Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20rubella_20[refseq_20GCF_5F000375325.1_202013-04-23] 773 sequences; 133,063,876 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq6 143 3e-29 seq2 125 7e-24 seq1 107 2e-18 seq7 105 6e-18 seq4 100 3e-16 >seq6 Length=16577294 Score = 143 bits (158), Expect = 3e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | || |||||||| || || |||||||| ||| || || ||| ||| Sbjct 8339185 ACCAAATGAAGGGTTGACTCTTTCTGGATGTTGTAATCTGCCAAGGTACGGCCATCTTCT 8339126 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 |||||||| |||||| ||||||||| |||||||| ||||| ||||| ||||||||| | Sbjct 8339125 AGCTGTTTACCAGCGAAGATCAATCTTTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGG 8339066 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || ||| ||| | | || | |||||| | ||||| || |||| || | || ||| Sbjct 8339065 ATCTTCGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTG 8339006 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || ||||| || ||||| ||||| Sbjct 8339005 CCAGTGAGTGTTTTCACGAAAATTTGCAT 8338977 Score = 125 bits (138), Expect = 7e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | || ||||| || || || ||||| || ||| |||||| ||| || Sbjct 14991050 CACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATCCTC 14990991 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||||||||||||| |||| | |||||||| || ||||| || || ||||| ||| Sbjct 14990990 AAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATACCTTCCTTATCCTG 14990931 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| || ||| | |||| || | |||||| | |||||| || || | ||| | || | Sbjct 14990930 GATCTTGGCCTTCACGTTG-TCAATGGTGTCAGAACTCTCCACCTCCAAGGTGATAGTCT 14990872 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | ||||||| || || ||||| |||||||| Sbjct 14990871 TCCCGGTCAAGGTCTTGACAAAGATCTGCAT 14990841 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || ||| |||||| ||| || |||||||| ||| Sbjct 2562868 GTCGACTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGTTTGCCA 2562927 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | | |||||| || ||||| || || ||||||||| ||| || ||| Sbjct 2562928 GCGAAGATGAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTC 2562987 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | ||||| || || | ||| | || |||||||| ||||| Sbjct 2562988 ACGTTATCAATGGTGTCTGAGCTCTCAACCTCCAAGGTTATTGTCTTGCCGGTGAGAGTC 2563047 Query 127097 TTTACAAAAATCTGCAT 127113 || |||||||||||||| Sbjct 2563048 TTGACAAAAATCTGCAT 2563064 Score = 120 bits (132), Expect = 3e-22 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | |||||||| || || || |||||||| | Sbjct 735109 CCACCACGGAGACGAAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCCGCT 735168 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || |||||| |||| | || |||||| || || || Sbjct 735169 AGGGTGCGTCCATCTTCGAGCTGCTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGG 735228 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTT-GA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || ||||||||| ||| | | |||| || ||||| ||| ||||| | ||||| | Sbjct 735229 ATCCCTTCCTTGTCC-TGAATCTTGGCTTTGACGTTGT-CGATTGTGTCAGAGCTCTCCA 735286 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | || | || |||||||| || || || |||||||||||||| Sbjct 735287 CCTCCAAAGTGATGGTCTTGCCGGTTAGGGTCTTGACAAAAATCTGCAT 735335 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || || || || ||||| ||||| || || Sbjct 2562610 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGCC 2562669 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| ||||||||| |||| | |||||||| || ||||| Sbjct 2562670 AGTGTGCGACCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 2562729 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| ||||| ||| ||| || ||| | ||||| | | |||||| | ||||| || Sbjct 2562730 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGT-CAATGGTGTCGGAGCTCTCAAC 2562788 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || ||||||| || || |||||||||||||| Sbjct 2562789 CTCAAGGGTGATGGTCTTCCCGGTCAACGTCTTCACAAAAATCTGCAT 2562836 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | ||||| || | || ||||| || || || |||||||| | Sbjct 8339888 TCCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGC 8339829 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || || ||| ||| || ||||||||||||||| |||| | || |||||| || ||||| Sbjct 8339828 CAGTGTCCGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGG 8339769 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || |||||||| || || ||||| |||| || | |||||| | ||||| | Sbjct 8339768 GATCCCTTCCTTGTCTTGTATCTTGGCCTTGACGTTG-TCAATGGTGTCTGAGCTCTCAA 8339710 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | || | || ||||| |||| ||| || ||||| || ||||| Sbjct 8339709 CCTCCAACGTGATAGTCTTGCCTGTCAAAGTCTTCACAAAGATTTGCAT 8339661 Score = 114 bits (126), Expect = 1e-20 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||||||| | | || | || || || || ||||| Sbjct 14990353 GTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTCGAGTTGCTTTCCG 14990294 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| | |||||| || ||||| || ||||||||||| ||| || |||| Sbjct 14990293 GCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTTG-GCTTT 14990235 Query 127037 A--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | ||||| ||| |||||| | |||||| || |||| || | ||| || ||||| || | Sbjct 14990234 AACGTTGT-CGATGGTGTCAGAACTCTCCACCTCGAGAGTAATCGTCTTTCCGGTTAGGG 14990176 Query 127095 TTTTTACAAAAATCTGCAT 127113 |||| || ||||||||||| Sbjct 14990175 TTTTGACGAAAATCTGCAT 14990157 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||| | ||| | |||||||||||||| || |||||||| | Sbjct 6990198 CCACCACGGAGACGAAGCACGAGATGCAGGGTAGACTCTTTTTGGATGTTGTAATCAGCG 6990257 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || |||||||| || || |||| | || |||||| || || || Sbjct 6990258 AGGGTACGTCCGTCTTCAAGCTGTTTCCCGGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 6990317 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||| | ||| | | || ||||| | |||| ||||| | ||||| || Sbjct 6990318 ATCCCTTCCTTGT-CTTGAATCTTTGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAAC 6990376 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || |||||||| || || ||||||||||||||||| Sbjct 6990377 CTCCAAAGTGATAGTCTTGCCGGTTAGGGTCTTTACAAAAATCTGCAT 6990424 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || || || || || ||||||||||| | Sbjct 8339431 CCACCACGGAGACGAAGAACCAAGTGAAGGGTTGATTCCTTCTGGATATTGTAATCCGCA 8339372 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| |||| ||||| || || |||| | || ||||||||| || || Sbjct 8339371 AGTGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATAAGTCTCTGCTGATCCGGTGGG 8339312 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| || ||| ||| || ||| | | || | ||||| | |||||| || Sbjct 8339311 ATTCCCTCTTTATCCTGGATCTTAGCCTTAACATTGTCAATAGTGTCTGAACTCTCAACC 8339252 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | |||||||| |||| ||| || ||||| |||||||| Sbjct 8339251 TCAAGGGTGATGGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 8339205 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || || || || || || ||||| || ||| || || ||| || Sbjct 14990137 ACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAAGGTACGGCCATCCTCC 14990078 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | ||| ||||| ||| |||| | | ||||||||| || || ||||||||||||||| | Sbjct 14990077 AACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGG 14990018 Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||| | |||| |||| ||||| | || || || |||| ||| | || || Sbjct 14990017 ATCTTGGCCTTAACGTTG-TCGATTGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTT 14989959 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| ||||| || || || |||||||| Sbjct 14989958 TCCGGTGAGAGTCTTAACGAAGATCTGCAT 14989929 >seq2 Length=14066726 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||||| | || | ||||| |||||||| || |||||||| | Sbjct 7052923 CCACCACGAAGACGCAACACAAGGTGAAGAGTAGATTCTTTTTGGATGTTGTAATCCGCA 7052982 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || |||||||||||||| |||| | || |||||| || || || Sbjct 7052983 AGTGTGCGACCATCCTCAAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 7053042 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||| ||| ||| | | || |||| | |||| ||||| | |||||| || Sbjct 7053043 ATCCCCTCCTTATCC-TGAATCTTAGCTTTGACATTATCGATTGTGTCTGAACTCTCAAC 7053101 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || || || || || |||||||||||||| Sbjct 7053102 CTCCAAAGTTATGGTCTTTCCTGTGAGGGTCTTCACAAAAATCTGCAT 7053149 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | ||| | | ||||| || | || || || || || ||||||||||| || Sbjct 7053607 CCACCTCTTAACCTGAGAACCAAGTGGAGAGTTGATTCCTTCTGTATATTGTAATCCGCC 