Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20rubella_20[refseq_20GCF_5F000375325.1_202013-04-23] 773 sequences; 133,063,876 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq6 140 6e-28 seq2 131 3e-25 seq1 111 3e-19 seq7 109 1e-18 seq4 107 4e-18 >seq6 Length=16577294 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| ||||| | || ||||| | || | |||||| ||| || |||||| Sbjct 6990423 ATACCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCA 6990482 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || || |||| || | || ||||| |||||||| | ||||| ||||| ||| Sbjct 6990483 GCCAAGGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGT 6990542 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| ||||||||||| || ||| ||| ||||| || | |||||| || Sbjct 6990543 GGGATTCCCTCTTTATCTTGGATCTTAGCTTTGACATTGTCAATGGTATCTGAGCTCTCA 6990602 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || ||||| || || ||||||||||| | || || | ||| |||||||| Sbjct 6990603 ACCTCTAGGGTGATTGTTTTACCAGTGAGAGTCTTCACAAAGATCTGCAT 6990652 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| | || || || | || | || || |||||| ||||| Sbjct 8339434 ATACCACCACGGAGACGAAGAACCAAGTGAAGGGTTGATTCCTTCTGGATATTGTAATCC 8339375 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | ||| || |||| || ||||||||||| |||||||| | |||||| ||||| ||| Sbjct 8339374 GCAAGTGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATAAGTCTCTGCTGATCCGGT 8339315 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| |||||||| || || ||| || ||||| |||| ||||| || Sbjct 8339314 GGGATTCCCTCTTTATCCTGGATCTTAGCCTTAACATTGTCAATAGTGTCTGAACTCTCA 8339255 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || |||||||| ||||| || || || | ||| |||||||| Sbjct 8339254 ACCTCAAGGGTGATGGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 8339205 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | || | || || || | || | ||| || ||| || |||||| Sbjct 735562 ATACCACCTCTCAACCGGAGAACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCA 735621 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || || |||| || | ||||||||||| |||||||||||||| ||||| || Sbjct 735622 GCCAAGGTACGGCCATCTTCGAGCTGTTTACCAGCGAAGATTAATCTCTGCTGATCCGGA 735681 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || || || ||||| || | ||||| || Sbjct 735682 GGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCTGAGCTCTCG 735741 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| ||||| || ||||||| |||||| | ||| || ||||| Sbjct 735742 ACCTCGAGAGTGATGGTCTTGCCAGTTAGTGTTTTCACAAAAATTTGCAT 735791 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| || || | || ||||| | || | |||||| ||| || ||||| Sbjct 8339206 ATACCACCTCTCAGCCGGAGAACCAAATGAAGGGTTGACTCTTTCTGGATGTTGTAATCT 8339147 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || || |||| || | ||||||||||| ||||| ||||| || ||||| || Sbjct 8339146 GCCAAGGTACGGCCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTTTGCTGATCCGGA 8339087 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || || || ||||| || | || || || Sbjct 8339086 GGAATGCCTTCCTTGTCCTGGATCTTCGCCTTAACATTGTCAATGGTGTCAGAGCTCTCA 8339027 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| ||||| || ||||| | |||||| | || || ||||| Sbjct 8339026 ACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 8338977 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | ||| | || ||||| | || | |||||| ||| || ||||| Sbjct 6990879 ATACCACCTCTTAAACGGAGAACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCG 6990938 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || || |||| || | |||||||| || ||||| ||||| || || || || Sbjct 6990939 GCCAAGGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGA 6990998 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || || || ||||| || | || || || Sbjct 6990999 GGAATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCG 6991058 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| ||||| |||||||| | |||||| | || || ||||| Sbjct 6991059 ACCTCAAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 6991108 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| ||||| | || ||||| | || | |||||| ||| || || ||| Sbjct 735334 ATACCACCTCTCAGACGAAGCACCAAATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCA 735393 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || ||| || |||| || | || ||||| |||||||| | |||||||| || || Sbjct 735394 GCTAGTGTACGGCCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGA 735453 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || || || || || |||| || || || Sbjct 735454 GGGATACCTTCCTTGTCCTGGATCTTTGCCTTGACGTTGTCGATAGTGTCAGAGCTCTCA 