Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20rubella_20[refseq_20GCF_5F000375325.1_202013-04-23] 773 sequences; 133,063,876 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq6 140 2e-28 seq4 109 4e-19 seq5 107 1e-18 seq2 105 4e-18 seq1 104 2e-17 seq7 89.7 3e-13 >seq6 Length=16577294 Score = 140 bits (154), Expect = 2e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| || ||||||||| ||||| || |||| |||| |||| |||| Sbjct 734896 AGGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCTAGGGTGCGTCCATCT 734955 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| |||| ||||||||| | || | ||| |||||||| Sbjct 734956 TCGAGCTGCTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCC 735015 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| ||||||| | || | || | ||| || || | || |||||| Sbjct 735016 TGAATTTTAGCTTTGACGTTGTCGATTGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTC 735075 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||||||||| |||||||| ||||| Sbjct 735076 TTTCCGGTGAGGGTCTTCACAAAGATTTGCAT 735107 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| |||| |||| ||| ||||| ||||| ||||| | ||| | || |||| Sbjct 735352 AGCACCAAATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCTAGTGTACGGCCATCC 735411 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || | || ||||| | || | || |||||||| Sbjct 735412 TCTAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGGATACCTTCCTTGTCC 735471 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| |||||| | || | ||| | ||| || || | ||| |||||| Sbjct 735472 TGGATCTTTGCCTTGACGTTGTCGATAGTGTCAGAGCTCTCAACCTCGAGGGTGATGGTC 735531 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| ||||| |||||||||||||| Sbjct 735532 TTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 735563 Score = 105 bits (116), Expect = 4e-18 Identities = 167/234 (71%), Gaps = 14/234 (6%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG-- 34808 ||||| | | ||| || || || |||| || ||||||||| ||||||||||| | Sbjct 2563066 CCTCCACGGAGCCTGAGAACAAGATGAAGTGTAGACTCCTTCTGGATGTTATAGTCAGCC 2563125 Query 34809 ATAGGC-TGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 | || | ||| | || || ||||||||||| |||||||||| || ||||||||| | Sbjct 2563126 AAAGTCCTGC---CGTCTTCAAGTTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGT 2563182 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGC 34923 || | |||||||| || | ||||| |||||| || | ||||| ||| | Sbjct 2563183 GGGATTCCCTCCTTATCTTGAATTTTAGCTTTGAC--AT--TGTCGATGGTGTCAGAGCT 2563238 Query 34924 CTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || | || || |||||||| || ||||| || || ||||||||||| Sbjct 2563239 CTCCACCTCCAAAGTAATAGTCTTTCCAGTAAGGGTTTTGACGAAGATCTGCAT 2563292 Score = 105 bits (116), Expect = 4e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| ||||||| ||| | |||| |||||||||||||| ||||| | | | | || | Sbjct 2563533 CCTGAGGACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGGCC 2563592 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 ||| || || ||||||||||| ||||| || | |||||| || | || | || ||||| Sbjct 2563593 ATCTTCGAGCTGCTTTCCGGCAAAGATAAGCCTTTGCTGATCCGGAGGGATACCTTCCTT 2563652 Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTAT 34941 ||| | || || || ||| | || | ||| | || || || | ||| || Sbjct 2563653 GTCCTGGATCTTGGCCTTAACGTTGTCGATTGTGTCAGAGCTTTCCACCTCGAGGGTGAT 2563712 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || ||||| ||||| |||||||||||||| Sbjct 2563713 AGTCTTCCCGGTGAGAGTCTTAACAAAGATCTGCAT 2563748 Score = 105 bits (116), Expect = 4e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| ||||||| ||| | |||| |||||||| ||||| ||||| | | | | || | Sbjct 14990144 CCTGAGGACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAAGGTACGGCC 14990085 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 ||| |||| ||||||||||||||||| || | ||||| || | || | |||||||| Sbjct 14990084 ATCCTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTT 14990025 Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTAT 34941 ||| | || || || ||| | || | ||| | || || || | ||| || Sbjct 14990024 GTCCTGGATCTTGGCCTTAACGTTGTCGATTGTGTCAGAGCTTTCCACCTCGAGGGTGAT 14989965 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| ||||| ||||| || ||||||||||| Sbjct 