Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20rubella_20[refseq_20GCF_5F000375325.1_202013-04-23] 773 sequences; 133,063,876 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq6 111 2e-19 seq7 109 5e-19 seq4 100 3e-16 seq1 98.7 1e-15 seq5 93.3 4e-14 >seq6 Length=16577294 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 || |||| || ||| | || ||||| | | | ||||| || || ||||||||||| ||| Sbjct 735337 CCACCTCTCAGACGAAGCACCAAATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCT 735396 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| ||||| || || ||||||| | |||| || | ||||||||||||||| Sbjct 735397 -AGTGTACGGCCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGG 735455 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||| ||| || | | || | ||||| | ||| || Sbjct 735456 GATACCTTCCTTGTCCTGGATCTTTGCCTTGACGTTGTCGATAGTGTCAGAGCTCTCAAC 735515 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | || || || || ||||| || ||||| |||||||| Sbjct 735516 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 735563 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || | ||| | | | ||||||||||| ||||||||||| | Sbjct 14991295 CCACCACGGAGACGGAGGACGAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCC 14991236 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| || ||||| || | |||| |||||||| ||||||||||| Sbjct 14991235 AAAGTGCGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 14991176 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||| || || | |||| || | |||||||| |||||| Sbjct 14991175 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTG-TCAATGGTGTCGGAGCTCTCCAC 14991117 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || |||| || || ||||| |||||||| Sbjct 14991116 TTCCAGTGTGATGGTCTTCCCGGTCAAGGTCTTGACAAAGATCTGCAT 14991069 Score = 102 bits (112), Expect = 8e-17 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| | ||| | | | |||||||| || |||||||| ||| | || | |||||| Sbjct 14990366 AACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTC 14990307 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 |||||| || |||| |||| | | ||| ||||||||||| ||||| || ||||| Sbjct 14990306 GAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTG 14990247 Query 138525 GATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 ||| || | ||||| |||| | | |||||| | ||||||||||| || | ||| Sbjct 14990246 GATCTTG-GCTTTAACGTTGT-CGATGGTGTCAGAACTCTCCACCTCGAGAGTAATCGTC 14990189 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || || || ||||| || ||||||||||| Sbjct 14990188 TTTCCGGTTAGGGTTTTGACGAAAATCTGCAT 14990157 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||||| | ||| ||||| | | | ||||| || || |||||||| ||| | Sbjct 6990882 CCACCTCTTAAACGGAGAACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGCC 6990941 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || |||||||||| |||| | | || ||||||||||| Sbjct 6990942 AAGGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGAGGA 6991001 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| ||| || | |||| || | |||||| | ||| || Sbjct 6991002 ATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTG-TCGATGGTGTCAGAGCTCTCGAC 6991060 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || |||||||| || ||||| || ||||| ||||| Sbjct 6991061 CTCAAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 6991108 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||| | || ||||| | | | ||||| || || |||||||| || | Sbjct 6990426 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGCC 6990485 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || ||||||| | |||| || | ||| || ||||| || Sbjct 6990486 AAGGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGG 6990545 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || ||||| || ||| || ||| | ||||| | | ||| || | ||| || Sbjct 6990546 ATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGT-CAATGGTATCTGAGCTCTCAAC 6990604 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | ||||||||||| ||||| || ||||| |||||||| Sbjct 6990605 CTCTAGGGTGATTGTTTTACCAGTGAGAGTCTTCACAAAGATCTGCAT 6990652 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | || ||||| |||||||||||||| | Sbjct 2562610 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGCC 2562669 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||| || || || || | |||| |||||||| ||||||||||| Sbjct 2562670 AGTGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 2562729 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| || || | | || | |||||||| ||| ||| Sbjct 2562730 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACC 2562789 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || |||| || || |||||||||||||| Sbjct 2562790 TCAAGGGTGATGGTCTTCCCGGTCAACGTCTTCACAAAAATCTGCAT 2562836 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | |||||||||| || |||||||||||| | Sbjct 14990839 CCACCACGTAGACGCAAGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCC 14990780 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| | || || |||| | |||| | | ||| |||||||| || Sbjct 14990779 AAGGTACGACCATCCTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 14990720 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| |||||||| ||| || || | | || | |||||| | || || Sbjct 14990719 ATACCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGCTTTCAACT 14990660 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || |||||||| || || |||||||| Sbjct 14990659 TCCAAGGTGATTGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCAT 14990613 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| |||||||||||||| || ||||| || ||||| || || |||| | Sbjct 2563555 GATTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGGCCATCTTCGAGCTGCTTTCCGGCA 2563614 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || | || || |||||||| |||||||| ||||| || | || | |||| Sbjct 2563615 AAGATAAGCCTTTGCTGATCCGGAGGGATACCTTCCTTGTC-CTGGATCTTGGCCTTAAC 2563673 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | |||||||||| || | || || || || ||||| | Sbjct 2563674 GTTG-TCGATTGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTCCCGGTGAGAGTCT 2563732 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 2563733 TAACAAAGATCTGCAT 2563748 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | |||| ||||| || || ||||| || | | Sbjct 8339431 CCACCACGGAGACGAAGAACCAAGTGAAGGGTTGATTCCTTCTGGATATTGTAATC-CGC 8339373 Query 138448 ATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | ||| |||| ||||| | ||||||||||| | |||| || | ||| || ||||| | Sbjct 8339372 A-AGTGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATAAGTCTCTGCTGATCCGGTG 8339314 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCC 138564 | || || ||||| || ||| || || | |||| || | ||||| | ||| Sbjct 8339313 GGATTCCCTCTTTATCCTGGATCTTAGCCTTAACATTG-TCAATAGTGTCTGAACTCTCA 8339255 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | ||||| ||||||| ||| || ||||| |||||||| Sbjct 8339254 ACCTCAAGGGTGATGGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 8339205 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| | ||| | | | |||||||| || ||||||||||| || || || ||||| Sbjct 2562855 AACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTC 2562914 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 || ||||| || | |||| || | ||| ||||||||||| || ||||| ||||| Sbjct 2562915 AAGCTGTTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTG 2562974 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 ||| || || | | || | |||||| | ||| ||||| | || | || || Sbjct 2562975 GATCTTGGCCTTCACGTTATCAATGGTGTCTGAGCTCTCAACCTCCAAGGTTATTGTCTT 2563034 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || ||||| || |||||||||||||| Sbjct 2563035 GCCGGTGAGAGTCTTGACAAAAATCTGCAT 2563064 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||||| || || || | | | ||||||||||| ||||||||||| | Sbjct 14990611 CCTCCACGCAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCC 14990552 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | |||||| | || || || | | |||| | | ||| |||||||| || Sbjct 14990551 AAGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGG 14990492 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| |||||||| ||| || || | | || | |||||| | ||||||| Sbjct 14990491 ATACCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAACTCTCCACC 14990432 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || |||| || || ||||| || ||||| Sbjct 14990431 TCCAAGGTGATAGTCTTCCCGGTCAACGTCTTGACAAAGATTTGCAT 14990385 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || || ||||| || ||||| || | Sbjct 14991034 GACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATCCTCAAGCTGTTTTCCAGCG 14990975 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| ||||| |||||||| || || ||| || || | Sbjct 14990974 AAGATGAGACGCTGCTGGTCTGGAGGAATACCTTCCTTATCCTGGATCTTGGCCTTCACG 14990915 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||| | || | || || || |||| || || Sbjct 14990914 TTGTCAATGGTGTCAGAACTCTCCACCTCCAAGGTGATAGTCTTCCCGGTCAAGGTCTTG 14990855 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 14990854 ACAAAGATCTGCAT 14990841 >seq7 Length=17303919 Score = 109 bits (120), Expect = 5e-19 Identities = 167/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | ||| ||||| | |||||||||| || |||||||| || | Sbjct 14231648 GCCACCACGAAGACGAAGAACCAAATGCAGAGTTGACTCCTTCTGGATGTTGTAATC-CG 14231706 Query 138447 CATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504 || ||| ||| ||||||||||| || || | | |||| || || |||||||||||| Sbjct 14231707 CA-AGTGTCCGACCATCCTCGAGTTGCTTGCCCGCAAAGATAAGTCGTTGTTGGTCCGGA 14231765 Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTC 138563 || || ||||| ||||| ||| || ||| | |||| || | |||||| | ||| Sbjct 14231766 GGGATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATTG-TCAATGGTGTCAGAGCTCTC 