Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20rubella_20[refseq_20GCF_5F000375325.1_202013-04-23] 773 sequences; 133,063,876 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq6 132 4e-26 seq7 125 6e-24 seq2 122 7e-23 seq1 114 1e-20 seq5 96.9 3e-15 >seq6 Length=16577294 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || |||||||| ||||| || || ||||||||||| || | || | | Sbjct 8339420 ACGAAGAACCAAGTGAAGGGTTGATTCCTTCTGGATATTGTAATCCGCAAGTGTGCGACC 8339361 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || ||||| ||||| ||||| || | | ||| ||||| || || || || ||||| Sbjct 8339360 ATCCTCTAATTGTTTACCGGCAAAGATAAGTCTCTGCTGATCCGGTGGGATTCCCTCTTT 8339301 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||| || || || || ||| | || | |||||| || | || || ||||| |||| Sbjct 8339300 ATCCTGGATCTTAGCCTTAACATTGTCAATAGTGTCTGAACTCTCAACCTCAAGGGTGAT 8339241 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| || ||||| || ||||| |||||||| Sbjct 8339240 GGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 8339205 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||||||| | ||| ||||| ||||| || ||||| || || ||||||||||| Sbjct 6990882 CCACCTCTTAAACGGAGAACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGCC 6990941 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| || | || ||||| || || ||||| | || || || || ||| Sbjct 6990942 AAGGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGAGGA 6991001 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || ||| || ||| | || | |||||||| | || || Sbjct 6991002 ATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCGACC 6991061 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||| || || || || | ||||| || || || ||||| Sbjct 6991062 TCAAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 6991108 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | ||| | || ||||||||||| || ||||| || || ||||| || || Sbjct 735337 CCACCTCTCAGACGAAGCACCAAATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCT 735396 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| || | |||||||| ||||| || | | |||||| || || || Sbjct 735397 AGTGTACGGCCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGG 735456 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || || || || ||| || || | || | ||||||||| | || || Sbjct 735457 ATACCTTCCTTGTCCTGGATCTTTGCCTTGACGTTGTCGATAGTGTCAGAGCTCTCAACC 735516 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || |||||||| | ||| || ||||| |||||||| Sbjct 735517 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 735563 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | ||||||||| || || || || || ||||||||||| | |||||| | || || Sbjct 14990366 AACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTC 14990307 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | |||||| || || || ||||| | ||| || || || || || || || || ||||| Sbjct 14990306 GAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTG 14990247 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || ||| || | || | |||||||| | ||||| || ||||| | ||| || Sbjct 14990246 GATCTTGGCTTTAACGTTGTCGATGGTGTCAGAACTCTCCACCTCGAGAGTAATCGTCTT 14990187 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||||| ||||| || || |||||||| Sbjct 14990186 TCCGGTTAGGGTTTTGACGAAAATCTGCAT 14990157 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || || | ||| || || ||||| || || || || || |||||||| || Sbjct 735565 CCACCTCTCAACCGGAGAACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCC 735624 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| || | || ||||| || || || || | ||| ||||| || ||| Sbjct 735625 AAGGTACGGCCATCTTCGAGCTGTTTACCAGCGAAGATTAATCTCTGCTGATCCGGAGGA 735684 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || ||| || ||| | || | ||||| || | || || Sbjct 735685 ATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCTGAGCTCTCGACC 735744 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||||| || ||||| |||| ||||| ||||| || ||||| Sbjct 735745 TCGAGAGTGATGGTCTTGCCAGTTAGTGTTTTCACAAAAATTTGCAT 735791 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | || | ||| ||||||||||| || ||||| || || |||||||| || Sbjct 8339203 CCACCTCTCAGCCGGAGAACCAAATGAAGGGTTGACTCTTTCTGGATGTTGTAATCTGCC 8339144 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| || | || ||||| || || ||||| | || ||||| || ||| Sbjct 8339143 AAGGTACGGCCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTTTGCTGATCCGGAGGA 