Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20rubella_20[refseq_20GCF_5F000375325.1_202013-04-23] 773 sequences; 133,063,876 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2 147 1e-30 seq1 134 9e-27 seq7 132 3e-26 seq6 127 1e-24 >seq2 Length=14066726 Score = 147 bits (162), Expect = 1e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||| | || | ||||||||| ||||||||| ||||| ||||| | | Sbjct 7053151 CCACCTCTGAGACGAAGTACAAGATGGAGAGTAGACTCCTTTTGGATGTTGTAATCAGCA 7053210 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | |||||||| ||||| || ||||| || | | ||||||||| || || Sbjct 7053211 AGGGTGCGACCATCTTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGG 7053270 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | ||| |||||||| ||||| | || ||| || |||||||||| |||||| || Sbjct 7053271 ATTCCTTCCTTGTCCTGAATCTTA-GCCTTGACGTTATCAATTGTGTCTGAGCTCTCAAC 7053329 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||||| || || ||||| | || ||||||||||||||||| Sbjct 7053330 CTCCAAAGTTATGGTCTTTCCGGTAAGGGTCTTCACAAAAATCTGCAT 7053377 Score = 125 bits (138), Expect = 4e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| |||||||| |||||||| ||||||||||| | Sbjct 7052695 CCACCACGAAGACGAAGAACCAAGTGGAGAGTTGATTCCTTTTGGATGTTATAATCAGCC 7052754 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || | || ||||| ||||| || ||||| || | | ||| ||||| || || Sbjct 7052755 AAAGTCCGACCATCCTCAAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 7052814 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | ||||| ||||| ||| || | || ||| || |||||||||| |||||| || Sbjct 7052815 ATCCCCTCTTTGTC-CTGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAAC 7052873 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || ||||| || || ||||||||||| || ||||| Sbjct 7052874 CTCCAAGGTAATAGTCTTACCTGTCAATGTTTTCACAAAGATTTGCAT 7052921 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||||||||| | || ||||| || ||||| ||||| ||||| | | Sbjct 7052923 CCACCACGAAGACGCAACACAAGGTGAAGAGTAGATTCTTTTTGGATGTTGTAATCCGCA 7052982 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | || ||||| ||||| || ||||| || | | ||| ||||| || || Sbjct 7052983 AGTGTGCGACCATCCTCAAGCTGTTTTCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGG 7053042 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | |||||||| || ||| || | ||| || || ||||||||| ||||| || Sbjct 7053043 ATCCCCTCCTTATC-CTGAATCTTAGCTTTGACATTATCGATTGTGTCTGAACTCTCAAC 7053101 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||||| || || || || | || ||||||||||||||||| Sbjct 7053102 CTCCAAAGTTATGGTCTTTCCTGTGAGGGTCTTCACAAAAATCTGCAT 7053149 Score = 84.2 bits (92), Expect = 1e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| |||||||| ||||| || || || ||||| | | || || | || ||| Sbjct 7053625 ACCAAGTGGAGAGTTGATTCCTTCTGTATATTGTAATCCGCCAAGGTACGTCCATCCTCA 7053684 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || |||||||||||||| || || | || || ||||| || | || |||||||| || Sbjct 7053685 AGCTGTTTACCGGCAAAGATCAATCTTTGCTGATCCGGAGGGATCCCTTCCTTGTC-CTG 7053743 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | |||| ||||| | || ||||| |||||| || || | || || || || Sbjct 7053744 AATCTTTGCCTTAACATTGTCGATAGTGTCAGAGCTCTCTACCTCAAGAGTAATGGTCTT 7053803 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | |||||||| ||||| ||||| Sbjct 7053804 GCCAGTAAGTGTTTTCACGAAAATTTGCAT 7053833 >seq1 Length=19566579 Score = 134 bits (148), Expect = 9e-27 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||| | ||||||||| || || ||| || || ||||| || || | Sbjct 8289972 CCTCCTCTCAGACGGAGCACCAAATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGCG 8289913 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||||| | ||||||| || ||||| ||||| || || | |||||| |||||||| || Sbjct 8289912 AGTGTTCTCCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGGG 8289853 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| |||||| | ||| || | || |||||| ||| || Sbjct 8289852 ATCCCTTCCTTGTCTTGGATCTTC-GCTTTCACATTGTCGATCGTGTCTGATGACTCTAC 8289794 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || | |||||| || || || ||||| ||||||||||| |||||||| || Sbjct 