Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20rubella_20[refseq_20GCF_5F000375325.1_202013-04-23] 773 sequences; 133,063,876 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2 125 5e-24 seq6 113 3e-20 seq1 100 2e-16 seq7 95.1 8e-15 seq5 95.1 8e-15 seq4 89.7 3e-13 >seq2 Length=14066726 Score = 125 bits (138), Expect = 5e-24 Identities = 160/218 (73%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| || | ||||| || |||||| || ||||| || |||| ||| | || |||| Sbjct 7052937 CAACACAAGGTGAAGAGTAGATTCTTTTTGGATGTTGTAATCCGCAAGTGTGCGACCATC 7052996 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||||||||| ||||| || |||| ||||||||| | || | ||||||||| || Sbjct 7052997 CTCAAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCCTCCTTATC 7053056 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTA 34944 |||||| |||||| || ||||||| || |||||| || | |||| Sbjct 7053057 CTGAATCTTAGCTTTGAC--AT--TATCGATTGTGTCTGAACTCTCAACCTCCAAAGTTA 7053112 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| ||||| ||||| ||||||||||| ||||||||| Sbjct 7053113 TGGTCTTTCCTGTGAGGGTCTTCACAAAAATCTGCATA 7053150 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || || ||||| || || | |||| | || |||| || |||||||| || ||||| Sbjct 7053187 TCCTTTTGGATGTTGTAATCAGCAAGGGTGCGACCATCTTCAAGCTGTTTCCCAGCAAAG 7053246 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || |||| || |||||| | || | || |||||||| |||||| |||||| Sbjct 7053247 ATGAGTCTCTGTTGGTCTGGTGGGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACGTTA 7053306 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | |||||| || | |||||||| ||||| || || ||||||||| Sbjct 7053307 TCAATTGTGTCTGAGCTCTCAACCTCCAAAGTTATGGTCTTTCCGGTAAGGGTCTTCACA 7053366 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 7053367 AAAATCTGCATA 7053378 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCA 34829 ||||||||| | || ||| || || |||||||| || | |||| | || |||| Sbjct 7052712 AACCAAGTGGAGAGTTGATTCCTTTTGGATGTTATAATCAGCCAAAGTC--CGACCATCC 7052769 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || |||||||| || ||||| || |||| ||||||||| | || | |||||| ||||| Sbjct 7052770 TCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCCTCTTTGTCC 7052829 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 |||||| |||||| | || | || | |||||| || | ||| || || Sbjct 7052830 TGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTC 7052889 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | || ||||||||||| |||||| Sbjct 7052890 TTACCTGTCAATGTTTTCACAAAGATTTGCATA 7052922 >seq6 Length=16577294 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || || ||||| ||||| || |||| ||| | ||| |||| || Sbjct 734899 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTGCGTCCATCTTCG 734958 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || |||| ||||||||| | || | ||| |||||||| | Sbjct 734959 AGCTGCTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGA 735018 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || ||||||| | || | || | |||||| || | || ||||| ||| Sbjct 735019 ATTTTAGCTTTGACGTTGTCGATTGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTCTTT 735078 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| |||||||||||||| |||||| Sbjct 735079 CCGGTGAGGGTCTTCACAAAGATTTGCATA 735108 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| ||| |||||||| ||||| ||||| | || | || |||| || Sbjct 735355 ACCAAATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCTAGTGTACGGCCATCCTCT 735414 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || | || ||||| | || | || |||||||| Sbjct 735415 AGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGGATACCTTCCTTGTCCTGG 735474 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | ||| | |||||| |||| ||| ||||| || Sbjct 735475 ATCTTTGCCTTGACGTTGTCGATAGTGTCAGAGCTCTCAACCTCGAGGGTGATGGTCTTG 735534 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||||||||| ||||||||||||||| Sbjct 735535 CCGGTGAGAGTCTTGACAAAGATCTGCATA 735564 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| ||| ||||||||||| ||||| | | | | || |||| || Sbjct 2563540 ACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGGCCATCTTCG 2563599 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||||||||| || || | |||||| || | || | || |||||||| Sbjct 2563600 AGCTGCTTTCCGGCAAAGATAAGCCTTTGCTGATCCGGAGGGATACCTTCCTTGTCCTGG 2563659 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | ||| | || || |||| ||| || || || Sbjct 2563660 ATCTTGGCCTTAACGTTGTCGATTGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTC 2563719 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||||||||| |||||||||||||| Sbjct 2563720 CCGGTGAGAGTCTTAACAAAGATCTGCAT 2563748 Score = 96.9 bits (106), Expect = 