8339084 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || ||| | || | |||||||| | || || Sbjct 8339083 ATGCCTTCCTTGTCCTGGATCTTCGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAACC 8339024 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||||| || ||||| || | ||||| || || || ||||| Sbjct 8339023 TCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 8338977 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| || || || ||||||||||| || ||||| || ||||| || || Sbjct 14990611 CCTCCACGCAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCC 14990552 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || ||||| ||||| || ||||| ||||| | ||| || || || || Sbjct 14990551 AAGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGG 14990492 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || ||||| || || || || || || | || | |||||||| | ||||| Sbjct 14990491 ATACCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAACTCTCCACC 14990432 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| || || ||||| || || || ||||| || ||||| Sbjct 14990431 TCCAAGGTGATAGTCTTCCCGGTCAACGTCTTGACAAAGATTTGCAT 14990385 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | ||| | || ||||| ||||| || ||||| || || |||||||| || Sbjct 6990426 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGCC 6990485 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || | |||||||| ||||| || | | ||| ||||| || || Sbjct 6990486 AAGGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGG 6990545 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || ||||||||||| || || ||| ||| | || | || || || | || || Sbjct 6990546 ATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATGGTATCTGAGCTCTCAACC 6990605 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| ||||| || || | ||| || ||||| |||||||| Sbjct 6990606 TCTAGGGTGATTGTTTTACCAGTGAGAGTCTTCACAAAGATCTGCAT 6990652 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | |||||| ||||| || || || || || || || || | ||| ||| | || || Sbjct 2563083 AACAAGATGAAGTGTAGACTCCTTCTGGATGTTATAGTCAGCCAAAGTCCTGCCGTCTTC 2563142 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | |||||| || || || ||||| | ||| || || || || || || || |||||||| Sbjct 2563143 AAGTTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGTGGGATTCCCTCCTTATCTTG 2563202 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 |||||| ||| ||| | || | |||||||| | ||||| || | ||| | || || Sbjct 2563203 AATTTTAGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCACCTCCAAAGTAATAGTCTT 2563262 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | ||||| || || |||||||| Sbjct 2563263 TCCAGTAAGGGTTTTGACGAAGATCTGCAT 2563292 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || ||||| |||||||| || || | ||| || | || || | ||| Sbjct 6990678 TGAAGGGTCGACTCCTTTTGGATATTGTAGTCAGCAAGAGTCCTTCCGTCTTCAAGCTGC 6990737 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || ||||| | | ||| || || || || || || ||||||||||| || || Sbjct 6990738 TTGCCCGCGAATATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCTTGGATCTTG 6990797 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | ||||| || | || || || || |||| |||||||| || Sbjct 6990798 GCTTTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCGAGGGTGATGGTTTTGCCAGTC 6990857 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || ||||| |||||||| Sbjct 6990858 AAGGTCTTCACAAAGATCTGCAT 6990880 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||||||||| || || || || |||||||| || | || | |||| || Sbjct 735127 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCCGCTAGGGTGCGTCCATCTTCG 735186 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || || | | ||| || || || || || ||||| || || ||| Sbjct 735187 AGCTGCTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGA 735246 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || ||| || | || | |||||||| | ||||| || | ||||| || ||| Sbjct 735247 ATCTTGGCTTTGACGTTGTCGATTGTGTCAGAGCTCTCCACCTCCAAAGTGATGGTCTTG 735306 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||||| || || ||||| |||||||| Sbjct 735307 CCGGTTAGGGTCTTGACAAAAATCTGCAT 735335 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||||||||| || ||||| || ||||| || || | ||| | |||| || | || Sbjct 14991272 ATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCAAGCTG 14991213 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || || || || || | |||||| || || || || || ||||| || || || || || Sbjct 