8289793 CTCTAGGGTTATTGTCTTCCCCGTTAAGGTTTTCACAAAGATCTGCATTTT 8289743 Score = 125 bits (138), Expect = 4e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||||| ||| | || || || ||||||||| ||||| ||||||| | Sbjct 19037896 CCACCACGAAGACGCAGCACAAGGTGAAGGGTTGACTCCTTTTGGATGTTGTAATCTGCA 19037837 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| |||||||| || || || | | |||||||| || | Sbjct 19037836 AGAGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTTTGTTGGTCTGGTGCG 19037777 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | || ||||||||| ||||||| |||| ||||||||| |||||| ||| Sbjct 19037776 ATCCCTTCCTTGTCTTGGATCTTTGCCTTTACATTGTCAATTGTGTCCGAGCTCTCAACT 19037717 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||||| || || ||||| | || || |||||||||||||| Sbjct 19037716 TCCAAAGTTATTGTCTTTCCGGTAAGGGTCTTTACAAAAATCTGCAT 19037670 Score = 113 bits (124), Expect = 3e-20 Identities = 157/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 || ||| | ||| ||||| ||| || || ||||| ||||| | ||| || || | || Sbjct 19037654 CAGCACGAGATGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTGCGACCATC 19037595 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCT-CCTTGT 34612 ||||| ||||| || ||||| || | | |||||||| || | || ||||| |||||| Sbjct 19037594 CTCAAGCTGTTTTCCAGCAAAAATGAGTCTTTGTTGGTCTGGTG-CAATCCCTTCCTTGT 19037536 Query 34613 CTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATC 34671 || |||||| | || ||| || ||||||||| |||||| ||||||| ||||| Sbjct 19037535 CTTGGATCTTG-GCCTTCACGTTATCAATTGTGTCAGAGCTCTCAACTTCCAAAGTTATA 19037477 Query 34672 GTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || | || || |||||||||||||| Sbjct 19037476 GTCTTTCCAGTAAGGGTCTTTACAAAAATCTGCAT 19037442 Score = 109 bits (120), Expect = 3e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 || || || ||||| ||||||||||| ||||| | ||||| || || || || |||||| Sbjct 19037176 TCTTTCTGGATGTTGTAATCTGAAAGCGTTCGACCATCTTCGAGCTGCTTGCCTGCAAAT 19037117 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | | ||||||||| || | | || ||||||||| ||| || | |||||| | Sbjct 19037116 ATGAGTCTCTGTTGGTCTGGTTGGATCCCTTCCTTGTCT-TGAATCTTAGCTTTAACATT 19037058 Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 ||| |||||| ||||| ||||| | ||| || ||||||||||| | || || || Sbjct 19037057 GTCAATGGTGTCTGAACTCTCGACTTCTAGGGTAATGGTTTTACCGGTAAGGGTCTTGAC 19036998 Query 34695 AAAAATCTGCAT 34706 || |||||||| Sbjct 19036997 GAATATCTGCAT 19036986 >seq7 Length=17303919 Score = 132 bits (146), Expect = 3e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||| | |||||||| ||||| |||||| || ||||| ||||| | Sbjct 14231648 GCCACCACGAAGACGAAGAACCAAATGCAGAGTTGACTCCTTCTGGATGTTGTAATCCGC 14231707 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 |||||| || | || || ||||| || || ||||| || | || ||||||||||| || Sbjct 14231708 AAGTGTCCGACCATCCTCGAGTTGCTTGCCCGCAAAGATAAGTCGTTGTTGGTCCGGAGG 14231767 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | || ||||||||| |||| || | ||| || | ||| ||||| |||||| | Sbjct 14231768 GATCCCTTCCTTGTCTTGGATC-TTGGCTTTGACATTGTCAATGGTGTCAGAGCTCTCAA 14231826 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| | || || ||||| ||||| | ||||||||||| || |||||| Sbjct 14231827 CTTCTAGAGTAATGGTTTTGCCGGTGAGAGTTTTCACAAATATTTGCATG 14231876 Score = 113 bits (124), Expect = 3e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || ||||| ||| || || || || ||||||| ||||||||| | ||||| |||||| Sbjct 14231217 TGAAGAGTAGACTCTTTCTGGATATTGTAATCTGCAAGTGTTCGACCATCTTCGAGTTGT 14231276 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||||||||| |||| | ||| |||||||| | | || || |||||| ||| || Sbjct 14231277 TTACCGGCAAAGATTAGTCTCTGCTGGTCCGGTGTGATCCCTTCTTTGTCT-TGAATCTT 14231335 Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| || ||| || || |||||| || || | || || ||||| || || Sbjct 14231336 GGCCTTCACGTTATCAATCGTATCAGAGCTCTCGACCTCTAGAGTGATGGTTTTGCCCGT 14231395 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 || || || |||||||||||||| Sbjct 14231396 CAAAGTCTTGACAAAAATCTGCAT 14231419 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || ||||| |||||||||||| || || || | | ||| || | |||||| Sbjct 