Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20rubella_20[refseq_20GCF_5F000375325.1_202013-04-23] 773 sequences; 133,063,876 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq2 174 3e-38 seq7 172 1e-37 seq1 167 5e-36 seq6 159 7e-34 seq5 105 1e-17 seq4 96.9 7e-15 seq3 86.0 1e-11 >seq2 Length=14066726 Score = 174 bits (192), Expect = 3e-38 Identities = 178/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| | ||| || || | || |||||||| || || || || || ||||||| Sbjct 7053377 TACCACCTCTGAGACGAAGCACAAGATGGAGAGTAGACTCCTTTTGGATGTTGTAATCAG 7053436 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | ||| || |||| || || ||||||||||| || || || ||||| |||| Sbjct 7053437 CAAGTGTGCGACCATCCTCTAACTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAG 7053496 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | || |||||||| || |||||||| ||||| ||||| ||||| |||||| || | || Sbjct 7053497 GAATCCCTTCCTTGTCCTGAATCTTAGCTTTAACATTGTCAATAGTATCA-GAGCTCTCA 7053555 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || |||||||| || || || |||||||||||||| ||||| |||||||| Sbjct 7053556 ACCTCCAAAGTAATGGTTTTTCCTGTCAACGTCTTCACAAAGATCTGCAT 7053605 Score = 168 bits (186), Expect = 1e-36 Identities = 177/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| | ||| || || | || |||||||| || || || || || ||||||| Sbjct 7053149 TACCACCTCTGAGACGAAGTACAAGATGGAGAGTAGACTCCTTTTGGATGTTGTAATCAG 7053208 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | ||| ||||| || ||||| ||||||||||| ||||| ||||| ||||| | Sbjct 7053209 CAAGGGTGCGACCATCTTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGTG 7053268 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | ||||||||||| || |||||||| || || || || ||||| || || | || | || Sbjct 7053269 GGATTCCTTCCTTGTCCTGAATCTTAGCCTTGACGTTATCAATTGTGTC-TGAGCTCTCA 7053327 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||||||||| ||||| || || | ||||| ||||| |||||||| Sbjct 7053328 ACCTCCAAAGTTATGGTCTTTCCGGTAAGGGTCTTCACAAAAATCTGCAT 7053377 Score = 165 bits (182), Expect = 2e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||||| || | ||| |||||||||||||| || || || ||||| | Sbjct 7052921 TACCACCACGAAGACGCAACACAAGGTGAAGAGTAGATTCTTTTTGGATGTTGTAATCCG 7052980 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | ||| || || || ||||||||||||||||| ||||| || || ||||| | Sbjct 7052981 CAAGTGTGCGACCATCCTCAAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGGTCTGGTG 7053040 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || |||||||| |||||||| ||||| ||||| || || || || | || | Sbjct 7053041 GGATCCCCTCCTTATCCTGAATCTTAGCTTTGACATTATCGATTGTGTCTGAACTCTCAA 7053100 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||||||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 7053101 CCTCCAAAGTTATGGTCTTTCCTGTGAGGGTCTTCACAAAAATCTGCAT 7053149 Score = 150 bits (166), Expect = 4e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| ||||| ||||| ||||| || || || |||||||||| | | | | ||| Sbjct 7052706 ACGAAGAACCAAGTGGAGAGTTGATTCCTTTTGGATGTTATAATCAGCCAAAGTCCGACC 7052765 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || ||||| ||||||||||| ||||| || || ||||| || || || || || Sbjct 7052766 ATCCTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCCTCTTT 7052825 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 || |||||||| || || || || ||||| || || | || | || || ||||| || | Sbjct 7052826 GTCCTGAATCTTAGCCTTGACGTTATCAATTGTGTC-TGAGCTCTCAACCTCCAAGGTAA 7052884 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| |||||||| || || ||||| || ||||| Sbjct 7052885 TAGTCTTACCTGTCAATGTTTTCACAAAGATTTGCAT 7052921 Score = 150 bits (166), Expect = 4e-31 Identities = 173/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| || | ||||| ||||| ||||| ||||| ||||||||||| ||||| | Sbjct 7053605 TACCACCTCTTAACCTGAGAACCAAGTGGAGAGTTGATTCCTTCTGTATATTGTAATCCG 7053664 