735513 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || || || | || || | ||| |||||||| Sbjct 735514 ACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 735563 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| | ||| | || | || | ||| || |||||| || ||| Sbjct 6990651 ATACCACCACGAAGACGAAGTACAAGGTGAAGGGTCGACTCCTTTTGGATATTGTAGTCA 6990710 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | | | || || | || || || || || || | ||||| || || ||| Sbjct 6990711 GCAAGAGTCCTTCCGTCTTCAAGCTGCTTGCCCGCGAATATAAGCCTCTGCTGGTCCGGT 6990770 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| ||||||||||| || || ||| ||||| || | ||||| || Sbjct 6990771 GGGATTCCCTCTTTATCTTGGATCTTGGCTTTGACATTGTCAATGGTGTCTGAGCTCTCA 6990830 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || |||||||| ||||| || || || | ||| |||||||| Sbjct 6990831 ACCTCGAGGGTGATGGTTTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 6990880 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| || || | || | || | ||| || || || ||||| Sbjct 8339662 ATACCACCACGAAGACGCAACACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCC 8339603 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || ||| || |||| || | ||||||||||| ||||| | ||| ||||| || ||| Sbjct 8339602 GCTAGTGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTTTGTTGGTCTGGT 8339543 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || ||| || || ||| || | ||||| || Sbjct 8339542 GGGATCCCTTCCTTTTCCTGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCA 8339483 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || || || ||||| || || || | ||| || ||||| Sbjct 8339482 ACTTCCAAGGTGATAGTCTTGCCAGTCAAAGTCTTCACAAAAATTTGCAT 8339433 >seq2 Length=14066726 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| ||||| | || | ||| | ||||| ||| || ||| || |||||| Sbjct 7053376 ATACCACCTCTGAGACGAAGCACAAGATGGAGAGTAGACTCCTTTTGGATGTTGTAATCA 7053435 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | ||| || |||| || || || |||||||||||||| | ||||| ||||| || Sbjct 7053436 GCAAGTGTGCGACCATCCTCTAACTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGA 7053495 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || ||| ||| ||||| |||| ||| || || Sbjct 7053496 GGAATCCCTTCCTTGTCCTGAATCTTAGCTTTAACATTGTCAATAGTATCAGAGCTCTCA 7053555 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | |||||||||||| || || || || || | ||| |||||||| Sbjct 7053556 ACCTCCAAAGTAATGGTTTTTCCTGTCAACGTCTTCACAAAGATCTGCAT 7053605 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| ||||| | ||| | ||| | ||||| ||| || ||| || |||||| Sbjct 7053148 ATACCACCTCTGAGACGAAGTACAAGATGGAGAGTAGACTCCTTTTGGATGTTGTAATCA 7053207 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | ||||| ||||||||||| | ||||||||| || ||| Sbjct 7053208 GCAAGGGTGCGACCATCTTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGT 7053267 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| || || || || ||| || || ||| || | ||||| || Sbjct 7053268 GGGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCA 7053327 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| ||||| || || || | || || | ||| |||||||| Sbjct 7053328 ACCTCCAAAGTTATGGTCTTTCCGGTAAGGGTCTTCACAAAAATCTGCAT 7053377 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| || || | || | ||||| ||||| ||| || ||||| Sbjct 7052920 ATACCACCACGAAGACGCAACACAAGGTGAAGAGTAGATTCTTTTTGGATGTTGTAATCC 7052979 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | ||| || |||| || | ||||| ||||||||||| | |||||| || || ||| Sbjct 7052980 GCAAGTGTGCGACCATCCTCAAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGGTCTGGT 7053039 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || ||||| || || ||| ||| |||||| || | ||||| || Sbjct 7053040 GGGATCCCCTCCTTATCCTGAATCTTAGCTTTGACATTATCGATTGTGTCTGAACTCTCA 7053099 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| ||||| || || || | || || | ||| |||||||| Sbjct 7053100 ACCTCCAAAGTTATGGTCTTTCCTGTGAGGGTCTTCACAAAAATCTGCAT 7053149 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | |||||| | || || || | ||| | || || ||| |||||||||| Sbjct 7052694 ACCACCACGAAGACGAAGAACCAAGTGGAGAGTTGATTCCTTTTGGATGTTATAATCAGC 7052753 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || || || |||| || | ||||| ||||||||||| | |||||| || || ||||| Sbjct 7052754 CAAAGTCCGACCATCCTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGG 7052813 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || || ||||| || || || ||| || || ||| || | ||||| || || Sbjct 7052814 GATCCCCTCTTTGTCCTGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAAC 7052873 