14232579 ACCAAGTGTAGAGTTGACTCCTTTTGAATATTGTAGTCAGCCAATGTACGACCATCTTCA 14232638 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || || ||||| || | | ||| |||||||| | | || ||||| ||| | Sbjct 14232639 AGTTGCTTGCCTGCAAAGATAAGCCTCTGCTGGTCCGGAGTAATACCTTCCTTATCTTGG 14232698 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || | || || | ||| ||||| ||| || || || | ||||| || || Sbjct 14232699 ATC-TTAGCCTTGACATTGTCAATCGTGTCAGAGCTTTCAACCTCAAGAGTTATGGTCTT 14232757 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | || || ||||| |||||||| Sbjct 14232758 CCCGGTAAGAGTCTTAACAAAGATCTGCAT 14232787 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || || || |||||| ||||| || ||||| | ||| ||||| | || || Sbjct 14232351 ACCAAGTGAAGTGTTGACTCCTTCTGAATATTGTAATCAGCAAGGGTTCGACCATCCTCG 14232410 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || || ||| || | | || |||||||| | | ||| |||||||| | Sbjct 14232411 AGTTGCTTGCCCGCATGGATAAGTCTTTGCTGGTCCGGTAGGATTCCTACCTTGTCTTGG 14232470 Query 34618 ATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||||| | || || | ||| ||||| |||||| ||||| | | || ||||| Sbjct 14232471 ATCTTG-GCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACTTCTAGAATAATGGTTTT 14232529 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| | ||||||||||| || |||||| Sbjct 14232530 GCCGGTGAGAGTTTTCACAAATATTTGCATG 14232560 >seq6 Length=16577294 Score = 127 bits (140), Expect = 1e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| | ||| || || ||| ||||| ||||| ||||| | || || || Sbjct 6990207 AGACGAAGCACGAGATGCAGGGTAGACTCTTTTTGGATGTTGTAATCAGCGAGGGTACGT 6990266 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||||||||| ||||| |||||||| || | | ||| ||||| || || | || ||| Sbjct 6990267 CCGTCTTCAAGCTGTTTCCCGGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCC 6990326 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||||| | || ||| || ||||||||| |||||| || |||| || Sbjct 6990327 TTGTCTTGAATCTTT-GCCTTGACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAAAGT 6990385 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||||| || || |||||||||||||| Sbjct 6990386 GATAGTCTTGCCGGTTAGGGTCTTTACAAAAATCTGCAT 6990424 Score = 125 bits (138), Expect = 4e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | |||||| | ||||| || ||||| |||||| || ||||| ||||||| | Sbjct 6989970 CCGCCACGAAGACGAAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCTGCA 6990029 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| ||||| || || || || | | ||| ||||| || || Sbjct 6990030 AGAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGG 6990089 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||||| | ||||||| || ||| |||||| |||||| || Sbjct 6990090 ATCCCTTCCTTGTCCTGAATCTTG-GCTTTAACGTTATCAATAGTGTCTGAGCTCTCAAC 6990148 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || || || ||||| | || ||||||||||| ||||| Sbjct 6990149 CTCCAAAGTGATGGTCTTGCCGGTAAGGGTCTTCACAAAAATTTGCAT 6990196 Score = 125 bits (138), Expect = 4e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||||||||| | || || || |||||| |||||||| ||||| | Sbjct 8339659 CCACCACGAAGACGCAACACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCCGCT 8339600 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | || ||||| |||||||| || || || | | |||||||| || || Sbjct 8339599 AGTGTGCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTTTGTTGGTCTGGTGGG 8339540 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | || ||||| || ||| || | || ||| || |||||||||| |||||| || Sbjct 8339539 ATCCCTTCCTTTTC-CTGAATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAAC 8339481 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| ||| || || || || || || || ||||||||||| ||||| Sbjct 8339480 TTCCAAGGTGATAGTCTTGCCAGTCAAAGTCTTCACAAAAATTTGCAT 8339433 Score = 123 bits (136), Expect = 2e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| || ||| |||||| || ||||| ||||| | ||| |||| |||| || ||||| Sbjct 14990360 ATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTCGAGTTG 14990301 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || ||||| || || || | ||| |||||||| || | |||||||||||| |||| | Sbjct 