Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20rubella_20[refseq_20GCF_5F000375325.1_202013-04-23] 773 sequences; 133,063,876 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 seq6 109 5e-19 seq7 96.9 3e-15 >seq1 Length=19566579 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | || || | |||||||| | ||| || ||||| || || ||||||||| Sbjct 8289972 CCTCCTCTCAGACGGAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGCG 8289913 Query 27081 A-TGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | | ||||||| |||||||| |||||| | || |||||||| || ||||| || Sbjct 8289912 AGTGTT-CTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGG 8289854 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || || || || |||||| ||||| | || | ||||||| | || || Sbjct 8289853 GATCCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATCGTGTCTGATGACTCTAC 8289794 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| ||||| | || ||||| | |||||||||||||| ||||| Sbjct 8289793 CTCTAGGGTTATTGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCAT 8289746 >seq6 Length=16577294 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || ||||| || || ||||| || || | |||| | || || Sbjct 6990444 ACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGCCAAGGTGCGACCATCCTCT 6990503 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| |||||||| | || || | ||| |||||||| || | ||||||||||| | Sbjct 6990504 AGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGGATTCCCTCTTTATCTTGG 6990563 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | | || | || |||| | ||||| ||||| || || | ||| Sbjct 6990564 ATCTTAGCTTTGACATTGTCAATGGTATCTGAGCTCTCAACCTCTAGGGTGATTGTTTTA 6990623 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || ||||| ||||||||||| |||||| Sbjct 6990624 CCAGTGAGAGTCTTCACAAAGATCTGCATA 6990653 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 ||||| || | || || || || || |||||||| || | || || |||| | || || Sbjct 8339413 ACCAAGTGAAGGGTTGATTCCTTCTGGATATTGTAATC-CGCAAGTGTGCGACCATCCTC 8339355 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | ||||||||||| | || || | ||| |||||||| || | ||||||||||| Sbjct 8339354 TAATTGTTTACCGGCAAAGATAAGTCTCTGCTGATCCGGTGGGATTCCCTCTTTATCCTG 8339295 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| || | | || | |||||||| ||||| || || || || | ||| Sbjct 8339294 GATCTTAGCCTTAACATTGTCAATAGTGTCTGAACTCTCAACCTCAAGGGTGATGGTTTT 8339235 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| |||| ||| ||||||||||| |||||| Sbjct 8339234 GCCAGTCAAAGTCTTCACAAAGATCTGCATA 8339204 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| ||||| || | || || || || || || ||||||||| || | | || | Sbjct 14990827 CGCAAGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGACCA 14990768 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || | ||| || ||||| | || | | ||| || ||||| || | ||||||||| Sbjct 14990767 TCCTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCTTTG 14990708 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| |||| | | || | ||||| | | ||||||||| | || || Sbjct 14990707 TCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGCTTTCAACTTCCAAGGTGATT 14990648 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 | || || || ||||||||||| ||||| |||||| || Sbjct 14990647 GTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCATACCT 14990609 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || ||||| ||||||||||| | | | ||||||| ||||| || || Sbjct 6990684 GTCGACTCCTTTTGGATATTGTAGTCAGCAAGAGTCCTTCCGTCTTCAAGCTGCTTGCCC 6990743 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || | ||| || ||||| || | ||||||||||| ||||||| ||| Sbjct 6990744 GCGAATATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCTTGGATCTTGGCTTTG 6990803 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||||| | ||||| || || || || | |||||| |||| || Sbjct 6990804 ACATTGTCAATGGTGTCTGAGCTCTCAACCTCGAGGGTGATGGTTTTGCCAGTCAAGGTC 6990863 Query 27231 TTCACAAAGATTTGCATA 27248 ||||||||||| |||||| Sbjct 6990864 TTCACAAAGATCTGCATA 6990881 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | |||||| | ||||| || | || || || || || || ||||| || | Sbjct 735565 CCACCTCTCAACCGGAGAACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCC 735624 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | ||||||||||||||||| ||| | || | | ||| |||||||| || Sbjct 