Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20rubella_20[refseq_20GCF_5F000375325.1_202013-04-23] 773 sequences; 133,063,876 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 187 2e-41 seq3 172 4e-37 seq6 170 1e-36 seq7 123 2e-22 seq2 109 4e-18 seq4 87.8 1e-11 >seq1 Length=19566579 Score = 187 bits (206), Expect = 2e-41 Identities = 547/832 (66%), Gaps = 17/832 (2%) Strand=Plus/Minus Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399 ||||| || |||| || | ||| || ||||||||| | |||||||| |||||||| Sbjct 5572683 GAAGAAGGCGTTTTTGAAGTGAAAGCCACCGCTGGAGATACTCATCTTGGAGGTGAAGAC 5572624 Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTG 475457 ||||| || ||||| || | ||| | | || || |||| ||||||| | || | Sbjct 5572623 TTTGACAACAGACTCGTGAACCAT--TTCGCTGCGGAGTTCAGGAGGAAACACAAGAAGG 5572566 Query 475458 ATCTTTCAACATCTGCTAAAGCA-TTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAG 475516 || || | ||| | || ||| || || | || || |||||||| | || ||| Sbjct 5572565 ATATTGCTGGGAATGCGAGGGCTCTTAGGAGGT-TGAGGACGGCTTGTGAGAGGGCAAAG 5572507 Query 475517 CGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATT 475576 || | |||||||| | | || || ||| |||| |||||||||| ||| || || Sbjct 5572506 AGAACGCTTTCTTCCACAGCCCAGACAACTATTGAGATTGATTCTCTGCATGAGGGTATC 5572447 Query 475577 GATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGA 475636 || | || | || || | || | ||||| || || ||| | || || Sbjct 5572446 GACTTCTATGCGACCATCTCACGTGCCAGGTTTGAGGAGATGAACATGGATTTGTTCAGG 5572387 Query 475637 AAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTC 475696 ||| || || || || || ||||||| | ||| | || |||||||| | | || Sbjct 5572386 AAATGTATGGATCCTGTGGAGAAAGTTCTTAAAGACGCCAAGCTTGACAAGGCCCGTGTG 5572327 Query 475697 CATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTT-- 475754 || || | |||||||| ||||| || ||||| ||||| ||||| | | ||||| Sbjct 5572326 CACGAGGTGGTTCTTGTCGGAGGATCTACAAGGATTCCGAAAATTCAACA---GCTTTTG 5572270 Query 475755 CATCATAT-TTTAATGGTAAAAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTG 475811 || | | ||||| || || || || || ||| | | || ||||||||||| |||| Sbjct 5572269 CAAGACTTCTTTAACGGGAAGGAGCTA--TGCAAGAGCATTAACCCTGATGAAGCCGTTG 5572212 Query 475812 CATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATA 475871 | ||||||||||| || || || ||||| | | ||| || | ||| || | | Sbjct 5572211 CTTATGGAGCTGCGGTTCAGGCTGCTATCCTGACTGGTGAAGGAAGCGACAAGGTTCAAG 5572152 Query 475872 ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTA 475931 || | | ||| |||| || | || || | || |||| |||| || ||| | | Sbjct 5572151 ATCTCTTGCTTCTTGATGTTGCACCGCTAAGCCTTGGAATTGAGACAGCAGGTGGGGTGA 5572092 Query 475932 TGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCA 475991 ||||| | ||| || || || | | || || || || |||| || |||| Sbjct 5572091 TGACTGTGTTAATTCCGAGGAACACCACGGTTCCTTGTAAGAAGGAGCAAGTGTTCTCCA 5572032 Query 475992 CTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCA 476051 | ||||| || ||||| || || |||||| |||||||||| ||| | | | Sbjct 5572031 CGTATTCGGACAATCAGCCAGGCGTTCTGATCCAAGTCTTTGAAGGGGAACGGGCAAGGA 5571972 Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111 | ||||| || ||| ||||| || ||| | || | || ||||||||||| || | | Sbjct 5571971 CCAAAGACAACAACCTTCTTGGTACCTTTGAGCTCAAGGGCATTCCTCCTGCCCCACGTG 5571912 Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAA 476163 ||||||||||||| | ||| ||||| || ||||||||||| | |||||| Sbjct 5571911 GAGTTCCTCAAATCAATGTTTGCTTTGACATCGATGCAAATGGGA-TCTTAA 5571861 Score = 104 bits (114), Expect = 2e-16 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 || || |||||||| ||||| || |||||| | || ||||| | || |||| Sbjct 19037203 AGTCGAAGTACAAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCTGAAAGCGTTCGA 19037144 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 |||||| || ||||| || ||||| || || | ||||| || || | || |||||| Sbjct 19037143 CCATCTTCGAGCTGCTTGCCTGCAAATATGAGTCTCTGTTGGTCTGGTTGGATCCCTTCC 19037084 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGT 480733 |||||||||||||| ||| ||| ||||| || || | | | | ||| ||||| Sbjct 19037083 TTGTCTTGAATCTTAGCTTTAACATTGTCAATGGTGTCTGAACTCTCGA-CTTCTAGGGT 19037025 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| ||||||||||| || ||||| ||||| || || Sbjct 19037024 AATGGTTTTACCGGTAAGGGTCTTGACGAATATCTG 19036989 Score = 102 bits (112), Expect = 5e-16 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 480561 AGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCT 480620 || || |||||||| || ||||| | || |||||||| ||||| | ||| Sbjct 19037653 AGCACGAGATGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTGCGACCATCC 19037594 Query 480621 TCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCT 480680 ||||| || |||||||||||||| || | |||||| || || | ||| |||||||||||| Sbjct 19037593 TCAAGCTGTTTTCCAGCAAAAATGAGTCTTTGTTGGTCTGGTGCAATCCCTTCCTTGTCT 19037534 Query 480681 TGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAATAGT 480739 || ||||| || || ||||| || |||| | | | || || ||| || ||||| Sbjct 19037533 TGGATCTTGGCCTTCACGTTATCAATTGTGTCAGAGCTCTCAACTTCCAA-AGTTATAGT 19037475 Query 480740 TTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || ||||| || ||||| || Sbjct 19037474 CTTTCCAGTAAGGGTCTTTACAAAAATCTG 19037445 Score = 95.1 bits (104), Expect = 8e-14 Identities = 157/222 (71%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 ||||||||| || ||||| ||||| || ||| ||| || || ||||| || ||| Sbjct 19037891 ACGAAGACGCAGCACAAGGTGAAGGGTTGACTCCTTTTGGATG--TTGTAATCTGCAAGA 19037834 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | ||| ||||| || || ||||| || || || | |||||| || || | || Sbjct 19037833 GTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTTTGTTGGTCTGGTGCGATC 19037774 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTC 480727 |||||||||||||| |||||| || ||| ||||| || || | | | | || || | Sbjct 19037773 CCTTCCTTGTCTTGGATCTTTGCCTTTACATTGTCAATTGTGTCCGAGCTCTCAACTTCC 19037714 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| || ||||| || ||||| || Sbjct 19037713 AA-AGTTATTGTCTTTCCGGTAAGGGTCTTTACAAAAATCTG 19037673 Score = 89.7 bits (98), Expect = 3e-12 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 474750 TTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAG 474809 || |||| |||||||||||| | || | ||||| || || ||||| ||| |||||||| Sbjct 3000101 TTGCAGCGTATTTTAATGATGCGCAGAGGCAAGCCACAAAGGATGCTGGAGCAATTGCAG 3000042 Query 474810 GTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869 | ||||| || | ||||| || ||||| ||||||| || || | ||||||||| | | Sbjct 3000041 GACTTAACGTGGTTCGTATAATCAATGAGCCAACAGGTGCAGCCATAGCTTATGGTTTAG 2999982 Query 474870 ATAAGAA 474876 | || || Sbjct 2999981 ACAAAAA 2999975 Score = 87.8 bits (96), Expect = 1e-11 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 475907 GGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCA 475966 ||| ||||||| | ||||| | ||||| ||| ||||| || || || | |||||| Sbjct 2999235 GGTATTGAAACTATCGGAGGCGTGATGACAAATATTATTCCGAGGAACACGGCAATCCCA 2999176 Query 475967 TGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAA 476026 | || || | ||||| | ||||| ||| | ||||| ||||| |||||| || Sbjct 2999175 ACGACGAAGTCTCAGGTATTCACTACTTACCAAGATCAGCAAACTACTGTGACCATCAAA 2999116 Query 476027 ATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTT 476086 ||| |||||| || |||| | ||||||||||| | | || |||| ||| |||| Sbjct 2999115 GTCTATGAAGGCGAGAGAAGCATGACTAAAGATAACCGCGAGCTCGGAAATTTCGATCTC 2999056 Query 476087 GAAGGTATTCCTCCTGCTCCCAG 476109 || |||| |||||| ||||| Sbjct 2999055 ACCGGCATTCTTCCTGCACCCAG 2999033 >seq3 Length=15040190 Score = 172 bits (190), Expect = 4e-37 Identities = 541/818 (66%), Gaps = 30/818 (4%) Strand=Plus/Minus Query 475364 GCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCAT 475421 || || |||||||| | |||||||||||||| ||||| || || ||| | || | || Sbjct 2932667 GCCACTGCTGGAGACACTCATCTTGGTGGTGAGGATTTCGACAACAGAATGGTCAACCAC 2932608 Query 475422 GGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTG-----CTAA 475476 | ||| |||| |||||||| || || || || || || | | | | Sbjct 2932607 --TTTGTCCAAGAGTTCAAGAGAAAGAACAAGAAGGA-----CATCAGCGGTAACCCGAG 2932555 Query 475477 AGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTAC 475536 |||| |||| | || ||||| || || || | || ||| | |||| || ||| || | Sbjct 2932554 AGCACTAAGGAGGCTGAGAACCGCCTGCGAGAGAGCGAAGAGGACTCTCTCCTCTACTGC 2932495 Query 475537 TCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGA-TTATAATACTCTTATTA 475595 ||| ||||| ||||| | || || | ||||| || | || || || | ||| || | Sbjct 2932494 TCAGACTACCATTGAAATCGACTCATTGTTTGATGGTGTCGACTTCTACT-CTCCAATCA 2932436 Query 475596 CAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTG 475655 | | || | ||| || || || ||||| || ||||| || || || || | Sbjct 2932435 CCCGTGCCAGATTCGAGGAGCTTAACATGGATCTTTTCAGAAAGTGTATGGAGCCTGTCG 2932376 Query 475656 AACAAGT-TCTCAGAGATTCTAAACTTGACAA-ATCACAAGTCCATGAAATTGTTCTTGT 475713 | |||| ||| | ||| |||| | ||||| | | | ||| |||| |||| ||||| Sbjct 2932375 AG-AAGTGTCTTCGTGATGCTAAGATGGACAAGAACTCT-GTCGATGATGTTGTCCTTGT 2932318 Query 475714 AGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAA 475773 || || || || | || || || | | || |||| | | || ||||| || Sbjct 2932317 TGGGGGCTCTACCCGTATCCCCAAGGTCCAACAATTGCTCCTAGATTTCTTCAATGGCAA 2932258 Query 475774 AAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAA 475831 || | || || | | || || ||||| ||||||||||| || || |||||||| Sbjct 2932257 GGAGCTT--TGCAAATCCATCAACCCCGATGAGGCTGTTGCATACGGTGCAGCTGTCCAG 2932200 Query 475832 GCAGCTATT-TTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTT-GACG 475889 ||||||||| ||| | ||| | ||||||| | | || | | |||| | || | Sbjct 2932199 GCAGCTATTCTTAGC-GGTGAGGGTAACGAGAAGGTTCAAGATCTCCT-CTTGCTCGATG 2932142 Query 475890 TAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTT-ATTGAC 475948 | || |||||||| | ||||||||||||| |||||| | |||||| |||| || | Sbjct 2932141 TCACACCACTTTCTCTCGGTCTTGAAACAGCTGGAGGAGTCATGACT-GTCTTGATCCAG 2932083 Query 475949 AGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAA 476008 |||||||| | ||||| || ||| | |||| || || |||||||| || || || Sbjct 2932082 AGAAATACAACCATCCCCACAAAGAAAGAACAAGTCTTCTCTACTTATTCAGACAACCAG 2932023 Query 476009 ACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAA 476068 | ||| |||||| |||||||||| |||||| | || || || || ||| Sbjct 2932022 CCCGGTGTCTTGATCCAAGTCTTTGAAGGCGAAAGAGCAAGAACCAAGGACAACAACCTT 2931963 Query 476069 CTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAA 476128 | || | || | ||| ||||| ||||| ||||| ||||| ||||||||||| Sbjct 2931962 TTGGGTAAATTCGAGCTTTCTGGTATCCCTCCAGCTCCAAGAGGTGTTCCTCAAATCACT 2931903 Query 476129 GTTACTTTTGATATTGATGCAAATGGTATTCTTAATGT 476166 || ||| || |||||||| || ||||| || || || Sbjct 2931902 GTCTGTTTCGACATTGATGCGAACGGTATCCTCAACGT 2931865 Score = 161 bits (178), Expect = 6e-34 Identities = 531/811 (65%), Gaps = 16/811 (2%) Strand=Plus/Minus Query 475364 GCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCAT 475421 || || ||||| || | |||||||||||||| || ||||| || ||| | || | ||| Sbjct 4087572 GCCACCGCTGGTGACACGCATCTTGGTGGTGAGGACTTTGACAACAGAATGGTTAACCAT 4087513 Query 475422 GGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTAAAGCAT 475481 | |||| | || || |||||||| || || ||| || | | | | || | Sbjct 4087512 --TTTGTTCAGGAGTTTAAGAGGAAGAACAAGAAGGATATTACTGGCAATCCGAGGGCTT 4087455 Query 475482 TAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAA 475541 | || || ||||| || |||||||| || || ||| | |||| ||||| || |||||| Sbjct 4087454 TGAGGCGGCTTAGGACAGCTTGTGAGCGGGCCAAGAGGACTCTCTCTTCGACTGCTCAAA 4087395 Query 475542 CTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGG 475601 | ||| ||||| | || ||||| | || || ||||||| | || || || | | Sbjct 4087394 CGACTATTGAAATCGACTCTCTCTACGAGGGTATTGATTTCTACACAACCATCACCCGTG 4087335 Query 475602 CTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAG 475661 ||| ||| || || | || | || || || || ||||| || || ||| Sbjct 4087334 CTAGATTCGAGGAGCTCAACATGGACTTGTTCAGGAAGTGTATGGAACCAGTGGAG-AAG 4087276 Query 475662 T-TCTCAGAGATTCTAAACTTGACAAATCACAA-GTCCATGAAATTGTTCTTGTAGGAGG 475719 | | | |||||| |||| | ||||| ||| ||||| || |||| ||||| || || Sbjct 4087275 TGTTTGAGAGATGCTAAGATGGACAAGA-ACAGCGTCCACGATGTTGTCCTTGTTGGTGG 4087217 Query 475720 TTCAACAAGAATTCCAAAAATAAGAGAAATGCTTT--CATCATATTTT-AATGGTAAAAA 475776 || ||||||||||| || | || | ||||| || | |||| || || ||| | Sbjct 4087216 CTCCACAAGAATTCCCAAGGTGC-AGCA--GCTTTTGCAAGACTTTTTCAACGGGAAAGA 4087160 Query 475777 GTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGC 475836 | | | |||| | || || || || |||||||| || ||||| ||||||||||| || Sbjct 4087159 GCTGTGTAAAAGCATTAACCCGGACGAGGCTGTTGCTTACGGAGCAGCTGTCCAAGCTGC 4087100 Query 475837 TATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCC 475896 || | ||| || ||||||| | | | | ||||| |||| || ||||| Sbjct 4087099 GATCCTGAGCGGTGAAGGGAACGAGAAGGTCCAAGACTTGTTACTTCTTGATGTCACTCC 4087040 Query 475897 ACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATAC 475956 || || | ||||| ||||| | || || |||||||| || ||| || || || Sbjct 4087039 TCTGTCCCTGGGTCTGGAAACCGCCGGTGGAGTTATGACTGTCCTGATTCCAAGGAACAC 4086980 Query 475957 TCCTATCCCATGCAAAAAATCAAAAG-TATTTTCCACTTATTCTGATAATCAAACAACTG 476015 | || || |||| || | || |||| || || ||||| || || || | || Sbjct 4086979 AACCATTCC-GACAAAGAAAGAGCAGATATTCTCTACCTATTCAGACAACCAGCCGGGTG 4086921 Query 476016 TAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAA 476075 || ||||| ||| ||||| || ||| | || || || || ||| | |||| Sbjct 4086920 TACTGATCCAGGTCTACGAAGGGGAGAGAGCAAGGACAAAGGACAACAACCTTTTGGGAA 4086861 Query 476076 CTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTT 476135 || | || ||||| || |||||||| |||| ||||| |||||| || || Sbjct 4086860 AGTTCGAGCTCAGCGGTATACCACCTGCTCCACGAGGTGTTCCCCAAATTACGGTATGTT 4086801 Query 476136 TTGATATTGATGCAAATGGTATTCTTAATGT 476166 | || || || || |||||||| || ||||| Sbjct 4086800 TCGACATCGACGCCAATGGTATCCTGAATGT 4086770 Score = 93.3 bits (102), Expect = 3e-13 Identities = 132/184 (72%), Gaps = 10/184 (5%) Strand=Plus/Minus Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 |||| || || || ||||| || |||||||| ||||| || || || || || ||| | Sbjct 4087808 TTACCGTGCCTGCTTATTTCAACGATTCTCAGCGTCAGGCGACCAAGGACGCTGGAGTTA 4087749 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 | | ||||| ||||| | ||||| || ||||| || || || || || ||||||||| Sbjct 4087748 TCTCTGGTCTCAATGTGATGCGTATCATCAATGAGCCTACTGCTGCTGCCATTGCTTATG 4087689 Query 474864 GTCTTGATAAGAA------TTCTGAC--AAAGAAGTAAATGTTTTAATCTTTGATTGTGG 474915 ||||||| ||||| | || | ||||| |||||| | |||||||||| || Sbjct 4087688 GTCTTGACAAGAAGGCGTCTAGTGTCGGCGAGAAG--AATGTTCTTATCTTTGATTTGGG 