7053666 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || |||||||| || || ||||||||| |||||||| ||||| Sbjct 7053667 AAGGTACGTCCATCCTCAAGCTGTTTACCGGCAAAGATCAATCTTTGCTGATCCGGAGGG 7053726 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| ||| | | || ||| | | |||| ||||| | ||||| || Sbjct 7053727 ATCCCTTCCTTGTCC-TGAATCTTTGCCTTAACATTGTCGATAGTGTCAGAGCTCTCTAC 7053785 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| || || ||||| || ||||| ||||| Sbjct 7053786 CTCAAGAGTAATGGTCTTGCCAGTAAGTGTTTTCACGAAAATTTGCAT 7053833 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| ||||| || |||||||| | | |||||| ||| || |||||||| ||| Sbjct 7053181 GTAGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGACCATCTTCAAGCTGTTTCCCA 7053240 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | || ||| || || || || || || ||||||||| || || |||| Sbjct 7053241 GCAAAGATGAGTCTCTGTTGGTCTGGTGGGATTCCTTCCTTGTCCTGAATCTTAGCCTTG 7053300 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| | ||||| || || | || | || || ||||| || || Sbjct 7053301 ACGTTATCAATTGTGTCTGAGCTCTCAACCTCCAAAGTTATGGTCTTTCCGGTAAGGGTC 7053360 Query 127097 TTTACAAAAATCTGCAT 127113 || |||||||||||||| Sbjct 7053361 TTCACAAAAATCTGCAT 7053377 >seq1 Length=19566579 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||| | || | || ||||| ||||| || |||||||| | Sbjct 19037896 CCACCACGAAGACGCAGCACAAGGTGAAGGGTTGACTCCTTTTGGATGTTGTAATCTGCA 19037837 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || |||||||| |||||| |||| | || || || || || | Sbjct 19037836 AGAGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTTTGTTGGTCTGGTGCG 19037777 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| ||| || ||| | | || | ||||||| ||||| ||| Sbjct 19037776 ATCCCTTCCTTGTCTTGGATCTTTGCCTTTACATTGTCAATTGTGTCCGAGCTCTCAACT 19037717 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||| || || ||||||||||||||||| Sbjct 19037716 TCCAAAGTTATTGTCTTTCCGGTAAGGGTCTTTACAAAAATCTGCAT 19037670 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || || ||| | ||| | || |||||||| || || |||||||| | Sbjct 19037440 CCACCACGGAGTCTCAGCACAAGATGGAGGGTTGACTCTTTCTGGATGTTGTAATCTGCA 19037381 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || |||||||| || || |||| | || ||| || || || | | Sbjct 19037380 AGAGTGCGGCCATCTTCGAGCTGTTTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGAT 19037321 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| ||| || ||| | | |||| ||||| | ||||| ||| Sbjct 19037320 ATCCCTTCCTTGTCTTGGATCTTTGCCTTCACGTTATCGATCGTGTCAGAGCTCTCAACT 19037261 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||||||||| || || || || || |||||||| Sbjct 19037260 TCCAAAGTTATGGTTTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 19037214 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| || || ||| | ||| | || |||||||| || || |||||||| | Sbjct 19037668 CCACCACGTAGTCTCAGCACGAGATGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCA 19037609 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || |||||||||||||| | || | || || || || || | Sbjct 19037608 AGAGTGCGACCATCCTCAAGCTGTTTTCCAGCAAAAATGAGTCTTTGTTGGTCTGGTGCA 19037549 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| ||| || ||| | | || | ||||| | ||||| ||| Sbjct 19037548 ATCCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTATCAATTGTGTCAGAGCTCTCAACT 19037489 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || || || || ||||||||||||||||| Sbjct 19037488 TCCAAAGTTATAGTCTTTCCAGTAAGGGTCTTTACAAAAATCTGCAT 19037442 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || ||||| || || |||||||| | ||| ||| ||| || ||||| || || Sbjct 19037182 GTTGATTCTTTCTGGATGTTGTAATCTGAAAGCGTTCGACCATCTTCGAGCTGCTTGCCT 19037123 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | || | || ||| || || || | || || |||||||| ||| | | |||| Sbjct 19037122 GCAAATATGAGTCTCTGTTGGTCTGGTTGGATCCCTTCCTTGTCT-TGAATCTTAGCTTT 19037064 Query 127037 AG--TTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| | | |||||| | |||||||||||| | ||| | ||||| ||||| || | Sbjct 19037063 AACATTGT-CAATGGTGTCTGAACTCTCGACTTCTAGGGTAATGGTTTTACCGGTAAGGG 19037005 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || |||||||| Sbjct 19037004 TCTTGACGAATATCTGCAT 19036986 >seq7 Length=17303919 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||| | || ||||| || || || |||||||| | Sbjct 14231649 