735625 AAGGTACGGCCATCTTCGAGCTGTTTACCAGCGAAGATTAATCTCTGCTGATCCGGAGGA 735684 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || |||||| |||| | || | ||||||| | || || Sbjct 735685 ATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCTGAGCTCTCGACC 735744 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || | ||||| || || ||||||||||| |||||||| Sbjct 735745 TCGAGAGTGATGGTCTTGCCAGTTAGTGTTTTCACAAAAATTTGCAT 735791 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || ||||| |||||||| || |||| |||| || Sbjct 2562628 ACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGCCAGTGTGCGACCGTCCTCA 2562687 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| || ||||| || | || || ||||| | Sbjct 2562688 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGG 2562747 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | || | ||||| | | ||||| || || || || | || Sbjct 2562748 ATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTTC 2562807 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| || |||||||| || |||||| Sbjct 2562808 CCGGTCAACGTCTTCACAAAAATCTGCATA 2562837 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 ||||| |||| ||||| ||||| || | ||||| || ||||| || |||||||| || Sbjct 14990611 CCTCCACGCAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCC 14990552 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || |||| || | ||| || || || | || | | ||| || ||||| || Sbjct 14990551 AAGGTTCTGC-CGTCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGG 14990493 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||||||| || ||||||| |||| | | || | ||||| | || || Sbjct 14990492 GATACCCTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAACTCTCCAC 14990433 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || | || |||| || || |||| || || ||||||||||||||| || Sbjct 14990432 CTCCAAGGTGATAGTCTTCCCGGTCAACGTCTTGACAAAGATTTGCATACCT 14990381 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || ||||| || |||||||| || |||| | || || |||||||| || Sbjct 14991265 GTAGACTCCTTTTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCAAGCTGTTTGCCA 14991206 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || ||||| || | ||| || || || ||||||| ||| Sbjct 14991205 GCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTC 14991146 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | || ||||| || || || | || || |||| || Sbjct 14991145 ACATTGTCAATGGTGTCGGAGCTCTCCACTTCCAGTGTGATGGTCTTCCCGGTCAAGGTC 14991086 Query 27231 TTCACAAAGATTTGCATA 27248 || |||||||| |||||| Sbjct 14991085 TTGACAAAGATCTGCATA 14991068 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || ||||| |||||||| || | | || | |||||| Sbjct 2563540 ACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGGCCATCTTCG 2563599 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || ||||| | || || | || |||||||| || | ||| || || || | Sbjct 2563600 AGCTGCTTTCCGGCAAAGATAAGCCTTTGCTGATCCGGAGGGATACCTTCCTTGTCCTGG 2563659 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | | || | ||||| | | ||| || || || || |||| || Sbjct 2563660 ATCTTGGCCTTAACGTTGTCGATTGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTC 2563719 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || ||||| || |||||||| ||||| Sbjct 2563720 CCGGTGAGAGTCTTAACAAAGATCTGCAT 2563748 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTC 27091 ||||| || | || | || || || || ||||| ||||| || ||| ||| ||| | Sbjct 8339647 CGCAACACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCCGCTAGTGT-GCGACC 8339589 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 || || ||||||||||| ||| | ||||| | ||||| || || || | || || || Sbjct 8339588 ATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTTTGTTGGTCTGGTGGGATCCCTTCCTT 8339529 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || ||||| || | | | || | ||||||| | |||||||| | || || Sbjct 8339528 TTCCTGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAACTTCCAAGGTGAT 8339469 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| |||| ||| |||||||| ||||||||| Sbjct 8339468 AGTCTTGCCAGTCAAAGTCTTCACAAAAATTTGCATA 8339432 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || || || |||||||| || | |||| | || || Sbjct 14991049 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATCCTCA 14990990 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| || ||| | ||||||||||| || || || || | ||| || ||||| | Sbjct 