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | || || || || ||||| || |||||||| | |||||| ||||| |||| Sbjct 7053665 CCAAGGTACGTCCATCCTCAAGCTGTTTACCGGCAAAGATCAATCTTTGCTGATCCGGAG 7053724 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | || |||||||| || ||||||||||| || ||||| || || || ||| || | ||| Sbjct 7053725 GGATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATAGTGTCA-GAGCTCTCT 7053783 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | ||| || |||||||| || | || || || || || ||||| Sbjct 7053784 ACCTCAAGAGTAATGGTCTTGCCAGTAAGTGTTTTCACGAAAATTTGCAT 7053833 >seq7 Length=17303919 Score = 172 bits (190), Expect = 1e-37 Identities = 170/217 (78%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| | ||| |||||||| |||||||| ||||| ||||| | || ||| ||| Sbjct 14231204 ACGAAGAACAAGGTGAAGAGTAGACTCTTTCTGGATATTGTAATCTGCAAGTGTTCGACC 14231263 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| |||||||| || |||||||||||||| || || || || | || ||||| || Sbjct 14231264 ATCTTCGAGTTGTTTACCGGCAAAGATTAGTCTCTGCTGGTCCGGTGTGATCCCTTCTTT 14231323 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||||||||||| || || || || |||||||||||| || | || || || | ||| | Sbjct 14231324 GTCTTGAATCTTGGCCTTCACGTTATCAATCGTATCA-GAGCTCTCGACCTCTAGAGTGA 14231382 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || ||||| ||||| ||||| ||||| |||||||| Sbjct 14231383 TGGTTTTGCCCGTCAAAGTCTTGACAAAAATCTGCAT 14231419 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || |||||||| | ||||| ||||| ||||| || || || || ||||| || |||| Sbjct 14232561 CCACCTCTCAACCTAAGAACCAAGTGTAGAGTTGACTCCTTTTGAATATTGTAGTCAGCC 14232620 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | ||| ||||| ||||| || || |||||||| || || || || || |||| Sbjct 14232621 AATGTACGACCATCTTCAAGTTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCCGGAGTA 14232680 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||||||||| ||||| || || ||||| |||||||| ||| ||| || Sbjct 14232681 ATACCTTCCTTATCTTGGATCTTAGCCTTGACATTGTCAATCGTGTCAGAGCTTTCAACC 14232740 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | |||||| ||||| || || | ||||| ||||| |||||||| Sbjct 14232741 TCAAGAGTTATGGTCTTCCCGGTAAGAGTCTTAACAAAGATCTGCAT 14232787 Score = 147 bits (162), Expect = 4e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | || || || || || ||||| || || ||||||| | | | | ||| Sbjct 14231888 ACGAAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCCAAAGTACGACC 14231947 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || |||||||| || ||||| || ||||| || || || |||| || |||||||| Sbjct 14231948 GTCCTCGAGTTGTTTACCTGCAAAAATAAGTCTCTGCTGGTCCGGAGTGATGCCTTCCTT 14232007 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 |||||| ||||| || || ||||| |||||||| ||| | ||| || || | |||||| Sbjct 14232008 ATCTTGGATCTTCGCCTTCACATTGTCAATCGTGTCAGAACTTTCGACCTCAAGAGTTAT 14232067 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | ||||| ||||| || ||||| Sbjct 14232068 GGTCTTGCCCGTAAGGGTCTTAACAAAGATTTGCAT 14232103 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||||||||| | ||||| ||||| ||||| || || ||||| ||||| ||||| | Sbjct 14232105 CCTCCTCTCAACCTAAGAACCAAGTGTAGAGTTGACTCCTTCTGAATATTGTAATCCGCC 14232164 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | | || || || ||||| || || ||| |||| ||||| || || || | | Sbjct 14232165 AAAGTACGGCCATCCTCAAGTTGCTTCCCCGCATAGATAAGTCTCTGCTGGTCCAGTAGG 14232224 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| ||||| ||||| || || ||||| ||||| || || ||| ||| Sbjct 14232225 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCGGAGCTTTCAACT 14232284 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | | |||| |||||||| || | ||||| ||||| || ||||| Sbjct 14232285 TCAAGAATTATGGTCTTGCCAGTTAGAGTCTTAACAAAGATTTGCAT 14232331 Score = 105 bits (116), Expect = 1e-17 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||||||||| | ||| | ||||| ||| ||| |||||||| ||||| ||||||| Sbjct 