14989964 AGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 14989929 Score = 102 bits (112), Expect = 5e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||| || |||| ||||| ||| ||||||||| ||||| ||||| | | | |||| | Sbjct 14991056 CCTTAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGACC 14990997 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 ||| || || || ||||| |||||||| || || ||||||||| | || | || ||||| Sbjct 14990996 ATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATACCTTCCTT 14990937 Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTAT 34941 || | || || || ||| | || | ||| ||| || || | ||| || Sbjct 14990936 ATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAACTCTCCACCTCCAAGGTGAT 14990877 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || | |||||| |||||||||||||| Sbjct 14990876 AGTCTTCCCGGTCAAGGTCTTGACAAAGATCTGCAT 14990841 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| |||||||||||||| ||||| | || |||| | || Sbjct 2562625 AGGACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGCCAGTGTGCGACCGTCC 2562684 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| |||||||| || || |||||||| | || | || ||||| || Sbjct 2562685 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTATCC 2562744 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || | ||| || |||| ||| |||||| Sbjct 2562745 TGGATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTC 2562804 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | ||||| ||||| |||||||| Sbjct 2562805 TTCCCGGTCAACGTCTTCACAAAAATCTGCAT 2562836 Score = 98.7 bits (108), Expect = 6e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| ||| ||||||||||||||| || |||| ||| |||| |||| || Sbjct 8339641 ACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCCGCTAGTGTGCGACCATCCTCA 8339582 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || || || || |||||||| |||| ||| |||||| | || | ||| ||||| || | Sbjct 8339581 AGCTGTTTACCAGCGAAGATGAGTCTTTGTTGGTCTGGTGGGATCCCTTCCTTTTCCTGA 8339522 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || |||||| | || | || | ||| || || | ||| || ||||| Sbjct 8339521 ATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAACTTCCAAGGTGATAGTCTTG 8339462 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||||| ||||| || ||||| Sbjct 8339461 CCAGTCAAAGTCTTCACAAAAATTTGCAT 8339433 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| | | ||| || || || |||| |||| ||||||||| ||||| || || | Sbjct 14990383 CCTCCACGAAGCCTGAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCA 14990324 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | | | || || |||||||||||||||||||||| | |||||||| | || Sbjct 14990323 AGGGTTCTGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 14990264 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || ||| ||| | || | ||| ||| || Sbjct 14990263 ATACCCTCCTTGTCTTGGATCTTGGCTTTAACGTTGTCGATGGTGTCAGAACTCTCCACC 14990204 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || |||||||| || ||||| || || || |||||||| Sbjct 14990203 TCGAGAGTAATCGTCTTTCCGGTTAGGGTTTTGACGAAAATCTGCAT 14990157 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| ||| ||||| ||||| || || | | | |||| |||| Sbjct 6990897 AGAACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCT 6990956 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || ||||||||||||| || ||||||||| | || | || |||||||| Sbjct 6990957 TCAAGCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGAGGAATGCCTTCCTTGTCC 6991016 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || ||| || || || | ||||| ||| | |||||| |||| || || Sbjct 6991017 TGGATCTTTGCCTTAAC--AT--TGTCGATGGTGTCAGAGCTCTCGACCTCAAGAGTGAT 6991072 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || ||||| || || || || || ||||| Sbjct 6991073 GGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 6991108 Score = 86.0 bits (94), Expect = 4e-12 Identities = 152/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG--ATAGGC-TGCG 34818 ||| || || || |||| ||| ||||||||| ||||| ||||| | | || | ||| Sbjct 2563305 CCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTCCTGCC 2563364 Query 34819 CTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTC 34878 || ||| ||||||||||||||||||||||| | |||||||| | || | ||||| Sbjct 2563365 GTCCTCG---AGTTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCCTC 2563421 Query 34879 CTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGT 34938 ||| || | || || || ||| | || | ||| ||| || || | || Sbjct 2563422 CTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAACTCTCCACCTCCAAAGT 2563481 Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||| || || ||||| || ||||| ||||| Sbjct 2563482 GATAGTCTTTCCGGTCAGCGTCTTGACGAAGATTTGCAT 2563520 Score = 86.0 bits (94), Expect = 4e-12 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| || || ||||| || || | ||| | || | || || || || || ||||| || Sbjct 6990233 CTCTTTTTGGATGTTGTAATCAGCGAGGGTACGTCCGTCTTCAAGCTGTTTCCCGGCAAA 6990292 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| |||| ||||||||| | || | ||| |||||||| | || ||| |||||| Sbjct 6990293 GATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCTTGAATCTTTGCCTTGACGT- 6990351 Query 34906 TGCTATCGATTCATTG---GC-CTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 |||||||| | || ||| || || | || || ||||| || || ||||||| Sbjct 6990352 ---TATCGATTGTGTCTGAGCTCTCAACCTCCAAAGTGATAGTCTTGCCGGTTAGGGTCT 6990408 Query 34962 TTACAAAGATCTGCAT 34977 ||||||| |||||||| Sbjct 6990409 TTACAAAAATCTGCAT 6990424 >seq4 Length=14994381 Score = 109 bits (120), Expect = 4e-19 Identities = 155/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| || ||||||||| ||||| ||||| | || | | || | || Sbjct 14616809 AGGACAAGGTGAAGCGTTGACTCCTTCTGGATGTTGTAGTCGGCTAAGGTTCGTCCGTCC 14616750 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||||||||| |||| ||| |||||||| |||| | || |||||||| Sbjct 14616749 TCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCC 14616690 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| ||| | ||| || || | ||| || Sbjct 14616689 TGGATCTTGGCCTTCAC--AT--TGTCGATGGTGTCAGATGACTCTACCTCGAGGGTGAT 14616634 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| ||||| || || ||||||||||| Sbjct 14616633 CGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 14616598 >seq5 Length=13709650 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || ||||| |||| || |||||||| ||||| ||||| | || |||| | || Sbjct 13270583 AGCACCAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCGTCT 13270524 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| |||||||| |||| || |||||||| | || | ||| |||||||| Sbjct 13270523 TCCAGCTGCTTCCCGGCGAATATCAACCGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCT 13270464 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||| || | |||| || | ||| || || | |||||||||| Sbjct 13270463 TGGATCTTCGCTTTCACATTGTCGATCGTGTCTGACGACTCCACCTCTAGGGTTATGGTC 13270404 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| ||||| || || ||||||||||| Sbjct 13270403 TTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 13270372 >seq2 Length=14066726 Score = 105 bits (116), Expect = 4e-18 Identities = 154/215 (72%), Gaps = 12/215 (6%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| || || || || ||||| || |||| || |||| |||| || Sbjct 7052941 ACAAGGTGAAGAGTAGATTCTTTTTGGATGTTGTAATCCGCAAGTGTGCGACCATCCTCA 7053000 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || || ||||| || ||||| |||| ||||||||| | || | ||||||||| || | Sbjct 7053001 AGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCCTCCTTATCCTGA 7053060 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGC------CTCGACATCAACGGTTATG 34942 || || |||||| || |||||||| || | ||| || || | |||||| Sbjct 7053061 ATCTTAGCTTTGAC--AT--TATCGATTG--TGTCTGAACTCTCAACCTCCAAAGTTATG 7053114 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| ||||||||||| ||||| |||||||| Sbjct 7053115 GTCTTTCCTGTGAGGGTCTTCACAAAAATCTGCAT 7053149 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| || ||||| || || | ||| |||| |||| || || || || || || || Sbjct 7053186 CTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGACCATCTTCAAGCTGTTTCCCAGCAAA 7053245 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| |||| || |||||| | || | || |||||||| | || || |||||| Sbjct 7053246 GATGAGTCTCTGTTGGTCTGGTGGGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACGTT 7053305 