14990300 CTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATC-T 14990242 Query 34623 TTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | | ||||||| | || ||||| |||||||| || | || ||||| || |||| Sbjct 14990241 TGGCTTTAACGTTGTCGATGGTGTCAGAACTCTCCACCTCGAGAGTAATCGTCTTTCCGG 14990182 Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706 ||| ||||| || ||||||||||| Sbjct 14990181 TTAGGGTTTTGACGAAAATCTGCAT 14990157 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||| | |||||||||||| ||| ||| || || ||||| ||||| | Sbjct 6990426 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGCC 6990485 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || | || || || || ||||||||||| || | | ||| || ||||| || Sbjct 6990486 AAGGTGCGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGATCCGGTGGG 6990545 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||| || ||| |||| || | ||| || | ||| || ||| |||||| || Sbjct 6990546 ATTCCCTCTTTATCTTGGATC-TTAGCTTTGACATTGTCAATGGTATCTGAGCTCTCAAC 6990604 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || |||||||| || | || |||||||| |||||||| Sbjct 6990605 CTCTAGGGTGATTGTTTTACCAGTGAGAGTCTTCACAAAGATCTGCAT 6990652 Score = 118 bits (130), Expect = 7e-22 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || || ||||| |||||||| || |||| ||||| || Sbjct 2562619 AGACGGAGGACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCTGCCAGTGTGCGA 2562678 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || || || || || || | |||||| |||||||| || | || ||| Sbjct 2562679 CCGTCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCC 2562738 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || |||||| | || ||| | ||| ||||| |||||| || || | ||| Sbjct 2562739 TTATCCTGGATCTTG-GCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGT 2562797 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| ||||| ||||||||||||||||| Sbjct 2562798 GATGGTCTTCCCGGTCAACGTCTTCACAAAAATCTGCAT 2562836 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| ||||| | ||||||||| || ||| ||| || || ||||| || || | Sbjct 735337 CCACCTCTCAGACGAAGCACCAAATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCT 735396 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | || || || || ||||||||||| || | | |||||||||||| || Sbjct 735397 AGTGTACGGCCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGG 735456 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| |||| |||| || ||| | || ||||| |||||| || Sbjct 735457 ATACCTTCCTTGTCCTGGATC-TTTGCCTTGACGTTGTCGATAGTGTCAGAGCTCTCAAC 735515 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || || ||||| | || || ||||| |||||||| Sbjct 735516 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 735563 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | ||| | ||||||||||| ||| ||| || || ||||| ||||| | Sbjct 6990882 CCACCTCTTAAACGGAGAACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAATCGGCC 6990941 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || | |||||||| ||||||||||| || || || | || |||||||| || Sbjct 6990942 AAGGTGCGGCCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTTTGCTGGTCCGGAGGA 6991001 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| |||| |||| ||||| | || ||||| |||||| || Sbjct 6991002 ATGCCTTCCTTGTCCTGGATC-TTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCGAC 6991060 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || ||||| || | |||||||| ||||| ||||| Sbjct 6991061 CTCAAGAGTGATGGTCTTACCAGTGAGTGTTTTCACGAAAATTTGCAT 6991108 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| || ||||| || || | | ||| || | || ||||| ||||| || || || Sbjct 2562873 CTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGTTTGCCAGCGAA 2562932 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | | ||| |||||||| || | ||| |||||||| |||||| | || ||| Sbjct 2562933 GATGAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGGATCTTG-GCCTTCACGT 2562991 Query 34635 TAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 || ||| |||||| |||||| || |||| |||||| || || ||||| | || || | Sbjct 2562992 TATCAATGGTGTCTGAGCTCTCAACCTCCAAGGTTATTGTCTTGCCGGTGAGAGTCTTGA 2563051 Query 34694 