14232787 TACCTCCTCTCAACCTAAGAGCCAAGTGGAGAACAGACTCTTTCTGAATATTGTAATCAG 14232846 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | || || ||||| | || |||| |||||| |||||||| || ||| ||| Sbjct 14232847 CCAACGTAAGGCCATCGTCTAGCAGCTTACCAGAAAAGATAAGTCTTTGCTGGTCTAGAG 14232906 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACAT 82737 | || ||||| | |||||||||| ||| || |||| Sbjct 14232907 GAATCCCTTCTCTGTCTTGAATCTGTGCCTTGACAT 14232942 Score = 84.2 bits (92), Expect = 4e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 82663 GTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAA 82722 |||| || ||||||||||| |||| ||||| || ||||| |||||||| || ||||||| Sbjct 14230606 GTTGCTTGCCAGCAAAGATAAGTCGCTGTTGGTCCGGAGGGATTCCTTCTTTGTCTTGAA 14230665 Query 82723 TCTTTGCTTTTACATTTTCAATCGTATCA 82751 |||| || || ||||| | ||| || ||| Sbjct 14230666 TCTTAGCCTTGACATTGTAAATGGTGTCA 14230694 >seq1 Length=19566579 Score = 167 bits (184), Expect = 5e-36 Identities = 161/204 (79%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || |||||||| || || ||||||| ||| | | ||| || || || ||| Sbjct 19037644 TGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTGCGACCATCCTCAAGCTGT 19037585 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 ||||||||||| || ||||||||||| ||||| | || |||||||| ||||| ||||| Sbjct 19037584 TTTCCAGCAAAAATGAGTCTTTGTTGGTCTGGTGCAATCCCTTCCTTGTCTTGGATCTTG 19037525 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || || || ||||| || ||| || | || |||||||||||||| ||||| || || Sbjct 19037524 GCCTTCACGTTATCAATTGTGTCAG-AGCTCTCAACTTCCAAAGTTATAGTCTTTCCAGT 19037466 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | ||||||||||| |||||||| Sbjct 19037465 AAGGGTCTTTACAAAAATCTGCAT 19037442 Score = 163 bits (180), Expect = 6e-35 Identities = 168/217 (77%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 |||||| || | ||| || || || || || || || || ||||| | ||| | | ||| Sbjct 19037885 ACGCAGCACAAGGTGAAGGGTTGACTCCTTTTGGATGTTGTAATCTGCAAGAGTGCGACC 19037826 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || ||||| ||||| ||||| ||||||||||| ||||| | || |||||||| Sbjct 19037825 ATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTTTGTTGGTCTGGTGCGATCCCTTCCTT 19037766 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||||| |||||||| |||||||| ||||| || || || | || ||||||||||||| Sbjct 19037765 GTCTTGGATCTTTGCCTTTACATTGTCAATTGTGTCCG-AGCTCTCAACTTCCAAAGTTA 19037707 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || | ||||||||||| |||||||| Sbjct 19037706 TTGTCTTTCCGGTAAGGGTCTTTACAAAAATCTGCAT 19037670 Score = 149 bits (164), Expect = 1e-30 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||||||||||| ||| || || || || || || || |||||||| || || || || | Sbjct 8289973 ACCTCCTCTCAGACGGAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGC 8289914 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || |||| |||||||| || ||||| || || ||||| || | || || || || || Sbjct 8289913 GAGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGG 8289854 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| ||||| ||||| ||||| ||||| || ||||| || | ||||| Sbjct 8289853 GATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGATGACTCTAC 8289794 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 || | ||||| ||||| || || || || || ||||| ||||||||| || Sbjct 8289793 CTCTAGGGTTATTGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCATTTTT 8289742 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||| || || || | ||| || || ||||||||||| || || ||||| || Sbjct 19037212 CCACCTCTCAGTCGAAGTACAAGGTGAAGGGTTGATTCTTTCTGGATGTTGTAATCTGAA 19037153 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || ||| ||| ||||| || || || || ||||| || ||||| ||||| ||||| | Sbjct 19037152 AGCGTTCGACCATCTTCGAGCTGCTTGCCTGCAAATATGAGTCTCTGTTGGTCTGGTTGG 19037093 