14991212 TTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTT 14991153 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | ||||| || | |||||||| || |||| || || ||||| Sbjct 14991152 GGCCTTCACATTGTCAATGGTGTCGGAGCTCTCCACTTCCAGTGTGATGGTCTTCCCGGT 14991093 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 || || || ||||| |||||||| Sbjct 14991092 CAAGGTCTTGACAAAGATCTGCAT 14991069 >seq7 Length=17303919 Score = 125 bits (138), Expect = 6e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| ||||| || || || || || || || |||||||| || | || | | Sbjct 14231660 ACGAAGAACCAAATGCAGAGTTGACTCCTTCTGGATGTTGTAATCCGCAAGTGTCCGACC 14231719 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || ||||| || | || ||||| || || || || ||||| || Sbjct 14231720 ATCCTCGAGTTGCTTGCCCGCAAAGATAAGTCGTTGTTGGTCCGGAGGGATCCCTTCCTT 14231779 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || || ||| ||| | || | |||||||| | || ||||| ||||| | Sbjct 14231780 GTCTTGGATCTTGGCTTTGACATTGTCAATGGTGTCAGAGCTCTCAACTTCTAGAGTAAT 14231839 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||||||||| | |||||| |||||||| |||||| Sbjct 14231840 GGTTTTGCCGGTGAGAGTTTTCACAAATATTTGCATG 14231876 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| || | | ||| | ||| | ||||| ||||| ||||| || ||||||||||| | Sbjct 14231191 TTCCACCGCGGAGACGAAGAACAAGGTGAAGAGTAGACTCTTTCTGGATATTGTAATCTG 14231250 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | |||| |||| || | ||| ||||| ||||| || | | ||| || || || | Sbjct 14231251 CAAGTGTTCGACCATCTTCGAGTTGTTTACCGGCAAAGATTAGTCTCTGCTGGTCCGGTG 14231310 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 || |||||||| |||||||| || || || | || | || ||||| | || | Sbjct 14231311 TGATCCCTTCTTTGTCTTGAATCTTGGCCTTCACGTTATCAATCGTATCAGAGCTCTCGA 14231370 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || ||||||| |||||||| || ||||| || ||||| |||||||| Sbjct 14231371 CCTCTAGAGTGATGGTTTTGCCCGTCAAAGTCTTGACAAAAATCTGCAT 14231419 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||||||||| || || || || || |||||||| || | ||| | | || || | ||| Sbjct 14231900 ATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCCAAAGTACGACCGTCCTCGAGTTG 14231959 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||||||||||| || | | ||| || || || | |||||||| |||||||| || || Sbjct 14231960 TTTACCTGCAAAAATAAGTCTCTGCTGGTCCGGAGTGATGCCTTCCTTATCTTGGATCTT 14232019 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | |||||||| |||| || |||||||| | || ||||| || Sbjct 14232020 CGCCTTCACATTGTCAATCGTGTCAGAACTTTCGACCTCAAGAGTTATGGTCTTGCCCGT 14232079 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | || || ||||| || |||||| Sbjct 14232080 AAGGGTCTTAACAAAGATTTGCATG 14232104 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || | | ||| || || || || || || || || ||||||||||| || Sbjct 14232105 CCTCCTCTCAACCTAAGAACCAAGTGTAGAGTTGACTCCTTCTGAATATTGTAATCCGCC 14232164 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | |||||| || ||| | || | | ||| || || | | Sbjct 14232165 AAAGTACGGCCATCCTCAAGTTGCTTCCCCGCATAGATAAGTCTCTGCTGGTCCAGTAGG 14232224 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || ||| | || | ||||| || |||| ||| Sbjct 14232225 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCGGAGCTTTCAACT 14232284 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||||| | | || ||||| |||| ||| || ||||| || |||||| Sbjct 14232285 TCAAGAATTATGGTCTTGCCAGTTAGAGTCTTAACAAAGATTTGCATG 14232332 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | | ||| || ||||| || || || || || ||||||||||| || Sbjct 14232333 CCACCTCTCAACCTAAGAACCAAGTGAAGTGTTGACTCCTTCTGAATATTGTAATCAGCA 14232392 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||| |||| || | |||||| || ||| || | | || || || || | Sbjct 14232393 AGGGTTCGACCATCCTCGAGTTGCTTGCCCGCATGGATAAGTCTTTGCTGGTCCGGTAGG 14232452 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||| | || ||||| || || || ||| | || | |||||||| | || ||| Sbjct 14232453 ATTCCTACCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACT 14232512 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||| | | ||||||||||| | |||||| |||||||| |||||| Sbjct 14232513 TCTAGAATAATGGTTTTGCCGGTGAGAGTTTTCACAAATATTTGCATG 14232560 >seq2 Length=14066726 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | | ||| || || || || ||||| || |||||||||||||| || Sbjct 7053607 