CCACCACGAAGACGAAGAACCAAATGCAGAGTTGACTCCTTCTGGATGTTGTAATCCGCA 14231708 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || || || || || || |||| | ||| || || || ||||| Sbjct 14231709 AGTGTCCGACCATCCTCGAGTTGCTTGCCCGCAAAGATAAGTCGTTGTTGGTCCGGAGGG 14231768 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| ||| || |||| | || | |||||| | ||||| ||| Sbjct 14231769 ATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCAATGGTGTCAGAGCTCTCAACT 14231828 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | ||||||||||| |||||||| ||||| || |||||| Sbjct 14231829 TCTAGAGTAATGGTTTTGCCGGTGAGAGTTTTCACAAATATTTGCATG 14231876 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || ||||| || |||||||||||||| | | || ||| ||| || Sbjct 14232351 ACCAAGTGAAGTGTTGACTCCTTCTGAATATTGTAATCAGCAAGGGTTCGACCATCCTCG 14232410 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || || || || || | ||| | || ||||| || || | || || ||||||| | Sbjct 14232411 AGTTGCTTGCCCGCATGGATAAGTCTTTGCTGGTCCGGTAGGATTCCTACCTTGTCTTGG 14232470 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||||| | || | |||||| | ||||| ||||| | | | |||||| Sbjct 14232471 ATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACTTCTAGAATAATGGTTTTG 14232530 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||||| |||||||| ||||| || |||||| Sbjct 14232531 CCGGTGAGAGTTTTCACAAATATTTGCATG 14232560 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||||||||| | || | || | || | ||||||||||| || ||||||||||| | Sbjct 14231192 TCCACCGCGGAGACGAAGAACAAGGTGAAGAGTAGACTCTTTCTGGATATTGTAATCTGC 14231251 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || ||| ||| || || ||||| || || |||| | || |||||| || || | Sbjct 14231252 AAGTGTTCGACCATCTTCGAGTTGTTTACCGGCAAAGATTAGTCTCTGCTGGTCCGGTGT 14231311 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || || ||||| || || ||| | | || | || || | |||||||| Sbjct 14231312 GATCCCTTCTTTGTCTTGAATCTTGGCCTTCACGTTATCAATCGTATCAGAGCTCTCGAC 14231371 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | |||||||| |||| ||| || |||||||||||||| Sbjct 14231372 CTCTAGAGTGATGGTTTTGCCCGTCAAAGTCTTGACAAAAATCTGCAT 14231419 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| |||| || ||||| || |||||||||||||| ||| || || ||| || Sbjct 14232123 ACCAAGTGTAGAGTTGACTCCTTCTGAATATTGTAATCCGCCAAAGTACGGCCATCCTCA 14232182 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || || || || || ||||| | || |||||| || | | || || |||||||| | Sbjct 14232183 AGTTGCTTCCCCGCATAGATAAGTCTCTGCTGGTCCAGTAGGATTCCTTCCTTGTCTTGG 14232242 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||||| | || | |||||| | || || ||||| | | | || ||| Sbjct 14232243 ATCTTGGCCTTGACATTATCAATGGTGTCGGAGCTTTCAACTTCAAGAATTATGGTCTTG 14232302 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || || ||||| || ||||| || |||||| Sbjct 14232303 CCAGTTAGAGTCTTAACAAAGATTTGCATG 14232332 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| |||| || ||||| |||||||||||||| || ||| || ||| ||| || Sbjct 14232579 ACCAAGTGTAGAGTTGACTCCTTTTGAATATTGTAGTCAGCCAATGTACGACCATCTTCA 14232638 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || || || || || |||| | | |||||| || |||| || || ||||| || | Sbjct 14232639 AGTTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCCGGAGTAATACCTTCCTTATCTTGG 14232698 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||||| | || | ||||| | || || || || | || | || || Sbjct 14232699 ATCTTAGCCTTGACATTGTCAATCGTGTCAGAGCTTTCAACCTCAAGAGTTATGGTCTTC 14232758 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| ||||| || ||||| |||||||| Sbjct 14232759 CCGGTAAGAGTCTTAACAAAGATCTGCAT 14232787 >seq4 Length=14994381 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||| ||| | | || || || || ||||| ||||| Sbjct 14616795 CGTTGACTCCTTCTGGATGTTGTAGTCGGCTAAGGTTCGTCCGTCCTCGAGCTGCTTTCC 14616736 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 ||| | |||||||||||||| || || || || || ||||||||| ||| || ||| Sbjct 14616735 GGCGAAAATCAATCGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCCTGGATCTTGGCCTT 14616676 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | |||| |||||| | ||| || |||| ||| | ||| || || || || || Sbjct 14616675 CACATTGTCGATGGTGTCAGATGACTCTACCTCGAGGGTGATCGTCTTCCCCGTTAGGGT 14616616 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| || || |||||||| Sbjct 14616615 TTTCACGAAGATCTGCAT 14616598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475496205473520