Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20rubella_20[refseq_20GCF_5F000375325.1_202013-04-23] 773 sequences; 133,063,876 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq6 116 3e-21 seq1 107 1e-18 seq7 98.7 7e-16 seq2 98.7 7e-16 >seq6 Length=16577294 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||| ||||| || || || |||||||| || || || | | Sbjct 6991108 ATGCAAATTTTCGTGAAAACACTCACTGGTAAGACCATCACTCTTGAGGTCGAGAGCTCT 6991049 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| |||| |||| | | ||||| ||||| | || || || || Sbjct 6991048 GACACCATCGACAATGTTAAGGCAAAGA-TCCAGGACAAGGAAGGCATTCCTCCGGACCA 6990990 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | || || || ||||| ||||| || ||||| | ||||| || | ||||||||| Sbjct 6990989 GCAAAGATTGATCTTCGCCGGTAAACAGCTTGAAGATGGCCGCACCTTGGCCGATTACAA 6990930 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || ||||||||||| | ||||| ||| Sbjct 6990929 CATCCAGAAAGAGTCCACCCTCCATTTGGTT 6990899 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||| ||||| || || || ||||||||||| ||||| | | Sbjct 8338977 ATGCAAATTTTCGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTTGAGAGCTCT 8339036 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| |||| | || | | ||||| ||||| | || || ||||| Sbjct 8339037 GACACCATTGACAATGTTAAGGCGAAGA-TCCAGGACAAGGAAGGCATTCCTCCGGATCA 8339095 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | || || || || || ||||| || ||||| | || || || | |||||||| Sbjct 8339096 GCAAAGATTGATCTTCGCTGGTAAACAGCTAGAAGATGGCCGTACCTTGGCAGATTACAA 8339155 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || |||||||| || | ||||| ||| | || || |||| || Sbjct 8339156 CATCCAGAAAGAGTCAACCCTTCATTTGGTTCTCCGGCTGAGAGGTGG 8339203 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| |||||||| || ||||| ||||| |||||||| || || | Sbjct 14990157 ATGCAGATTTTCGTCAAAACCCTAACCGGAAAGACGATTACTCTCGAGGTGGAGAGTTCT 14990216 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || ||||| | || | | ||||| || ||| | || || || || Sbjct 14990217 GACACCATCGACAACGTTAAAGCCAAGA-TCCAAGACAAGGAGGGTATCCCTCCGGACCA 14990275 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || ||||| || ||||| || |||| | || | | ||||||||| Sbjct 14990276 GCAGAGGTTGATCTTCGCCGGAAAGCAACTCGAGGACGGCAGAACCCTTGCCGATTACAA 14990335 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || |||||||| | ||| | ||| | ||| | || ||||| Sbjct 14990336 CATCCAGAAGGAGTCCACCCTTCATCTTGTTCTCAGGCTTCGTGGAGG 14990383 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || || || || |||||| | || ||||| | | Sbjct 6990424 ATGCAGATTTTTGTAAAGACCCTAACCGGCAAGACTATCACTTTGGAGGTTGAGAGCTCA 6990365 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || ||| ||| ||||| ||||| | || ||||| || Sbjct 6990364 GACACAATCGATAACGTCAAGGCAAAGATTCAAGACAAGGAAGGGATCCCACCAGACCAG 6990305 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || |||||||| ||||| || ||||||| ||| || | | ||||||||| Sbjct 6990304 CAGAGACTCATCTTTGCCGGGAAACAGCTTGAAGACGGACGTACCCTCGCTGATTACAAC 6990245 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||||||||| || Sbjct 6990244 ATCCAAAAAGAGTCTAC 6990228 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || ||||| || || || || || ||||||||||| || || | | Sbjct 735791 ATGCAAATTTTTGTGAAAACACTAACTGGCAAGACCATCACTCTCGAGGTCGAGAGCTCA 735732 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || |||| | | ||||| ||||| | || || ||||| Sbjct 735731 GACACCATCGACAATGTGAAGGCAAAGA-TCCAGGACAAGGAAGGCATTCCTCCGGATCA 735673 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | ||||| || || || ||||| || ||||| | || || || | |||||||| Sbjct 735672 GCAGAGATTAATCTTCGCTGGTAAACAGCTCGAAGATGGCCGTACCTTGGCTGATTACAA 735613 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || ||||| || | || || ||| | ||||| |||| || Sbjct 