4087631 Query 474916 AGGT 474919 |||| Sbjct 4087630 AGGT 4087627 Score = 93.3 bits (102), Expect = 3e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| || ||||||||| |||| | |||||||| |||||||| || |||||| Sbjct 11068453 ACTGTTCCAGCTTACTTTAATGATGCTCAGAGACAAGCAACAAAAGATGCCGGGAGAATT 11068512 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 || |||||| |||| | || || |||||||| || || || || || | ||||| Sbjct 11068513 GCTGGTCTTGATGTCGAGAGAATCATAAATGAACCGACGGCTGCTGCTCTGTCCTATGG 11068571 Score = 87.8 bits (96), Expect = 1e-11 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 ||||||| || || || || || || ||||| || || ||||| || ||||| || | Sbjct 2932903 TTACTGTCCCTGCTTACTTCAACGACTCTCAGCGCCAGGCAACAAAGGATGCTGGTGTCA 2932844 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 |||| ||| | ||||| | ||||| || || || || || || || || ||||||||| Sbjct 2932843 TTGCTGGTTTGAATGTCATGCGTATCATCAACGAGCCTACTGCTGCTGCTATTGCTTATG 2932784 Query 474864 GTCTTGATAAGAA 474876 ||||||| ||||| Sbjct 2932783 GTCTTGACAAGAA 2932771 >seq6 Length=16577294 Score = 170 bits (188), Expect = 1e-36 Identities = 555/844 (66%), Gaps = 20/844 (2%) Strand=Plus/Minus Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399 ||||| ||| | ||| || | || || ||||||||| | |||||||||||||| ||| Sbjct 490473 GAAGAAGGTATCTTCGAGGTCAAGGCTACTGCTGGAGATACTCATCTTGGTGGTGAGGAT 490414 Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAA--AGT 475455 || ||||| || | || | || | |||| |||| || |||||||| || || || Sbjct 490413 TTCGATAACAGGATGGTTAACCAC--TTTGTTCAAGAGTTTAAGAGGAAGAACAAGCAGG 490356 Query 475456 TGATCTTTCAACATCTGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAA 475515 ||| | | | |||| ||| |||| | | ||||| ||||| || | || || Sbjct 490355 ACATCAC-CGGTAAC-GCTAGAGCTCTAAGGAGGATGAGAACAGCTTGCGAGAGAGCAAA 490298 Query 475516 GCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAAT 475575 | || |||||||||| | | ||||| || | || |||| ||||| | |||| | Sbjct 490297 GAGAACTCTTTCTTCCACCGCACAAACGACCATCGAGATTGACTCTCTGGCAGGAGGATT 490238 Query 475576 TGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAG 475635 ||| | || ||| ||||| | |||| ||| ||||| || ||||| || || Sbjct 490237 TGACTTCTATGCTCCAATTACCCGTGCTAGATTCGAAGAGCTTAACATGGATCTTTTCAG 490178 Query 475636 AAAAACAATTGAACCCGTTGAACAAGT-TCTCAGAGATTCTAAACTTGACAA-ATCACAA 475693 || || || || ||||| |||| |||| | ||| |||| | ||||| | | | Sbjct 490177 GAAGTGTATGGAGCCTGTTGAG-AAGTGTCTCCGTGATGCTAAGATGGACAAGAACTCG- 490120 Query 475694 GTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTT 475753 || ||||| |||| ||||| || ||||| || | || || ||| | | | | || Sbjct 490119 GTACATGAGGTTGTCCTTGTCGGTGGTTCTACCCGTATCCCCAAAGTTCAACAGCTTCTC 490060 Query 475754 TCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTT 475810 || || | || ||||| || || | || |||| || || |||||||| |||||| Sbjct 490059 -CAAGATTTCTTCAATGGCAAGGAGCTC--TGCAAGTCTATCAACCCTGATGAGGCTGTT 490003 Query 475811 GCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAAT 475870 ||||| || || ||||| || || || ||| || ||| || | |||| || | | Sbjct 490002 GCATACGGTGCAGCTGTTCAGGCTGCAATTCTAAGCGGTGAAGGAAACGAAAAGGTTCAA 489943 Query 475871 AATATTGTACTTG-TTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGAT 475929 | || | |||| |||| || || || || || | |||||||| || | ||| || | Sbjct 489942 GACCTTCT-CTTGCTTGATGTCACCCCTCTCTCCCTCGGTCTTGAGACTGCTGGTGGTGT 489884 Query 475930 TATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTC 475989 ||||| | | | ||| | ||||| || | ||||| ||| || | || || || Sbjct 489883 CATGACCACTTTGATTCAGAGAAACACAACAATCCCCACCAAGAAGGAGCAGGTCTTCTC 489824 Query 475990 CACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATT 476049 |||||| || || || || | || |||||| ||| |||||||||||| Sbjct 489823 CACTTACTCGGACAACCAGCCTGGCGTGTTGATCCAAGTCTACGAAGGTGAAAGAGCCAG 489764 Query 476050 CACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAG 476109 || || || || ||| || || | ||| | || || || ||||| ||||| | Sbjct 489763 AACCAAGGACAACAACCTTCTCGGTAAGTTTGAGCTCTCCGGAATCCCTCCAGCTCCTCG 489704 Query 476110 AGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTAC 476169 || || ||||| || ||| ||||| |||||||| || ||||| || || ||| | Sbjct 489703 TGGTGTCCCTCAGATCACAGTCTGCTTTGACATTGATGCCAACGGTATCCTCAACGTTTC 489644 Query 476170 TGCT 476173 |||| Sbjct 489643 TGCT 489640 Score = 127 bits (140), Expect = 1e-23 Identities = 533/825 (65%), Gaps = 30/825 (4%) Strand=Plus/Minus Query 475364 GCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCAT 475421 ||||||||||| || | ||||||||||| |||||||| || || ||| | || | || Sbjct 494203 GCAACAGCTGGTGACACCCATCTTGGTGGGGAAGATTTCGACAACAGAATGGTCAACCAC 494144 Query 475422 GGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTAAAGCA- 475480 | || |||| ||||||||||| | || || || || ||| ||| || Sbjct 494143 --TTCGTCCAAGAGTTCAAGAGGAAGAGCAAGAAGGA-----CATCA-CTGGTAACCCAA 494092 Query 475481 ------TTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCT 475534 ||| || || | |||||||| ||||| | || ||| | ||||||| || || Sbjct 494091 GAGCTCTTAGGAGGT-TGAGAACTGCCTGTGAGAGAGCAAAGAGGACTCTTTCCTCCACT 494033 Query 475535 ACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGA-TTATAATACTCTTAT 475593 |||| || || | || |||| ||||| | || || ||||| || || | | | || Sbjct 494032 GCTCAGACCACCATCGAGATTGACTCTCTATACGAGGGTATTGACTTCTACTCCACC-AT 493974 Query 475594 TACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGT 475653 || | |||| |||||| || || ||||||||||| || || || || || Sbjct 493973 CACCCGTGCTAGATTTGAGGAGCTTAACATGGATCTCTTTAGGAAGTGTATGGAGCCAGT 493914 Query 475654 TGAACAAGT-TCTCAGAGATTCTAAACTTGACAA-ATCACAAGTCCATGAAATTGTTCTT 475711 ||| |||| |||| | ||| |||| | ||||| | ||| || || || | || ||| Sbjct 493913 TGAG-AAGTGTCTCCGTGATGCTAAGATGGACAAGAGCACT-GTTCACGATGTCGTCCTT 493856 Query 475712 GTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGG 475770 || || ||||| || | || || || | || ||||| || | | || || || Sbjct 493855 GTTGGTGGTTCCACCCGTATCCCTAAGGTTCAGCAATTGCTT-CAGGACTTCTTCAACGG 493797 Query 475771 TAAAAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTC 475828 ||| || | || |||| || || || ||||| |||||||||||||| ||||| ||| Sbjct 493796 CAAAGAGCTT--TGCAAGTCTATAAACCCCGATGAGGCTGTTGCATATGGTGCTGCCGTC 493739 Query 475829 CAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGAC 475888 || | ||||||| | ||| || | ||||||| | | || || | | | || Sbjct 493738 CAGGGAGCTATTCTCAGTGGTGAAGGAAACGAGAAGGTTCAAGATCTTCTGTTGCTCGAT 493679 Query 475889 GTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGAC 475948 || ||||| || || | ||| | ||||| | || || | ||||| | | | || Sbjct 493678 GTCACTCCTCTCTCCCTTGGTTTGGAAACTGCCGGTGGTGTCATGACCACTTTGATCCCA 493619 Query 475949 AGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAA 476008 ||||| || | |||||| ||| || | || || || || || || || || || Sbjct 493618 AGAAACACAACAATCCCAACCAAGAAGGAGCAGGTCTTCTCTACCTACTCAGACAACCAG 493559 Query 476009 ACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAA 476068 | ||| ||||| | | ||||| |||||| || || || || ||| Sbjct 493558 CCTGGTGTGTTGATCCAGGTGTACGAAGGAGAAAGAGCCAGAACCAAGGACAACAACCTT 493499 Query 476069 CTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAA 476128 || || | ||| | || || || || || ||||| | || || ||||| || | Sbjct 493498 CTCGGTAAATTTGAGCTCTCCGGAATCCCACCGGCTCCACGTGGTGTGCCTCAGATCACA 493439 Query 476129 GTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCT 476173 || ||||| ||||| || |||||||| || || ||| ||||| Sbjct 493438 GTGTGCTTTGACATTGACGCCAATGGTATCCTCAACGTTTCTGCT 493394 Score = 104 bits (114), Expect = 2e-16 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 ||||| || || | |||||| || ||||| | || || |||||||| || | | Sbjct 735346 AGACGAAGCACCAAATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCTAGTGTACGG 735405 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||| || || ||||| || ||||| ||||| | ||||| || ||||| || |||||| Sbjct 735406 CCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGGATACCTTCC 735465 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGT 480733 ||||| || |||||| ||||| || ||||| |||| | | | || || ||||| Sbjct 735466 TTGTCCTGGATCTTTGCCTTGACGTTGTCGATAGTGTCAGAGCTCTCAA-CCTCGAGGGT 735524 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || |||||||||||||| || || || || Sbjct 735525 GATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTG 735560 Score = 102 bits (112), Expect = 5e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || | ||| ||||||||||||||| || || | ||||| ||||| | ||| Sbjct 2563071 ACGGAGCCTGAGAACAAGATGAAGTGTAGACTCCTTCTGGATGTTATAGTCAGCCAAAGT 2563130 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| |||||||||||||||||||| || || | | || || || || || ||||| Sbjct 2563131 CCTGCCGTCTTCAAGTTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGTGGGATTCC 2563190 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||| |||||||| || ||||||| || || || |||| | | | | | ||| Sbjct 2563191 CTCCTTATCTTGAATTTTAGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCACCTCCAA 2563250 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||| || || || || || || ||||| || || Sbjct 2563251 -AGTAATAGTCTTTCCAGTAAGGGTTTTGACGAAGATCTG 2563289 Score = 98.7 bits (108), Expect = 6e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| | ||| || | || || || ||| || || || || ||||| | || Sbjct 2563527 ACGAAGCCTGAGGACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCCAAGGT 2563586 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | |||||| || |||||||| ||||| ||||| | ||| ||||| ||||| || || Sbjct 2563587 ACGGCCATCTTCGAGCTGCTTTCCGGCAAAGATAAGCCTTTGCTGATCCGGAGGGATACC 2563646 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||| || ||||| || || || || || |||| | | || || Sbjct 2563647 TTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATTGTGTCAGAGCTTTCCACCTCGAG 