CAAAAATCTGCAT 34706 ||||||||||||| Sbjct 2563052 CAAAAATCTGCAT 2563064 Score = 104 bits (114), Expect = 1e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || || ||||| || || || ||||| | |||||| || Sbjct 8339422 AGACGAAGAACCAAGTGAAGGGTTGATTCCTTCTGGATATTGTAATCCGCAAGTGTGCGA 8339363 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || | ||||||||||||||| || | | ||| || ||||| || | |||||| Sbjct 8339362 CCATCCTCTAATTGTTTACCGGCAAAGATAAGTCTCTGCTGATCCGGTGGGATTCCCTCT 8339303 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || |||| || | ||||| | ||| |||||| ||||| || || | ||| Sbjct 8339302 TTATCCTGGATC-TTAGCCTTAACATTGTCAATAGTGTCTGAACTCTCAACCTCAAGGGT 8339244 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| || || || || |||||||| |||||||| Sbjct 8339243 GATGGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 8339205 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | || | ||||| ||||| || |||||| || ||||| ||||| | Sbjct 735565 CCACCTCTCAACCGGAGAACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCC 735624 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || | ||||| || |||||||| || || ||||| | ||| || ||||| || Sbjct 735625 AAGGTACGGCCATCTTCGAGCTGTTTACCAGCGAAGATTAATCTCTGCTGATCCGGAGGA 735684 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||||||| | || || | || |||||| |||||| || Sbjct 735685 ATGCCTTCCTTGTCCTGGATCTTT-GCCTTCACATTGTCGATGGTGTCTGAGCTCTCGAC 735743 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || || || |||| |||||||||||||| ||||| Sbjct 735744 CTCGAGAGTGATGGTCTTGCCAGTTAGTGTTTTCACAAAAATTTGCAT 735791 Score = 102 bits (112), Expect = 5e-17 Identities = 158/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG--AAAGTGTTC 34546 ||||| | || | ||| || || ||||||||| ||||| || || | |||||| | Sbjct 14991286 AGACGGAGGACGAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCCAAAGTG--C 14991229 Query 34547 GCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCT 34606 | | || ||||| ||||| || || || || | |||||| |||||||| || | || | Sbjct 14991228 GACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTT 14991169 Query 34607 CCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACG 34665 ||||||| |||||| | || || | ||| ||||| |||||||||||||| Sbjct 14991168 CCTTGTCCTGGATCTTG-GCCTTCACATTGTCAATGGTGTCGGAGCTCTCCACTTCCAGT 14991110 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || ||||| || || || ||||| |||||||| Sbjct 14991109 GTGATGGTCTTCCCGGTCAAGGTCTTGACAAAGATCTGCAT 14991069 Score = 100 bits (110), Expect = 2e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || || || |||||| || ||||| ||||| | || || || Sbjct 735118 AGACGAAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCCGCTAGGGTGCGT 735177 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || || || || || || || | | ||| ||||| || || | || ||| Sbjct 735178 CCATCTTCGAGCTGCTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCC 735237 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||||| | ||| ||| | |||||||| ||||||||| |||| || Sbjct 735238 TTGTCCTGAATCTTG-GCTTTGACGTTGTCGATTGTGTCAGAGCTCTCCACCTCCAAAGT 735296 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||||| || || |||||||||||||| Sbjct 735297 GATGGTCTTGCCGGTTAGGGTCTTGACAAAAATCTGCAT 735335 Score = 91.5 bits (100), Expect = 9e-14 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTG--AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCA 34572 |||||| || |||||||| || | ||||| | || ||||||||||||| || || || Sbjct 2563101 CTCCTTCTGGATGTTATAGTCAGCCAAAGTCCT-GC-CGTCTTCAAGTTGCTTTCCAGCG 2563158 Query 34573 AATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC 34632 || || || | ||| ||||| || || | ||||||||| ||| ||| ||| | ||| || Sbjct 2563159 AAGATCAATCTCTGCTGGTCTGGTGGGATTCCCTCCTTATCT-TGAATTTTAGCTTTGAC 2563217 Query 34633 GAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTT 34691 | || ||||| ||||||||| |||| || || || || || || | ||||| Sbjct 2563218 ATTGTCGATGGTGTCAGAGCTCTCCACCTCCAAAGTAATAGTCTTTCCAGTAAGGGTTTT 2563277 Query 34692 CACAAAAATCTGCAT 34706 || || |||||||| Sbjct 2563278 GACGAAGATCTGCAT 2563292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314726634952109