 2562785 CAACCTCAAGGGTGATGGTCTTCCCGGTCAACGTCTTCACAAAAATCTGCAT 2562836 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 |||||||| || | | ||| || || | ||||| || || || ||||||||||| Sbjct 6989970 CCGCCACGAAGACGAAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCTGCA 6990029 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| ||| ||| ||||| ||||| |||||| ||||||| | ||| ||||| || || Sbjct 6990030 AGAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGG 6990089 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| |||||| ||| | | |||| ||||| | | || || Sbjct 6990090 ATCCCTTCCTTGTCCTGAATCTTGGCTTTAACGTTATCAATAGTGTCTGAGCTCTCAACC 6990149 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | || |||||||| || || || |||||||| ||||| Sbjct 6990150 TCCAAAGTGATGGTCTTGCCGGTAAGGGTCTTCACAAAAATTTGCAT 6990196 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC- 114211 ||||| ||||| || | ||| || | || | || || || || |||||||||||||| Sbjct 8339662 ATACCACCACGAAGACGCAACACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCC 8339603 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 ||| | || ||| ||| ||||| |||||||||||| ||||||| | |||||||| || Sbjct 8339602 GCTAGT-GTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTTTGTTGGTCTGG 8339544 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 || || ||||| || || |||||| || | | |||| ||||| | | || Sbjct 8339543 TGGGATCCCTTCCTTTTCCTGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTC 8339484 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || ||||| |||| ||| || |||||||| ||||| Sbjct 8339483 AACTTCCAAGGTGATAGTCTTGCCAGTCAAAGTCTTCACAAAAATTTGCAT 8339433 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | ||||| |||||||| ||||||||||| Sbjct 6990195 ATACCACCACGGAGACGAAGCACGAGATGCAGGGTAGACTCTTTTTGGATGTTGTAATCA 6990254 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| |||||||| ||||| || || ||||||| | ||| ||||| || Sbjct 6990255 GCGAGGGTACGTCCGTCTTCAAGCTGTTTCCCGGCAAAGATGAGTCTCTGCTGGTCTGGT 6990314 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||||| || | | || | ||||| | | || Sbjct 6990315 GGGATCCCTTCCTTGTCTTGAATCTTTGCCTTGACGTTATCGATTGTGTCTGAGCTCTCA 6990374 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || |||||||| || || ||||||||||||||||| Sbjct 6990375 ACCTCCAAAGTGATAGTCTTGCCGGTTAGGGTCTTTACAAAAATCTGCAT 6990424 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || || | || || || | || || || || || |||||||| || Sbjct 14991070 ATACCACCACGGAGCCTTAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCA 14991011 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| ||||| ||||| |||||| ||||||||||||| ||||| ||| Sbjct 14991010 GCCAAGGTGCGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGA 14990951 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| || || ||||| || | | |||| |||||| | || Sbjct 14990950 GGAATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAACTCTCC 14990891 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || || ||||||| || || ||||| |||||||| Sbjct 14990890 ACCTCCAAGGTGATAGTCTTCCCGGTCAAGGTCTTGACAAAGATCTGCAT 14990841 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || || | || || || || || ||||||||||| || ||||| |||||| Sbjct 735582 AACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCCAAGGTACGGCCATCTTC 735641 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 || |||||||||||| |||| | | ||| || ||||||||||||||||| ||||| Sbjct 735642 GAGCTGTTTACCAGCGAAGATTAATCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTG 735701 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 |||||| || | | || | |||||| | | ||||| || | || | || || Sbjct 735702 GATCTTTGCCTTCACATTGTCGATGGTGTCTGAGCTCTCGACCTCGAGAGTGATGGTCTT 735761 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| || || ||||| |||||||| ||||| Sbjct 735762 GCCAGTTAGTGTTTTCACAAAAATTTGCAT 735791 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| ||||| | || || ||||| || |||||||||||| || || || |||||| Sbjct 6990899 AACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTC 6990958 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 ||| |||||||| ||| |||| | | || |||||||||||||||||||| ||||| Sbjct 6990959 AAGCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTG 6991018 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 |||||| || | | || | |||||| | | ||||| || | || | || || Sbjct 6991019 GATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCGACCTCAAGAGTGATGGTCTT 6991078 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || ||||| || ||||| ||||| Sbjct 6991079 ACCAGTGAGTGTTTTCACGAAAATTTGCAT 6991108 