2563706 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| ||||| || ||||||||||||||||| || || || Sbjct 2563707 GGTGATAGTCTTCCCGGTGAGAGTCTTAACAAAGATCTG 2563745 Score = 91.5 bits (100), Expect = 1e-12 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || |||||||| | || | ||| || || ||||| || ||||| ||||| | || Sbjct 6990474 TTGTAATCAGCCAAGGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGC 6990533 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 ||||| || || ||||| || || ||||| ||||| ||||||| ||||| ||||| Sbjct 6990534 TGATCCGGTGGGATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATGGTATCT 6990593 Query 480714 GTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | || | | ||||| || |||||||| ||||||||||| || || || || Sbjct 6990594 GAGCTCTCAACCT-CTAGGGTGATTGTTTTACCAGTGAGAGTCTTCACAAAGATCTG 6990649 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || ||||| || ||| ||||| | || |||||||| || || Sbjct 6990203 ACGGAGACGAAGCACGAGATGCAGGGTAGACTCTTTTTGGATGTTGTAATCAGCGAGGGT 6990262 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||||| || || || ||||| || || | || || || || || || || Sbjct 6990263 ACGTCCGTCTTCAAGCTGTTTCCCGGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCC 6990322 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||||||||||||||||| ||||| || || || || | | | | || | ||| Sbjct 6990323 TTCCTTGTCTTGAATCTTTGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAA 6990382 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || ||||| || ||||| || ||||| || Sbjct 6990383 -AGTGATAGTCTTGCCGGTTAGGGTCTTTACAAAAATCTG 6990421 Score = 86.0 bits (94), Expect = 4e-11 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 || ||||| || | |||||| || ||||| | || ||||| || | || | | Sbjct 8339194 AGCCGGAGAACCAAATGAAGGGTTGACTCTTTCTGGATGTTGTAATCTGCCAAGGTACGG 8339135 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 |||||| || || || ||||| || || | | ||| ||||| |||||||| |||||| Sbjct 8339134 CCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTTTGCTGATCCGGAGGAATGCCTTCC 8339075 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGT 480733 ||||| || ||||| || ||| ||||| || |||| | | | || || || || Sbjct 8339074 TTGTCCTGGATCTTCGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAA-CCTCGAGAGT 8339016 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || ||||| || || ||||||||||| Sbjct 8339015 GATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTG 8338980 >seq7 Length=17303919 Score = 123 bits (136), Expect = 2e-22 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || || | ||| || || || || | || ||||| || || || Sbjct 14231654 ACGAAGACGAAGAACCAAATGCAGAGTTGACTCCTTCTGGATGTTGTAATCCGCAAGTGT 14231713 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || |||||||| || ||||| ||||| |||||||| || ||||| || || Sbjct 14231714 CCGACCATCCTCGAGTTGCTTGCCCGCAAAGATAAGTCGTTGTTGGTCCGGAGGGATCCC 14231773 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||||||| ||||| ||||||| ||||| || |||| | | | || ||| | Sbjct 14231774 TTCCTTGTCTTGGATCTTGGCTTTGACATTGTCAATGGTGTCAGAGCTCTCAA-CTTCTA 14231832 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||| ||||| ||||||||||| || || || ||||| Sbjct 14231833 GAGTAATGGTTTTGCCGGTGAGAGTTTTCACAAATATTTG 14231872 Score = 107 bits (118), Expect = 1e-17 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 || || |||||| | || || |||||| |||||| | ||||| | |||||| | || Sbjct 15184369 ATAGGGATTGATCTTGGTACAACTTACTCTTGTGTTGGTGTTTACAAGAATGGTCACGTT 15184428 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| |||||||| |||||||| || | | || || || | ||| ||||||||| Sbjct 15184429 GAAATTATTGCCAACGACCAAGGAAACCGTATTACTCCTTCCTGGGTTGGTTTTACTGAC 15184488 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 |||| || ||||| || |||||||| |||| || || ||| |||| | ||| Sbjct 15184489 TCTGAGAGGCTCATTGGTGAGGCTGCTAAGAATCAGGCGGCTGTTAACCCTGAGAGGACT 15184548 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAA 474543 || || || | || ||||||||||| || || Sbjct 15184549 ATCTTCGACGTCAAGAGATTGATTGGGCGAAA 15184580 Score = 102 bits (112), Expect = 5e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || || || |||||||| || || | || ||||| ||||| || Sbjct 14231426 ACGAAGACGCAGCACTAGGTGAAGTGTTGACTCCTTCTGGATGTTGTAATCCGCTAGGGT 14231485 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || | ||| || |||||||| ||||| || ||||| | || || || || | || || Sbjct 14231486 TCGGCCATCCTCGAGTTGCTTGCCAGCGAAGATAAGTCTCTGCTGGTCTGGTAGGATCCC 14231545 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| ||||| |||||| || || || || | | | | || || Sbjct 14231546 TTCCTTGTCTTGGATCTTGGCCTTGACATTGTCTATTGTGTCTGAGCTTTCAACCTCCAG 14231605 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||| ||||| || ||||| ||||| ||||| Sbjct 14231606 TGTTATGGTTTTTCCGGTAAGGGTCTTGACGAATATTTG 14231644 Score = 100 bits (110), Expect = 2e-15 Identities = 