14990989 AGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATACCTTCCTTATCCTGG 14990930 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | || | ||||| | || || || | || |||| || Sbjct 14990929 ATCTTGGCCTTCACGTTGTCAATGGTGTCAGAACTCTCCACCTCCAAGGTGATAGTCTTC 14990870 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| || || |||||||| |||||| Sbjct 14990869 CCGGTCAAGGTCTTGACAAAGATCTGCATA 14990840 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || || || ||||| || || | || | || || Sbjct 8339869 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCCAGTGTCCGACCATCCTCA 8339810 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| || ||| | ||||| | ||| || ||||| || | || || || || Sbjct 8339809 AGCTGTTTTCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTCTTGT 8339750 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | | || | ||||||| | ||||| || | || |||| ||| Sbjct 8339749 ATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAACGTGATAGTCTTG 8339690 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| ||| |||||||||||||||||| Sbjct 8339689 CCTGTCAAAGTCTTCACAAAGATTTGCATA 8339660 >seq7 Length=17303919 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 |||||||| | || || || || || || ||||| || | || || | || | || || Sbjct 14231667 ACCAAATGCAGAGTTGACTCCTTCTGGATGTTGTAATC-CGCAAGTGTCCGACCATCCTC 14231725 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||| || || || || | || || || ||||| ||||| || | || || || || Sbjct 14231726 GAGTTGCTTGCCCGCAAAGATAAGTCGTTGTTGGTCCGGAGGGATCCCTTCCTTGTCTTG 14231785 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||||| ||| | | || | ||||| | | |||||||||||||| || | ||| Sbjct 14231786 GATCTTGGCTTTGACATTGTCAATGGTGTCAGAGCTCTCAACTTCTAGAGTAATGGTTTT 14231845 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| || |||||||||||||| |||||||| Sbjct 14231846 GCCGGTGAGAGTTTTCACAAATATTTGCAT 14231875 Score = 96.9 bits (106), Expect = 3e-15 Identities = 165/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-G 27077 |||| || | ||||| | ||||| |||| || || || ||||||||||||||||| | Sbjct 14232559 TGCCACCTCTCAACCTAAGAACCAAGTGTAGAGTTGACTCCTTTTGAATATTGTAGTCAG 14232618 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 | ||| | || | ||||| || || || || || | || || | ||| || ||||| Sbjct 14232619 CCAATG-TACGACCATCTTCAAGTTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCCGGA 14232677 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 | | ||| || ||||| |||||| || | | || | ||||| | | |||| Sbjct 14232678 GTAATACCTTCCTTATCTTGGATCTTAGCCTTGACATTGTCAATCGTGTCAGAGCTTTCA 14232737 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 || || |||||||| | || || || ||||| || |||||||| |||||| || || Sbjct 14232738 ACCTCAAGAGTTATGGTCTTCCCGGTAAGAGTCTTAACAAAGATCTGCATACCTCCT 14232794 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||||| ||||| || |||||||| || || |||| || | |||||||| |||||||| Sbjct 14231223 GTAGACTCTTTCTGGATATTGTAATCTGCAAGTGTT-CGACCATCTTCGAGTTGTTTACC 14231281 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | || || | ||| || ||||| | | || ||||| || |||||| || Sbjct 14231282 GGCAAAGATTAGTCTCTGCTGGTCCGGTGTGATCCCTTCTTTGTCTTGAATCTTGGCCTT 14231341 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | | || | || || | | || || |||||||| || | ||||||||||| ||| Sbjct 14231342 CACGTTATCAATCGTATCAGAGCTCTCGACCTCTAGAGTGATGGTTTTGCCCGTCAAAGT 14231401 Query 27230 TTTCACAAAGATTTGCAT 27247 || ||||| || ||||| Sbjct 14231402 CTTGACAAAAATCTGCAT 14231419 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| | ||||| | ||||| |||| || || || || ||||||||||| || Sbjct 14232103 TGCCTCCTCTCAACCTAAGAACCAAGTGTAGAGTTGACTCCTTCTGAATATTGTAATCCG 14232162 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | || | || || || || || || || || || || | ||| || ||| | Sbjct 14232163 CCAAAGTACGGCCATCCTCAAGTTGCTTCCCCGCATAGATAAGTCTCTGCTGGTCCAGTA 14232222 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || ||||||| || | | || | ||||| | | ||||| Sbjct 14232223 GGATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCGGAGCTTTCAA 14232282 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| ||| |||| | ||||| || ||||| || |||||||||||||| Sbjct 14232283 CTTCAAGAATTATGGTCTTGCCAGTTAGAGTCTTAACAAAGATTTGCAT 14232331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424930396719576