CCACCTCTTAACCTGAGAACCAAGTGGAGAGTTGATTCCTTCTGTATATTGTAATCCGCC 7053666 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || | || ||||| ||||| ||||| | || ||||| || || Sbjct 7053667 AAGGTACGTCCATCCTCAAGCTGTTTACCGGCAAAGATCAATCTTTGCTGATCCGGAGGG 7053726 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || || ||||| ||| || ||| | || | ||||||||| | || || Sbjct 7053727 ATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATAGTGTCAGAGCTCTCTACC 7053786 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| | || ||||| || | ||||| || || || ||||| Sbjct 7053787 TCAAGAGTAATGGTCTTGCCAGTAAGTGTTTTCACGAAAATTTGCAT 7053833 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || | ||||| |||||||||||||| || |||||||| || | || | | Sbjct 7052934 ACGCAACACAAGGTGAAGAGTAGATTCTTTTTGGATGTTGTAATCCGCAAGTGTGCGACC 7052993 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | || || || ||||| || | | ||| || || || || || || || || Sbjct 7052994 ATCCTCAAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCCTCCTT 7053053 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||| ||||| || ||| ||| | || | ||||| || | || || || | ||| | Sbjct 7053054 ATCCTGAATCTTAGCTTTGACATTATCGATTGTGTCTGAACTCTCAACCTCCAAAGTTAT 7053113 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | || || ||||| |||||||| Sbjct 7053114 GGTCTTTCCTGTGAGGGTCTTCACAAAAATCTGCAT 7053149 >seq1 Length=19566579 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| |||||||| || || |||||||| | | |||| |||| || | ||| Sbjct 19037188 TGAAGGGTTGATTCTTTCTGGATGTTGTAATCTGAAAGCGTTCGACCATCTTCGAGCTGC 19037129 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || ||||||||||| | | |||||| || || | || ||||| || |||||||| || Sbjct 19037128 TTGCCTGCAAATATGAGTCTCTGTTGGTCTGGTTGGATCCCTTCCTTGTCTTGAATCTTA 19037069 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | ||||| || | || ||||| || || | ||||| ||||| Sbjct 19037068 GCTTTAACATTGTCAATGGTGTCTGAACTCTCGACTTCTAGGGTAATGGTTTTACCGGTA 19037009 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || ||||||||||| Sbjct 19037008 AGGGTCTTGACGAATATCTGCAT 19036986 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| || ||||| || || |||||||| || | ||| | | |||| || | || Sbjct 19037417 ATGGAGGGTTGACTCTTTCTGGATGTTGTAATCTGCAAGAGTGCGGCCATCTTCGAGCTG 19037358 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || |||||||| || | | |||||| || || | || ||||| || ||||| || || Sbjct 19037357 TTTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGATATCCCTTCCTTGTCTTGGATCTT 19037298 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | || || | || | |||||||| | || ||||| | ||| | ||||||||||| Sbjct 19037297 TGCCTTCACGTTATCGATCGTGTCAGAGCTCTCAACTTCCAAAGTTATGGTTTTGCCGGT 19037238 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 19037237 AAGGGTCTTGACGAAGATCTGCAT 19037214 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | ||||| || || ||||| || || |||||||| || | ||| | Sbjct 19038113 ACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCCGCTAAAGTGTGACC 19038054 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | ||||| |||||||| | | | |||||| || || | || |||||||| Sbjct 19038053 ATCTTCGAGCTGCTTCCCTGCAAAGTTAAGCCTCTGTTGGTCCGGGTGGATCCCTTCTTT 19037994 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || ||||| | | || ||| | || | || ||| | ||||||| ||||| |||| Sbjct 19037993 GTCCTGAATCTGTGCCTTCACATTGTCAATCGTATCAAAGCTTTCCACCTCAAGCGTGAT 19037934 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || || ||| || |||||||||||||| Sbjct 19037933 GGTGCTTCCCGTCAAATCCTTAACAAATATCTGCAT 19037898 >seq5 Length=13709650 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || || ||| ||||| || || || ||||| | || ||||||| || Sbjct 4166026 CCACCTCTCAACTTTAGAACCAAATGGAGAGTTGACTCTTTCGGAATGCTGTAATCAGCC 4166085 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || | || ||||| ||||| |||| | || || || | || Sbjct 4166086 AAGGTACGACCATCCTCGAGCTGTTTACCGGCAAAGATCATTTGTTGCTGGTCAAGAGGG 4166145 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT--ACAGTGTCAGACGTTTCCA 101420 || |||||||||||||| || ||||| ||| | ||| | | |||| || |||| | Sbjct 4166146 ATTCCTTCTTTATCTTGGATCTTTTGCCTTA-ACTTTGTGGATCATGTCGGAGCTTTCGA 4166204 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | | |||||| || || ||||| || | | |||| ||||| |||||||| Sbjct 4166205 CCTTAAGAGTTACGGTCTTGCCTGTAAGACTTTTGACAAAGATCTGCAT 4166253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396274666685961