148/206 (72%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||| |||||||| || || || ||| |||||||| || |||| ||| || | Sbjct 14232353 CAAG-TGAAGTGTTGACTCCTTCTGAATATTGTAATCAGCAAGGGTTCGACCATCCTCGA 14232411 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 ||||||| || ||| ||||| | ||| || || || | |||||| |||||||||| | Sbjct 14232412 GTTGCTTGCCCGCATGGATAAGTCTTTGCTGGTCCGGTAGGATTCCTACCTTGTCTTGGA 14232471 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAATAGTTTTA 480743 |||| |||||| ||||| || |||| | | | || || | || |||| ||||| Sbjct 14232472 TCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACTT-CTAGAATAATGGTTTTG 14232530 Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||||||| || || || ||||| Sbjct 14232531 CCGGTGAGAGTTTTCACAAATATTTG 14232556 Score = 100 bits (110), Expect = 2e-15 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||||||||||||||| || ||||| ||||| | || || || |||| ||| |||||||| Sbjct 14232632 ATCTTCAAGTTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCCGGAGTAATACCTTCCTT 14232691 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||||| ||||| |||||| ||||| || |||| | | | ||||| || || Sbjct 14232692 ATCTTGGATCTTAGCCTTGACATTGTCAATCGTGTCAGAGCTTTCAACCTCAAGAGTTAT 14232751 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||| ||||||||||| || || || Sbjct 14232752 GGTCTTCCCGGTAAGAGTCTTAACAAAGATCTG 14232784 Score = 98.7 bits (108), Expect = 6e-15 Identities = 194/287 (68%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 475874 ATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATG 475933 ||||| ||| |||| || || |||||||| | ||| | || || | ||||| ||||| Sbjct 6236191 ATTGTGCTTCTTGATGTGACACCACTTTCTATTGGTTTGGAGACCCTGGGAGGTGTTATG 6236132 Query 475934 ACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACT 475993 || || | ||| || || ||| | | || ||||||| |||| ||||| ||| Sbjct 6236131 ACCAAGATCATTCCGAGGAACACTACACTACCTACTTCAAAATCAGAAGTCTTTTCGACT 6236072 Query 475994 TATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACT 476053 | ||||| || |||| ||| || | | | | ||||| || | || | Sbjct 6236071 GCTGCTGATGGGCAGACAAGTGTTGAGATTAATGTGCTGCAGGGTGAGAGGGAGTTTGTT 6236012 Query 476054 AAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGA 476113 | ||||| || ||||| | || ||| || |||||||| ||||| || | ||| Sbjct 6236011 AGGGATAACAAGTCTCTTGGCAGCTTCCGTCTAGATGGTATTCCACCTGCACCACGTGGA 6235952 Query 476114 GTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCT 476160 ||||| ||||||||||| | ||||| |||||||| ||||| ||||| Sbjct 6235951 GTTCCACAAATTGAAGTCAAATTTGACATTGATGCCAATGGAATTCT 6235905 Score = 95.1 bits (104), Expect = 8e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 290827 ACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGC 290886 |||||||| || || ||| ||||| ||||| || || || || ||||||||||| || Sbjct 796323 ACCATATGATAGTGCAGCAGCTGTAGGTTCGTTGATGATCCTCTGGACATCAAGACCAGC 796264 Query 290887 AATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGT 290946 |||||| | | ||| || || || || || |||||||| |||||||| || || || Sbjct 796263 AATTTTCCCAGCATCCTTTGTGGCTTGTCGCTGAGCATCATTGAAATAAGCTGGAACGGT 796204 Query 290947 AATAACAGCTTT 290958 || ||||||||| Sbjct 796203 AACAACAGCTTT 796192 Score = 95.1 bits (104), Expect = 8e-14 Identities = 131/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| ||||| || | ||| | | ||| ||||||||||| || ||| | ||||| | Sbjct 14232149 AATATTGTAATCCGCCAAAGTACGGCCATCCTCAAGTTGCTTCCCCGCATAGATAAGTCT 14232208 Query 480650 TTGTTGAT-CAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAG 480708 || || | ||| ||| ||||||||||||||||| ||||| |||||| ||||| | Sbjct 14232209 CTGCTGGTCCAGTAGG-ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATGG 14232267 Query 480709 TATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTT 480768 | || | | | | |||||| | || || || || || ||||||||||| || |||| Sbjct 14232268 TGTCGGAGCTTTCAACTTCAAGAATTATGGTCTTGCCAGTTAGAGTCTTAACAAAGATTT 14232327 Query 480769 G 480769 | Sbjct 14232328 G 14232328 Score = 91.5 bits (100), Expect = 1e-12 Identities = 191/282 (68%), Gaps = 2/282 (1%) Strand=Plus/Plus Query 475763 TTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCT 475822 ||| | |||||| || ||| | |||| || || || || |||||||| ||||| ||| Sbjct 15185715 TTTGAAGGTAAAGAGCCAAACAAGGGTGTGAACCCCGACGAGGCTGTTGCTTATGGTGCT 15185774 Query 475823 GCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGA-GAAACTAAATAATATTGTACT 475881 ||||| || | | |||||| || || | || || || ||| | |||| | || Sbjct 15185775 GCTGTTCAGGGTGGTATTTTGAGCGGAGAAGGCGGTGATGAGACCAAAGA-TATTCTTCT 15185833 Query 475882 TGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCT 475941 | |||| || | ||||| | || ||| |||| || || ||||| | ||||| || || Sbjct 15185834 TCTTGATGTGGCACCACTCACTTTGGGTATTGAGACTGTAGGAGGAGTGATGACAAAGCT 15185893 Query 475942 TATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGA 476001 || ||||| || ||| ||| ||| ||||| | || || | || || || Sbjct 15185894 GATCCCAAGAAACACGGTTATTCCAACCAAGAAATCTCAGGTTTTCACAACGTACCAAGA 15185953 Query 476002 TAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAG 476043 | || |||||||| | ||||| |||||||||||||||| Sbjct 15185954 CCAGCAGACAACTGTCTCAATCCAGGTCTTTGAAGGTGAAAG 15185995 Score = 87.8 bits (96), Expect = 1e-11 Identities = 122/172 (71%), Gaps = 12/172 (7%) Strand=Plus/Minus Query 321743 TTCAATATTATGTTCCGTAACAATTTCATCAAATGTAAGATTTTTTGCAATAATTAATGG 321802 ||||||||||| | ||||| |||| |||| ||||| |||||| | |||| Sbjct 1673118 TTCAATATTATATGGAGTAACTGTTTCTGGGTATGTGAGATTCAGAGCAATACTCCATGG 1673059 Query 321803 TAAACCAACTTCATTCAGTGCAATATTT------GGATCAGATGTGATAACTGTACGACC 321856 || ||||| ||||| |||||||| ||||| | ||| ||||| ||||| | Sbjct 1673058 TACACCAAGTTCAT------CAATATTTATTGTAGGATCTGGTGTAATAACAGTACGTGC 1673005 Query 321857 AGACATATCAACACGTTTACCCATAAGATTTCCTCTAATACGACCTTCTTTT 321908 || | |||||||||||| ||||| | |||||||| || | |||||| ||| Sbjct 1673004 TGAAAAATCAACACGTTTTCCCATCAAGTTTCCTCTGATTCTACCTTCCTTT 1672953 Score = 86.0 bits (94), Expect = 4e-11 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || ||||| ||||| ||| ||||| | ||| ||||| || || ||| Sbjct 14231199 CGGAGACGAAGAACAAGGTGAAGAGTAGACTCTTTCTGGATATTGTAATCTGCAAGTGTT 14231258 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | |||||| ||||| || || ||||| || || | || || || || | || ||| Sbjct 14231259 CGACCATCTTCGAGTTGTTTACCGGCAAAGATTAGTCTCTGCTGGTCCGGTGTGATCCCT 14231318 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAG 480730 || |||||||||||||| || || ||||| ||||||| | | | | || || Sbjct 14231319 TCTTTGTCTTGAATCTTGGCCTTCACGTTATCAATCGTATCAGAGCTCTCGA-CCTCTAG 14231377 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||| || || | |||||| || ||||| || Sbjct 14231378 AGTGATGGTTTTGCCCGTCAAAGTCTTGACAAAAATCTG 14231416 >seq2 Length=14066726 Score = 109 bits (120), Expect = 4e-18 Identities = 164/229 (72%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 ||||| || |||||||| || ||| || || | || |||||||| || || | Sbjct 7053388 AGACGAAGCACAAGATGGAGAGTAGACTCCTTTTGGATGTTGTAATCAGCAAGTGTGCGA 7053447 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||| || | ||||| |||||||| ||||| | || ||||| |||||||| |||||| Sbjct 7053448 CCATCCTCTAACTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGAATCCCTTCC 7053507 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGT 480733 ||||| |||||||| ||| ||| ||||||||||||| | | | || | ||| || Sbjct 7053508 TTGTCCTGAATCTTAGCTTTAACATTGTCAATAGTATCAGAGCTCTCAACCTCCAA-AGT 7053566 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTGGA-ACGACATCTT 480781 ||| ||||| || || | ||||| || || || || | || || |||| Sbjct 7053567 AATGGTTTTTCCTGTCAACGTCTTCACAAAGATCTGCATACCACCTCTT 7053615 Score = 98.7 bits (108), Expect = 6e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 ||||| ||||||||||| || ||| || || | || |||||||| || || | Sbjct 7053160 AGACGAAGTACAAGATGGAGAGTAGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGA 7053219 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||||||||| || || |||||||| || || | ||||| || || || ||||||||| Sbjct 7053220 CCATCTTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATTCCTTCC 7053279 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGT 480733 ||||| |||||||| ||||| ||||| || || | | | | || | ||| || Sbjct 7053280 TTGTCCTGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAACCTCCAA-AGT 7053338 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| || ||||| || ||||| || Sbjct 7053339 TATGGTCTTTCCGGTAAGGGTCTTCACAAAAATCTG 7053374 Score = 86.0 bits (94), Expect = 4e-11 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| ||||| || || || ||||| || | | ||| ||||| ||||| || |||||||| Sbjct 7053678 ATCCTCAAGCTGTTTACCGGCAAAGATCAATCTTTGCTGATCCGGAGGGATCCCTTCCTT 7053737 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735 ||| ||||||||| || ||| || ||||| |||| | | | | ||||| |||| Sbjct 7053738 GTCCTGAATCTTTGCCTTAACATTGTCGATAGTGTCAGAGCTCTCTA-CCTCAAGAGTAA 7053796 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || || || ||||||||||| Sbjct 7053797 TGGTCTTGCCAGTAAGTGTTTTCACGAAAATTTG 7053830 >seq4 Length=14994381 Score = 87.8 bits (96), Expect = 1e-11 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 480564 ACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCA 480623 ||||||||||| ||| ||||| | || |||||||| | |||| | |||||| Sbjct 9871027 ACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGCCAAGGTTCGGCCATCTTCG 9870968 Query 480624 AGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGA 480683 |||||||| |||||||| || || | |||||||||||| || || || || ||||| ||| Sbjct 9870967 AGTTGCTTACCAGCAAAGATGAGCCTTTGTTGATCAGGTGGTATACCCTCTTTGTCCTGA 9870908 Query 480684 A 480684 | Sbjct 9870907 A 9870907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268146042279404