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || | ||||| || ||||| || |||||||| | ||| || ||||| Sbjct 7052874 CTCCAAGGTAATAGTCTTACCTGTCAATGTTTTCACAAAGATTTGCAT 7052921 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | | || || || | ||| | || || ||||| ||||| Sbjct 7053604 ATACCACCTCTTAACCTGAGAACCAAGTGGAGAGTTGATTCCTTCTGTATATTGTAATCC 7053663 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || ||| |||| || | |||||||| |||||||| ||||| || ||||| || Sbjct 7053664 GCCAAGGTACGTCCATCCTCAAGCTGTTTACCGGCAAAGATCAATCTTTGCTGATCCGGA 7053723 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || || || ||||| |||| || || ||| Sbjct 7053724 GGGATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATAGTGTCAGAGCTCTCT 7053783 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||||||||| || ||||| | |||||| | || || ||||| Sbjct 7053784 ACCTCAAGAGTAATGGTCTTGCCAGTAAGTGTTTTCACGAAAATTTGCAT 7053833 >seq1 Length=19566579 Score = 111 bits (122), Expect = 3e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||| ||||| ||||| | || ||||| | || | |||||| ||| || || || | Sbjct 8289973 ACCTCCTCTCAGACGGAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGC 8289914 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | ||||| | || |||| ||||| || || ||||| | | ||| || || ||||| Sbjct 8289913 GAGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGG 8289854 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| || ||||| || || ||| ||||| || | ||||| || ||||| Sbjct 8289853 GATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGATGACTCTAC 8289794 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| || || || || || ||||| ||||| | ||| ||||||||||| Sbjct 8289793 CTCTAGGGTTATTGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCATTTT 8289743 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| || || | ||| | || | || | ||||| ||| || ||||| Sbjct 19037215 ATCCCACCTCTCAGTCGAAGTACAAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCT 19037156 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| |||| || | || || || ||||| || | ||||||||| || ||| Sbjct 19037155 GAAAGCGTTCGACCATCTTCGAGCTGCTTGCCTGCAAATATGAGTCTCTGTTGGTCTGGT 19037096 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 | || ||||| || ||||| || ||| ||| ||||| || | ||||| || Sbjct 19037095 TGGATCCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAATGGTGTCTGAACTCTCG 19037036 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||||||| |||||||||||||| || | || || | ||||||||||| Sbjct 19037035 ACTTCTAGGGTAATGGTTTTACCGGTAAGGGTCTTGACGAATATCTGCAT 19036986 Score = 98.7 bits (108), Expect = 2e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 192304 ATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAA 192363 ||| | ||||| || || | || || || || | || | |||||| |||||| ||| Sbjct 10960122 ATAGTCCCACCCCTGAGCCTCAAGACCAAGTGAAGTGTCGACTCTTTCTGGATATTGTAA 10960181 Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423 |||| | |||||| |||| || | |||||| |||||||| || | ||||||||||| Sbjct 10960182 TCAGCAAGTGTTCGACCATCTTCGAGTTGTTTCCCAGCAAATATCAGCCTCTGTTGATCC 10960241 Query 192424 GGTGGTATTCCTTCTTTATCTTGTATT 192450 ||||||||||| ||||| || ||| || Sbjct 10960242 GGTGGTATTCCCTCTTTGTCCTGTTTT 10960268 >seq7 Length=17303919 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| | || ||||| | ||| | ||| || ||| || ||||| Sbjct 14231646 ATGCCACCACGAAGACGAAGAACCAAATGCAGAGTTGACTCCTTCTGGATGTTGTAATCC 14231705 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | ||| || |||| || | ||| || || |||||||| | || ||||| || || Sbjct 14231706 GCAAGTGTCCGACCATCCTCGAGTTGCTTGCCCGCAAAGATAAGTCGTTGTTGGTCCGGA 14231765 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || ||| ||||| || | || || || Sbjct 14231766 GGGATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCAATGGTGTCAGAGCTCTCA 14231825 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||||||||||||||||||| || || | ||||| | |||||| ||||| Sbjct 14231826 ACTTCTAGAGTAATGGTTTTGCCGGTGAGAGTTTTCACAAATATTTGCAT 14231875 >seq4 Length=14994381 Score = 107 bits (118), Expect = 4e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAG 192367 |||||||||| || | || || | ||| | ||||| |||||| ||| || ||||||| Sbjct 9871047 TACCACCTCTGAGCCTCAAGACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAG 9870988 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 || ||||| |||| || | ||| |||||||||||||| | || ||||||||||||| Sbjct 9870987 CCAAGGTTCGGCCATCTTCGAGTTGCTTACCAGCAAAGATGAGCCTTTGTTGATCAGGTG 9870928 Query 192428 GTATTCCTTCTTTATCTTG 192446 |||| || ||||| || || Sbjct 9870927 GTATACCCTCTTTGTCCTG 9870909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984470249648550