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | ||| || || | || || || || || ||||||||||| | Sbjct 8339887 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCC 8339828 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || ||| ||| ||||| ||||| |||||| ||||||| | ||| ||||||||||| Sbjct 8339827 AGTGTCCGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGG 8339768 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| ||||| || | | |||| |||||| | | || || Sbjct 8339767 ATCCCTTCCTTGTCTTGTATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACC 8339708 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | || ||||| |||| ||| || ||||| || ||||| Sbjct 8339707 TCCAACGTGATAGTCTTGCCTGTCAAAGTCTTCACAAAGATTTGCAT 8339661 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT-C 114211 ||||| ||||| || | | || || || | ||||| || || || |||||||||| | Sbjct 735106 ATACCACCACGGAGACGAAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCC 735165 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 ||| | || || |||||| || || || |||||| ||||||| | ||| ||||| || Sbjct 735166 GCT-AGGGTGCGTCCATCTTCGAGCTGCTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGG 735224 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 || || ||||| ||||| |||||| ||| | | || | ||||| | | || Sbjct 735225 TGGGATCCCTTCCTTGTCCTGAATCTTGGCTTTGACGTTGTCGATTGTGTCAGAGCTCTC 735284 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || |||||||| || || || |||||||||||||| Sbjct 735285 CACCTCCAAAGTGATGGTCTTGCCGGTTAGGGTCTTGACAAAAATCTGCAT 735335 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| ||||| | || || ||||| || ||||||||||| || ||||| |||||| Sbjct 8339186 AACCAAATGAAGGGTTGACTCTTTCTGGATGTTGTAATCTGCCAAGGTACGGCCATCTTC 8339127 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 || |||||||||||| |||| | | || || ||||||||||||||||| ||||| Sbjct 8339126 TAGCTGTTTACCAGCGAAGATCAATCTTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTG 8339067 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| || | | |||| |||||| | | || || || | || | || || Sbjct 8339066 GATCTTCGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTT 8339007 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| || || ||||| || ||||| ||||| Sbjct 8339006 GCCAGTGAGTGTTTTCACGAAAATTTGCAT 8338977 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACGAGAATCTTC 114232 || ||||| | || || ||||| || |||||||| || ||| | ||||| ||| || Sbjct 735355 ACCAAATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCTAGT-GTACGGCCATCCTC 735413 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 || || ||||| || |||| || | ||||||||||||||| || ||||| ||||| Sbjct 735414 TAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGGATACCTTCCTTGTCCTG 735473 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 |||||| || | | || | ||||| | | || || || | ||| | || || Sbjct 735474 GATCTTTGCCTTGACGTTGTCGATAGTGTCAGAGCTCTCAACCTCGAGGGTGATGGTCTT 735533 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||||| ||||| || ||||| |||||||| Sbjct 735534 GCCGGTGAGAGTCTTGACAAAGATCTGCAT 735563 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || || | || || || | || ||||| || ||||||||||| || Sbjct 2563519 ATACCACCACGAAGCCTGAGGACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCA 2563578 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| |||||| || || || || || |||| || | || || |||||| Sbjct 2563579 GCCAAGGTACGGCCATCTTCGAGCTGCTTTCCGGCAAAGATAAGCCTTTGCTGATCCGGA 2563638 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||| || | | || | ||||| | | ||| Sbjct 2563639 GGGATACCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATTGTGTCAGAGCTTTCC 2563698 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || ||||| ||||| || ||||| |||||||| Sbjct 2563699 ACCTCGAGGGTGATAGTCTTCCCGGTGAGAGTCTTAACAAAGATCTGCAT 2563748 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || ||||| || ||||||||||| || || ||| ||| || Sbjct 6990444 ACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGCCAAGGTGCGACCATCCTCT 6990503 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || ||||| || |||| || | ||| || ||||| || || || ||||| || Sbjct 6990504 AGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGGATTCCCTCTTTATCTTGG 6990563 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| ||| | | |||| ||| || | | || || || | ||| | ||||| Sbjct 6990564 ATCTTAGCTTTGACATTGTCAATGGTATCTGAGCTCTCAACCTCTAGGGTGATTGTTTTA 6990623 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || ||||| || ||||| |||||||| Sbjct 6990624 CCAGTGAGAGTCTTCACAAAGATCTGCAT 6990652 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || || | ||| | ||| | || || || || || |||||||||||| Sbjct 14990386 ATACCTCCACGAAGCCTGAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCG 14990327 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | || || ||||| || || ||| |||| | | ||| ||||||||| Sbjct 14990326 GCAAGGGTTCTGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGA 14990267 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| ||| | | || | |||||| | || Sbjct 14990266 GGGATACCCTCCTTGTCTTGGATCTTGGCTTTAACGTTGTCGATGGTGTCAGAACTCTCC 14990207 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| || ||||| || ||||| || ||||||||||| Sbjct 14990206 ACCTCGAGAGTAATCGTCTTTCCGGTTAGGGTTTTGACGAAAATCTGCAT 14990157 >seq1 Length=19566579 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | || || | || | || || || ||||| ||||||||||| Sbjct 19037899 ATCCCACCACGAAGACGCAGCACAAGGTGAAGGGTTGACTCCTTTTGGATGTTGTAATCT 19037840 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| ||| ||||| |||||||||||| ||||||| | |||||||| || Sbjct 19037839 GCAAGAGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTTTGTTGGTCTGGT 19037780 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 | || ||||| ||||| |||||| |||| | |||| ||||| | | || Sbjct 19037779 GCGATCCCTTCCTTGTCTTGGATCTTTGCCTTTACATTGTCAATTGTGTCCGAGCTCTCA 19037720 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || ||||| || || ||||||||||||||||| Sbjct 19037719 ACTTCCAAAGTTATTGTCTTTCCGGTAAGGGTCTTTACAAAAATCTGCAT 19037670 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||||||||||| || | ||| | || || ||||| || ||||||||||| Sbjct 19037671 ATCCCACCACGTAGTCTCAGCACGAGATGAAGAGTTGACTCTTTCTGGATGTTGTAATCA 19037612 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| ||| ||||| ||||| ||||| | ||||| | |||||||| || Sbjct 19037611 GCAAGAGTGCGACCATCCTCAAGCTGTTTTCCAGCAAAAATGAGTCTTTGTTGGTCTGGT 19037552 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 | ||| ||||| ||||| ||||| || | | |||| ||||| | | || Sbjct 19037551 GCAATCCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTATCAATTGTGTCAGAGCTCTCA 19037492 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || || || || ||||||||||||||||| Sbjct 19037491 ACTTCCAAAGTTATAGTCTTTCCAGTAAGGGTCTTTACAAAAATCTGCAT 19037442 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| ||||||| || | ||| | || || ||||| || ||||||||||| Sbjct 19037443 ATCCCACCACGGAGTCTCAGCACAAGATGGAGGGTTGACTCTTTCTGGATGTTGTAATCT 19037384 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || |||||| || ||||| || || ||||||| | ||||||||| || Sbjct 19037383 GCAAGAGTGCGGCCATCTTCGAGCTGTTTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGT 19037324 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 | || ||||| ||||| |||||| || | | || | ||||| | | || Sbjct 19037323 GATATCCCTTCCTTGTCTTGGATCTTTGCCTTCACGTTATCGATCGTGTCAGAGCTCTCA 19037264 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||||||||| || || || || || |||||||| Sbjct 19037263 ACTTCCAAAGTTATGGTTTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 19037214 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| || ||||||||||| | || ||| |||||| || || || || Sbjct 19037182 GTTGATTCTTTCTGGATGTTGTAATCTGAAAGCGTTCGACCATCTTCGAGCTGCTTGCCT 19037123 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | ||||| | ||||||||| || | || ||||| ||||| |||||| ||| Sbjct 19037122 GCAAATATGAGTCTCTGTTGGTCTGGTTGGATCCCTTCCTTGTCTTGAATCTTAGCTTTA 19037063 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | ||||| || | ||| | ||||| ||||| || || Sbjct 19037062 ACATTGTCAATGGTGTCTGAACTCTCGACTTCTAGGGTAATGGTTTTACCGGTAAGGGTC 19037003 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 19037002 TTGACGAATATCTGCAT 19036986 >seq7 Length=17303919 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| ||||| | || || || || || ||||||||||| Sbjct 14231646 ATGCCACCACGAAGACGAAGAACCAAATGCAGAGTTGACTCCTTCTGGATGTTGTAATCC 14231705 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||| || ||||| || || || |||| || || |||||||||||| Sbjct 14231706 GCAAGTGTCCGACCATCCTCGAGTTGCTTGCCCGCAAAGATAAGTCGTTGTTGGTCCGGA 14231765 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||| ||| | | |||| |||||| | | || Sbjct 14231766 GGGATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCAATGGTGTCAGAGCTCTCA 14231825 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | || | ||||||||||| |||||||| ||||| || |||||| Sbjct 14231826 ACTTCTAGAGTAATGGTTTTGCCGGTGAGAGTTTTCACAAATATTTGCATG 14231876 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| ||||| || || |||||||| | || ||| |||||| ||||||||||| Sbjct 14231223 GTAGACTCTTTCTGGATATTGTAATCTGCAAGTGTTCGACCATCTTCGAGTTGTTTACCG 14231282 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| |||||||| | || ||||||||||| |||||| || Sbjct 