14231824 Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || || | || | ||||| || || |||||||| ||||| || |||||| Sbjct 14231825 AACTTCTAGAGTAATGGTTTTGCCGGTGAGAGTTTTCACAAATATTTGCATG 14231876 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| ||| | | ||| || |||| |||||||||||||||| |||||||| Sbjct 14232560 GCCACCTCTCAACCTAAGAACCAAGTGTAGAGTTGACTCCTTTTGAATATTGTAGTCAGC 14232619 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||||| || || ||||| || || | | |||| || | ||| |||||||||| Sbjct 14232620 CAATGTACGACCATCTTCAAGTTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCCGGAGT 14232679 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| || || ||| || || | |||| || | ||||| | || | Sbjct 14232680 AATACCTTCCTTATCTTGGATCTTAGCCTTGACATTG-TCAATCGTGTCAGAGCTTTCAA 14232738 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || || || ||||| || ||||| |||||||| Sbjct 14232739 CCTCAAGAGTTATGGTCTTCCCGGTAAGAGTCTTAACAAAGATCTGCAT 14232787 Score = 89.7 bits (98), Expect = 5e-13 Identities = 161/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | || | ||| | | |||||||||| || |||||||| || Sbjct 14231876 GCCACCACGAAGACGAAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGC 14231935 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || |||||| |||||||||||||||||| | | | || || | ||| |||||||||| Sbjct 14231936 CAAAGTACGACCGTCCTCGAGTTGTTTACCTGCAAAAATAAGTCTCTGCTGGTCCGGAGT 14231995 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| || || ||| || || | |||| || | ||||| | || | Sbjct 14231996 GATGCCTTCCTTATCTTGGATCTTCGCCTTCACATTG-TCAATCGTGTCAGAACTTTCGA 14232054 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 |||| | || | || || || || || || || ||||| || |||||| || Sbjct 14232055 CCTCAAGAGTTATGGTCTTGCCCGTAAGGGTCTTAACAAAGATTTGCATGCCT 14232107 >seq4 Length=14994381 Score = 100 bits (110), Expect = 3e-16 Identities = 142/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || |||||||||||| | || || ||||||||| || || |||| Sbjct 14616793 TTGACTCCTTCTGGATGTTGTAGTCGGCTAAGGTTCGTCCGTCCTCGAGCTGCTTTCCGG 14616734 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | || | ||||| |||||||| || || ||||| ||||| ||| || || | Sbjct 14616733 CGAAAATCAATCGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCA 14616674 Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| || | |||||| | ||||| ||||||| || | ||| || || || || ||| Sbjct 14616673 CATTG-TCGATGGTGTCAGATGACTCTACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTT 14616615 Query 138598 TTTACAAAAATCTGCAT 138614 || || || |||||||| Sbjct 14616614 TTCACGAAGATCTGCAT 14616598 >seq1 Length=19566579 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||| | || ||||| | | ||||| || || |||||||||||| Sbjct 8289972 CCTCCTCTCAGACGGAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGCG 8289913 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | | ||| || || ||||| |||| |||| |||||||| |||||||| || Sbjct 8289912 AGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGGG 8289853 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || ||| | |||| || | ||||| | ||||| || Sbjct 8289852 ATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTG-TCGATCGTGTCTGATGACTCTAC 8289794 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || || | ||||| ||||| |||||||| Sbjct 8289793 CTCTAGGGTTATTGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCAT 8289746 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||| || | || | | ||||||||||||| |||||||| || Sbjct 19037896 CCACCACGAAGACGCAGCACAAGGTGAAGGGTTGACTCCTTTTGGATGTTGTAATCTGCA 19037837 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| || |||||||| | |||| || | |||||||| || | Sbjct 19037836 AGAGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTTTGTTGGTCTGGTGCG 19037777 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| ||| |||| ||||| | | ||||| | ||| || Sbjct 19037776 ATCCCTTCCTTGTCTTGGATCTTTGCCTTTACATTGT-CAATTGTGTCCGAGCTCTCAAC 19037718 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || || || ||||||||||||||||| Sbjct 19037717 TTCCAAAGTTATTGTCTTTCCGGTAAGGGTCTTTACAAAAATCTGCAT 19037670 >seq5 Length=13709650 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||||||| || ||| || ||| || || || || |||| Sbjct 13270565 GATTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCG 13270506 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || | ||||| |||||||| || || ||||| ||||| ||| || ||| | | Sbjct 13270505 AATATCAACCGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCTTGGATCTTCGCTTTCACA 13270446 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | ||||| | |||||||||||| | || | || || || || || ||||| Sbjct 13270445 TTGT-CGATCGTGTCTGACGACTCCACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTT 13270387 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 13270386 CACGAAGATCTGCAT 13270372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496257604864560