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || || | |||||||||||||| || |||||||| || Sbjct 7053306 ATCAATTGTGTCTGAGCTCTCAACCTCCAAAGTTATGGTCTTTCCGGTAAGGGTCTTCAC 7053365 Query 34966 AAAGATCTGCAT 34977 ||| |||||||| Sbjct 7053366 AAAAATCTGCAT 7053377 >seq1 Length=19566579 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| |||| | || |||| |||| || ||| ||||| ||||| ||||| | Sbjct 8289972 CCTCCTCTCAGACGGAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGCG 8289913 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | | | | || ||||| || || |||||||||||||| || |||||||| | || Sbjct 8289912 AGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGGG 8289853 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||| |||||||| | || || ||| || | |||| || | ||| || Sbjct 8289852 ATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGATGACTCTACC 8289793 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||| ||||| ||||| | ||| || |||||||||||||| Sbjct 8289792 TCTAGGGTTATTGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCAT 8289746 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||||| ||| |||||| || ||||| || || | || |||| |||| Sbjct 19037882 CAGCACAAGGTGAAGGGTTGACTCCTTTTGGATGTTGTAATCTGCAAGAGTGCGACCATC 19037823 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || || || || |||||||| |||| ||| |||||| | | | ||| |||||||| Sbjct 19037822 CTCAAGCTGTTTACCAGCGAAGATGAGTCTTTGTTGGTCTGGTGCGATCCCTTCCTTGTC 19037763 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || ||| || || | || | || | ||| || || | ||||| || Sbjct 19037762 TTGGATCTTTGCCTTTACATTGTCAATTGTGTCCGAGCTCTCAACTTCCAAAGTTATTGT 19037703 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || |||||||||||||| |||||||| Sbjct 19037702 CTTTCCGGTAAGGGTCTTTACAAAAATCTGCAT 19037670 Score = 95.1 bits (104), Expect = 8e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 ||||| || || |||| || ||| ||||| ||||| || || | || |||| || Sbjct 19037656 CTCAGCACGAGATGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTGCGACCA 19037597 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || || || ||||| || || || |||| ||| |||||| | | | ||| |||||| Sbjct 19037596 TCCTCAAGCTGTTTTCCAGCAAAAATGAGTCTTTGTTGGTCTGGTGCAATCCCTTCCTTG 19037537 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || || ||| | || | ||| | ||| || || | ||||| Sbjct 19037536 TCTTGGATCTTGGCCTTCACGTTATCAATTGTGTCAGAGCTCTCAACTTCCAAAGTTATA 19037477 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| || |||||||||||||| |||||||| Sbjct 19037476 GTCTTTCCAGTAAGGGTCTTTACAAAAATCTGCAT 19037442 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 ||||| || || || | ||| ||| ||||| ||||| || || | || |||| || Sbjct 19037428 CTCAGCACAAGATGGAGGGTTGACTCTTTCTGGATGTTGTAATCTGCAAGAGTGCGGCCA 19037369 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || || || || || || ||||| |||| || |||||| | | | ||| |||||| Sbjct 19037368 TCTTCGAGCTGTTTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGATATCCCTTCCTTG 19037309 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || ||| || ||| | |||| ||| | ||| || || | |||||| Sbjct 19037308 TCTTGGATCTTTGCCTTCACGTTATCGATCGTGTCAGAGCTCTCAACTTCCAAAGTTATG 19037249 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || |||||||| || ||||||||||| Sbjct 19037248 GTTTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 19037214 >seq7 Length=17303919 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || |||||||| || |||| ||| | || |||||| ||||| || ||||| | Sbjct 14232561 CCACCTCTCAACCTAAGAACCAAGTGTAGAGTTGACTCCTTTTGAATATTGTAGTCAGCC 14232620 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | || |||| || |||||||| || || ||||| || | |||||||| | | Sbjct 14232621 AATGTACGACCATCTTCAAGTTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCCGGAGTA 14232680 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || ||||| || | || || ||||| | |||| ||| | || || Sbjct 14232681 ATACCTTCCTTATCTTGGATCTTAGCCTTGACATTGTCAATCGTGTCAGAGCTTTCAACC 14232740 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||||||||||| || || || ||||| |||||||||||||| Sbjct 14232741 TCAAGAGTTATGGTCTTCCCGGTAAGAGTCTTAACAAAGATCTGCAT 14232787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325689731668487