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| ||||||||||| ||||| ||||| ||||| || || | || ||| Sbjct 19037092 ATCCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCAATGGTGTCTGAACTCTCGACT 19037033 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || || || || || | ||||| || ||||||||||| Sbjct 19037032 TCTAGGGTAATGGTTTTACCGGTAAGGGTCTTGACGAATATCTGCAT 19036986 Score = 149 bits (164), Expect = 1e-30 Identities = 157/204 (77%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || || |||||||| || || ||||| | ||| | | || ||||| || ||| Sbjct 19037416 TGGAGGGTTGACTCTTTCTGGATGTTGTAATCTGCAAGAGTGCGGCCATCTTCGAGCTGT 19037357 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||| ||||| ||||| ||||| | ||| |||||||| ||||| |||||| Sbjct 19037356 TTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGATATCCCTTCCTTGTCTTGGATCTTT 19037297 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || || || || ||||| ||| || | || |||||||||||||| || ||||| || Sbjct 19037296 GCCTTCACGTTATCGATCGTGTCAG-AGCTCTCAACTTCCAAAGTTATGGTTTTGCCGGT 19037238 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| Sbjct 19037237 AAGGGTCTTGACGAAGATCTGCAT 19037214 Score = 123 bits (136), Expect = 5e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| | ||| ||||| || |||||||| || || ||||| | || | | ||| Sbjct 19038113 ACGGAGAACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCCGCTAAAGTGTGACC 19038054 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| || || || || |||||| | || || ||||| || || | || ||||| || Sbjct 19038053 ATCTTCGAGCTGCTTCCCTGCAAAGTTAAGCCTCTGTTGGTCCGGGTGGATCCCTTCTTT 19037994 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || ||||||| ||| || ||||| |||||||||||| ||| || || | || || Sbjct 19037993 GTCCTGAATCTGTGCCTTCACATTGTCAATCGTATCAAAGCTTTCCACCTCAAGCGTGAT 19037934 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || ||||| ||| |||||||||||||| Sbjct 19037933 GGTGCTTCCCGTCAAATCCTTAACAAATATCTGCAT 19037898 >seq6 Length=16577294 Score = 159 bits (176), Expect = 7e-34 Identities = 175/230 (76%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||||| ||||| ||||| || || || ||||||| Sbjct 6990196 TACCACCACGGAGACGAAGCACGAGATGCAGGGTAGACTCTTTTTGGATGTTGTAATCAG 6990255 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | |||||||| || ||||| || |||||||| ||||| || || ||||| | Sbjct 6990256 CGAGGGTACGTCCGTCTTCAAGCTGTTTCCCGGCAAAGATGAGTCTCTGCTGGTCTGGTG 6990315 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | || |||||||| |||||||||||||| || || || || || || || | || | || Sbjct 6990316 GGATCCCTTCCTTGTCTTGAATCTTTGCCTTGACGTTATCGATTGTGTC-TGAGCTCTCA 6990374 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || |||||||| || |||||||| || | ||||||||||| |||||||| Sbjct 6990375 ACCTCCAAAGTGATAGTCTTGCCGGTTAGGGTCTTTACAAAAATCTGCAT 6990424 Score = 159 bits (176), Expect = 7e-34 Identities = 167/217 (77%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| ||||| ||||| || || ||||| || || ||||| | || | | ||| Sbjct 8339876 ACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCCAGTGTCCGACC 8339817 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || ||||||||||| ||||| ||||| || || || ||||| || |||||||| Sbjct 8339816 ATCCTCAAGCTGTTTTCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTT 8339757 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||||| ||||| || || || || ||||| || || | || | || || ||||| || | Sbjct 8339756 GTCTTGTATCTTGGCCTTGACGTTGTCAATGGTGTC-TGAGCTCTCAACCTCCAACGTGA 8339698 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||||||||| ||||| ||||| || ||||| Sbjct 8339697 TAGTCTTGCCTGTCAAAGTCTTCACAAAGATTTGCAT 8339661 Score = 156 bits (172), Expect = 8e-33 Identities = 174/230 (76%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||||| || | ||| || || || || ||||| || || ||||| | Sbjct 8339661 TACCACCACGAAGACGCAACACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCCG 8339602 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | ||| || || || ||||| ||||| ||||| ||||||||||| ||||| | Sbjct 8339601 CTAGTGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTTTGTTGGTCTGGTG 8339542 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | || |||||||| || |||||||| || || || || ||||| || || | || | || Sbjct 8339541 GGATCCCTTCCTTTTCCTGAATCTTAGCCTTGACGTTATCAATTGTGTC-TGAGCTCTCA 8339483 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || || |||||||| ||||| ||||| ||||| || ||||| Sbjct 8339482 ACTTCCAAGGTGATAGTCTTGCCAGTCAAAGTCTTCACAAAAATTTGCAT 8339433 Score = 147 bits (162), Expect = 4e-30 Identities = 162/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| | || || ||||| || ||||| || ||||| |||| | | | || |||||| Sbjct 2563081 AGAACAAGATGAAGTGTAGACTCCTTCTGGATGTTATAGTCAGCCAAAGTCCTGCCGTCT 2563140 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||| |||||||| ||||| | ||| || || ||||| || ||||| ||||||||| Sbjct 2563141 TCAAGTTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGTGGGATTCCCTCCTTATCT 2563200 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGT 82777 ||||| || ||||| ||||| || || || ||| || | || || |||||||| || || Sbjct 2563201 TGAATTTTAGCTTTGACATTGTCGATGGTGTCA-GAGCTCTCCACCTCCAAAGTAATAGT 2563259 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| || || | || || || || |||||||| Sbjct 2563260 CTTTCCAGTAAGGGTTTTGACGAAGATCTGCAT 2563292 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| || || || || ||||| || || || |||| | | | ||| || Sbjct 14991052 AGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATCC 14990993 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || ||||||||||| ||||| || | || || |||||||| || ||||||||||| Sbjct 14990992 TCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATACCTTCCTTATCC 14990933 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || ||||| || || || || ||||| || ||| | || || ||||| || || ||| Sbjct 14990932 TGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAACTCTCCACCTCCAAGGTGATAGTC 14990873 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || ||||| ||||| ||||| |||||||| Sbjct 14990872 TTCCCGGTCAAGGTCTTGACAAAGATCTGCAT 14990841 Score = 127 bits (140), Expect = 4e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || ||||| || || ||||| ||||| || || || || | || | | ||| Sbjct 2562621 ACGGAGGACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGCCAGTGTGCGACC 2562680 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || || || |||||||| ||||| || | || || || ||||| || |||||||| Sbjct 2562681 GTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTT 2562740 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||| || ||||| || || || || ||||| || || || | || || || | || | Sbjct 2562741 ATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTC-GGAGCTCTCAACCTCAAGGGTGA 2562799 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || ||||||||||| ||||| |||||||| Sbjct 2562800 TGGTCTTCCCGGTCAACGTCTTCACAAAAATCTGCAT 2562836 Score = 125 bits (138), Expect = 1e-23 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| | || || || || || ||||| || || || |||| | | | ||| || Sbjct 2562853 AGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCC 2562912 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || ||||| ||||| ||||| || || || || || ||||| ||||||||||| || Sbjct 2562913 TCAAGCTGTTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCC 2562972 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGT 82777 || ||||| || || || || ||||| || || | || | || || ||||| ||||| || Sbjct 2562973 TGGATCTTGGCCTTCACGTTATCAATGGTGTC-TGAGCTCTCAACCTCCAAGGTTATTGT 2563031 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| || | ||||| ||||| |||||||| Sbjct 2563032 CTTGCCGGTGAGAGTCTTGACAAAAATCTGCAT 2563064 Score = 125 bits (138), Expect = 