2e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || || ||||| ||||| || || | ||| | || |||| || Sbjct 6989987 AACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCTGCAAGAGTCCGACCATCCTC 6990046 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||||| || || || || |||| ||||||||| | || | ||| |||||||| Sbjct 6990047 AAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTG 6990106 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||||| ||| ||| | || | || | |||||| || | || ||||| || Sbjct 6990107 AATCTTGGCTTTAACGTTATCAATAGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTCTT 6990166 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||||||||| || |||||| Sbjct 6990167 GCCGGTAAGGGTCTTCACAAAAATTTGCATA 6990197 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| ||| ||||| ||||| ||||| | | | | || |||| ||| Sbjct 14990137 ACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAAGGTACGGCCATCCTCC 14990078 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| |||||||| || || || | ||||| || | || | ||||||||||| Sbjct 14990077 AACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGG 14990018 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | ||| | || || |||| ||| || || ||| Sbjct 14990017 ATCTTGGCCTTAACGTTGTCGATTGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTT 14989958 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||||||||| || ||||||||||| Sbjct 14989957 CCGGTGAGAGTCTTAACGAAGATCTGCAT 14989929 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| || | ||| |||||||| ||||| || || | | | | || |||| || Sbjct 6990444 ACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGCCAAGGTGCGACCATCCTCT 6990503 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || | ||||| || | || | ||||| || || Sbjct 6990504 AGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGGATTCCCTCTTTATCTTGG 6990563 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | |||||| || | ||| || ||||| Sbjct 6990564 ATCTTAGCTTTGACATTGTCAATGGTATCTGAGCTCTCAACCTCTAGGGTGATTGTTTTA 6990623 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||||||||||||||||||||||||| Sbjct 6990624 CCAGTGAGAGTCTTCACAAAGATCTGCATA 6990653 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| || |||| || | || |||| || |||||||| || || || Sbjct 8339623 TCCTTCTGAATGTTGTAATCCGCTAGTGTGCGACCATCCTCAAGCTGTTTACCAGCGAAG 8339564 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || |||| ||| |||||| | || | ||| ||||| || |||||| |||||| Sbjct 8339563 ATGAGTCTTTGTTGGTCTGGTGGGATCCCTTCCTTTTCCTGAATCTTAGCCTTGACGTTA 8339504 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | |||||| || | ||| || || || || || | |||||||||| Sbjct 8339503 TCAATTGTGTCTGAGCTCTCAACTTCCAAGGTGATAGTCTTGCCAGTCAAAGTCTTCACA 8339444 Query 34971 AAGATCTGCATA 34982 || || |||||| Sbjct 8339443 AAAATTTGCATA 8339432 Score = 89.7 bits (98), Expect = 3e-13 Identities = 153/218 (70%), Gaps = 8/218 (4%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || || ||||| ||||| ||||| | | | | || |||| Sbjct 14990825 CAAGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGACCATC 14990766 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| ||| ||||||||||| || | | |||||||| | || | ||||| ||||| Sbjct 14990765 CTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCTTTGTC 14990706 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTA 34944 ||||| || || | | ||||| | ||| || ||||| || | ||| | Sbjct 14990705 CTGGATCTTGGCCTTCAC----GTTGTCGATGGTGTCCGAGCTTTCAACTTCCAAGGTGA 14990650 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || ||||| |||||||| ||||| |||||||||||| Sbjct 14990649 TTGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCATA 14990612 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || || ||||| ||||| || || | || | || |||| || Sbjct 8339870 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCCAGTGTCCGACCATCCTC 8339811 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||||||||| || || || |||| |||||||| | || | ||| |||||||| Sbjct 8339810 AAGCTGTTTTCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTCTTG 8339751 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| |||||| | || | || | |||||| || | || || || || Sbjct 8339750 TATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAACGTGATAGTCTT 8339691 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||||||||||||| |||||| Sbjct 8339690 GCCTGTCAAAGTCTTCACAAAGATTTGCATA 8339660 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || ||| ||||||||||| ||||| | || | || | || || Sbjct 2562628 ACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGCCAGTGTGCGACCGTCCTCA 2562687 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| || || || || || |||||||| | || | || ||||| || Sbjct 2562688 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGG 2562747 