14231283 GCAAAGATTAGTCTCTGCTGGTCCGGTGTGATCCCTTCTTTGTCTTGAATCTTGGCCTTC 14231342 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | | ||||| || | || | |||||||| |||| ||| Sbjct 14231343 ACGTTATCAATCGTATCAGAGCTCTCGACCTCTAGAGTGATGGTTTTGCCCGTCAAAGTC 14231402 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||||||||| Sbjct 14231403 TTGACAAAAATCTGCAT 14231419 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || |||| || || || |||||||| ||||| || || |||||| |||||| Sbjct 14232578 AACCAAGTGTAGAGTTGACTCCTTTTGAATATTGTAGTCAGCCAATGTACGACCATCTTC 14232637 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 |||||| || || || |||| || | ||| |||||||||| ||| ||||| || || Sbjct 14232638 AAGTTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCCGGAGTAATACCTTCCTTATCTTG 14232697 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| || | | |||| ||||| | | ||| || || | || | || || Sbjct 14232698 GATCTTAGCCTTGACATTGTCAATCGTGTCAGAGCTTTCAACCTCAAGAGTTATGGTCTT 14232757 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| ||||| || ||||| |||||||| Sbjct 14232758 CCCGGTAAGAGTCTTAACAAAGATCTGCAT 14232787 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || | ||| | || || || || || ||||||||||| Sbjct 14231874 ATGCCACCACGAAGACGAAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCA 14231933 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||||| || || ||||||||||| || | || || | ||| ||||||||| Sbjct 14231934 GCCAAAGTACGACCGTCCTCGAGTTGTTTACCTGCAAAAATAAGTCTCTGCTGGTCCGGA 14231993 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 | |||||||| || || ||||| || | | |||| ||||| | |||| Sbjct 14231994 GTGATGCCTTCCTTATCTTGGATCTTCGCCTTCACATTGTCAATCGTGTCAGAACTTTCG 14232053 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || || | || | || ||||| || || || || ||||| || |||||| || Sbjct 14232054 ACCTCAAGAGTTATGGTCTTGCCCGTAAGGGTCTTAACAAAGATTTGCATGCCT 14232107 >seq2 Length=14066726 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || ||||| ||||||||||| | || ||| ||||||||| ||||| ||| Sbjct 7053181 GTAGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGACCATCTTCAAGCTGTTTCCCA 7053240 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| | ||||||||| || || || ||||| ||||| |||||| || Sbjct 7053241 GCAAAGATGAGTCTCTGTTGGTCTGGTGGGATTCCTTCCTTGTCCTGAATCTTAGCCTTG 7053300 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||| | | || || |||| || | || || ||||| || || Sbjct 7053301 ACGTTATCAATTGTGTCTGAGCTCTCAACCTCCAAAGTTATGGTCTTTCCGGTAAGGGTC 7053360 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||||||||| Sbjct 7053361 TTCACAAAAATCTGCAT 7053377 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | ||| || | || | |||||||||||||| ||||||||||| Sbjct 7052920 ATACCACCACGAAGACGCAACACAAGGTGAAGAGTAGATTCTTTTTGGATGTTGTAATCC 7052979 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||| ||||| ||||| ||||| ||||||| | ||| ||||| || Sbjct 7052980 GCAAGTGTGCGACCATCCTCAAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGGTCTGGT 7053039 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || || || |||||| ||| | | || | ||||| | || Sbjct 7053040 GGGATCCCCTCCTTATCCTGAATCTTAGCTTTGACATTATCGATTGTGTCTGAACTCTCA 7053099 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || || || || || |||||||||||||| Sbjct 7053100 ACCTCCAAAGTTATGGTCTTTCCTGTGAGGGTCTTCACAAAAATCTGCAT 7053149 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || ||||| ||||||||||| | || ||| ||| || | || |||||| Sbjct 7053409 GTAGACTCCTTTTGGATGTTGTAATCAGCAAGTGTGCGACCATCCTCTAACTGCTTACCA 7053468 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || ||||||||||| ||||| ||||| |||||| ||| Sbjct 7053469 GCAAAGATAAGCCTCTGCTGATCCGGAGGAATCCCTTCCTTGTCCTGAATCTTAGCTTTA 7053528 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | | || || |||| || | ||||| || |||| || Sbjct 7053529 ACATTGTCAATAGTATCAGAGCTCTCAACCTCCAAAGTAATGGTTTTTCCTGTCAACGTC 7053588 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 7053589 TTCACAAAGATCTGCAT 7053605 >seq4 Length=14994381 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| || | || ||||| || | ||| | ||||| ||||| || ||||||||||| Sbjct 9871047 TACCACCTCTGAGCCTCAAGACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAG 9870988 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 || || || |||||| ||||| |||||||| ||||||| | ||||| || || | Sbjct 9870987 CCAAGGTTCGGCCATCTTCGAGTTGCTTACCAGCAAAGATGAGCCTTTGTTGATCAGGTG 9870928 Query 114274 GAATGCCTTCTTTGTC 114289 | || || |||||||| Sbjct 9870927 GTATACCCTCTTTGTC 9870912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420130441940076