1e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | || ||||| || ||||| || ||||| || || || || || || |||| Sbjct 14990613 TACCTCCACGCAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAG 14990554 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | |||| ||||| || | || |||||||||||||| | || || || || || | Sbjct 14990553 CCAAGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTG 14990494 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || || || || || ||||| || || || || || || || ||| | || | Sbjct 14990493 GGATACCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAACTCTCCA 14990434 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || ||||| || ||||||||||| ||||| || ||||| Sbjct 14990433 CCTCCAAGGTGATAGTCTTCCCGGTCAACGTCTTGACAAAGATTTGCAT 14990385 >seq5 Length=13709650 Score = 105 bits (116), Expect = 1e-17 Identities = 162/230 (70%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| ||||| || || ||||| || |||||| | || | ||||||| Sbjct 4166024 TACCACCTCTCAACTTTAGAACCAAATGGAGAGTTGACTCTTTCGGAATGCTGTAATCAG 4166083 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | ||| || || || ||||| || |||||||| | | ||| || || ||| Sbjct 4166084 CCAAGGTACGACCATCCTCGAGCTGTTTACCGGCAAAGATCATTTGTTGCTGGTCAAGAG 4166143 Query 82702 GTATTCCTTCCTTATCTTGAATCTTT-GCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760 | |||||||| |||||||| |||||| || || || || | ||| | || ||| Sbjct 4166144 GGATTCCTTCTTTATCTTGGATCTTTTGCCTTAACTTTGTGGATCATGTCGGAGCTTTCG 4166203 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | | ||||| ||||||||||| | | || ||||| |||||||| Sbjct 4166204 ACCTTAAGAGTTACGGTCTTGCCTGTAAGACTTTTGACAAAGATCTGCAT 4166253 >seq4 Length=14994381 Score = 96.9 bits (106), Expect = 7e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| | | || || | || |||||||| |||||||| || || ||||||| Sbjct 9871047 TACCACCTCTGAGCCTCAAGACAAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAG 9870988 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| || ||||| ||||| || ||||||||||| || ||||||||||| || | Sbjct 9870987 CCAAGGTTCGGCCATCTTCGAGTTGCTTACCAGCAAAGATGAGCCTTTGTTGATCAGGTG 9870928 Query 82702 GTATTCCTTCCTTATCTTGAA 82722 |||| || || || || |||| Sbjct 9870927 GTATACCCTCTTTGTCCTGAA 9870907 Score = 96.9 bits (106), Expect = 7e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || || || || ||||| || || || || | || ||| || Sbjct 14616813 ACGGAGGACAAGGTGAAGCGTTGACTCCTTCTGGATGTTGTAGTCGGCTAAGGTTCGTCC 14616754 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || || || ||||| || || || | || || || || || || ||||||||||| Sbjct 14616753 GTCCTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGCGGGATTCCTTCCTT 14616694 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || || ||||| || || ||||| || || || ||| | ||||| || | || || Sbjct 14616693 GTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCAGATGACTCTACCTCGAGGGTGAT 14616634 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| || || | || || || || |||||||| Sbjct 14616633 CGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 14616598 >seq3 Length=15040190 Score = 86.0 bits (94), Expect = 1e-11 Identities = 121/166 (73%), Gaps = 3/166 (2%) Strand=Plus/Plus Query 82574 TTATCACCTACCTCCTCTCAAACGCAGAA-CTAAGTGCAGAGTAGATTCTTTCTGTATAT 82632 ||||| || || ||||||| ||| | | || | |||||||| |||||||||| |||| Sbjct 3032405 TTATCTCCATCC-CCTCTCAGACGAAACATCTGA-TGCAGAGTTGATTCTTTCTCAATAT 3032462 Query 82633 TATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTT 82692 | ||||||| || | | || | |||| || |||||||||||||| || || | ||| Sbjct 3032463 TGTAATCAGCTAAAGTGCTCCAATCTTTAAGCTGTTTTCCAGCAAATATCAGCTTCTGTC 3032522 Query 82693 GATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATT 82738 | || ||| ||| || ||| |||| ||||| | ||| ||||| Sbjct 3032523 GTTCAAAAGGAATTTGTTGCTTGACTTGGATCTTAGATTTAACATT 3032568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981817475922047