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | || | |||||| || | ||| ||||| || Sbjct 2562748 ATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTTC 2562807 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||||||||| ||||||||| Sbjct 2562808 CCGGTCAACGTCTTCACAAAAATCTGCATA 2562837 >seq1 Length=19566579 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| |||| | | ||||| |||| || |||||||| ||||| ||||| | Sbjct 8289972 CCTCCTCTCAGACGGAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGCG 8289913 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || ||| | || ||||||||||| ||||| || || || || |||||||| | || Sbjct 8289912 AGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGGG 8289853 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||| |||||||| |||||| ||| || | |||| || | ||| || Sbjct 8289852 ATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGATGACTCTACC 8289793 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | |||||| || || ||||| | || ||||||||||||||||| || Sbjct 8289792 TCTAGGGTTATTGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCATTTT 8289743 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| || || | ||| | || |||| || |||||||| || ||||| Sbjct 19037404 TCTTTCTGGATGTTGTAATCTGCAAGAGTGCGGCCATCTTCGAGCTGTTTGCCTGCAAAG 19037345 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || |||| || |||||| | | | ||| |||||||| ||||| || ||| Sbjct 19037344 ATGAGTCTCTGTTGGTCTGGTGATATCCCTTCCTTGTCTTGGATCTTTGCCTTCACGTTA 19037285 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||| | |||||| || | ||||||||||| || || || ||||| || Sbjct 19037284 TCGATCGTGTCAGAGCTCTCAACTTCCAAAGTTATGGTTTTGCCGGTAAGGGTCTTGACG 19037225 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 19037224 AAGATCTGCAT 19037214 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| || || | ||| | || |||| || ||||||||||| ||||| Sbjct 19037632 TCTTTCTGGATGTTGTAATCAGCAAGAGTGCGACCATCCTCAAGCTGTTTTCCAGCAAAA 19037573 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || |||| ||| |||||| | | | ||| |||||||| ||||| || ||| Sbjct 19037572 ATGAGTCTTTGTTGGTCTGGTGCAATCCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTA 19037513 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | |||||| || | ||||| || ||||| || || ||||| ||| Sbjct 19037512 TCAATTGTGTCAGAGCTCTCAACTTCCAAAGTTATAGTCTTTCCAGTAAGGGTCTTTACA 19037453 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 19037452 AAAATCTGCAT 19037442 >seq7 Length=17303919 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || |||||||| | ||||||||||| ||| || |||||||| || || || | | Sbjct 14232333 CCACCTCTCAACCTAAGAACCAAGTGAAGTGTTGACTCCTTCTGAATATTGTAATCAGCA 14232392 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| |||| |||| || || || || || ||| || |||| ||||||||| | | Sbjct 14232393 AGGGTTCGACCATCCTCGAGTTGCTTGCCCGCATGGATAAGTCTTTGCTGGTCCGGTAGG 14232452 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || ||||||| ||||| ||||| | || | ||| | |||||| Sbjct 14232453 ATTCCTACCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACT 14232512 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | | |||||||| || |||||||| |||||||| || ||||| Sbjct 14232513 TCTAGAATAATGGTTTTGCCGGTGAGAGTTTTCACAAATATTTGCAT 14232559 >seq5 Length=13709650 Score = 95.1 bits (104), Expect = 8e-15 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| | || | || | || |||||||| || ||||| || Sbjct 13270563 TTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCGAA 13270504 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 ||| | || |||||||| | || | ||| |||||||| |||||| ||| || Sbjct 13270503 TATCAACCGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATT 13270444 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | |||| || | ||| || || | ||||||||| || ||||| || || ||||| Sbjct 13270443 GTCGATCGTGTCTGACGACTCCACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCAC 13270384 Query 34970 AAAGATCTGCATATT 34984 ||||||||||| || Sbjct 13270383 GAAGATCTGCATCTT 13270369 >seq4 Length=14994381 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | | | ||||| | || || ||||| |||||||| || Sbjct 14616788 TCCTTCTGGATGTTGTAGTCGGCTAAGGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAA 14616729 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | ||| |||||||| |||| | || |||||||| ||||| || || || Sbjct 14616728 ATCAATCGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCAC--AT 14616671 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| ||| | ||| || |||| ||| || || || ||||| || || || Sbjct 14616670 --TGTCGATGGTGTCAGATGACTCTACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTT 14616613 Query 34967 CACAAAGATCTGCATATT 34984 ||| ||||||||||| || Sbjct 14616612 CACGAAGATCTGCATCTT 14616595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324630541647144