735612 CATCCAGAAGGAGTCGACCCTCCACTTGGTTCTCCGGTTGAGAGGTGG 735565 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || ||||| || || || ||||| ||||| ||||| | | Sbjct 735563 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTTGAGAGCTCT 735504 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | || ||| || ||||| |||||| | || || || ||| Sbjct 735503 GACACTATCGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAA 735444 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || |||||||| || || || || || | || || ||| || |||||| Sbjct 735443 CAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGCCGTACACTAGCTGACTACAAC 735384 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || || ||||||||||| | ||||| || Sbjct 735383 ATCCAGAAAGAGTCCACCCTTCATTTGGT 735355 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || ||||| || ||||| ||||| || || ||||| | | Sbjct 6990652 ATGCAGATCTTTGTGAAGACTCTCACTGGTAAAACAATCACCCTAGAGGTTGAGAGCTCA 6990593 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | ||| | || | | || ||||| || | || || ||||| Sbjct 6990592 GATACCATTGACAATGTCAAAGCTAAGA-TCCAAGATAAAGAGGGAATCCCACCGGATCA 6990534 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || |||||||| || || || || || | ||||| || | |||||||| Sbjct 6990533 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACCTTGGCTGATTACAA 6990474 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || ||||||||||| | ||||| || Sbjct 6990473 CATCCAGAAAGAGTCCACCCTCCATTTGGT 6990444 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || |||||||| ||||| || |||||| | || ||||| | | Sbjct 735107 ATGCAAATCTTTGTGAAGACCCTCACCGGAAAGACCATCACTTTGGAGGTTGAGAGCTCA 735048 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | ||| |||||| ||||| ||||| | || ||||| || Sbjct 735047 GACACAATCGACAACGTCAAAGCTAAAATTCAGGACAAGGAAGGGATCCCACCAGACCAG 734988 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || || || || || || ||||| | |||||| ||| ||||||||| Sbjct 734987 CAGAGACTCATCTTCGCTGGGAAGCAGCTCGAAGATGGACGCACCCTAGCGGATTACAAC 734928 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 734927 ATCCAGAAGGAGTCGAC 734911 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || ||||| || || || || |||||| | || ||||| | | Sbjct 6990196 ATGCAAATTTTTGTGAAGACCCTTACCGGCAAGACCATCACTTTGGAGGTTGAGAGCTCA 6990137 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| || ||||| | || | || ||||| ||||| | || ||||| || Sbjct 6990136 GACACTATTGATAACGTTAAAGCCAAGA-TTCAGGACAAGGAAGGGATCCCACCAGACCA 6990078 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || || || ||||| || || || | || ||| | | |||||||| Sbjct 6990077 GCAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGGACTCTTGCAGATTACAA 6990018 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||| || | || || ||| Sbjct 6990017 CATCCAGAAGGAGTCTACTCTTCACTTGGTT 6989987 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || || || || |||||| | || || || | | Sbjct 735335 ATGCAGATTTTTGTCAAGACCCTAACCGGCAAGACCATCACTTTGGAGGTGGAGAGCTCT 735276 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | ||| || ||| ||||| ||||| | || ||||| || Sbjct 735275 GACACAATCGACAACGTCAAAGCCAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAG 735216 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || || || || || || ||||| | |||||| ||| ||||||||| Sbjct 735215 CAGAGACTCATCTTCGCTGGGAAGCAGCTCGAAGATGGACGCACCCTAGCGGATTACAAC 735156 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 735155 ATCCAGAAGGAGTCTAC 735139 >seq1 Length=19566579 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || ||||| || ||| | |||||||| | | Sbjct 19037214 ATGCAGATCTTCGTCAAGACCCTTACCGGCAAAACCATAACTTTGGAAGTTGAGAGCTCT 19037273 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || ||| || ||||| ||||| || | ||||| ||| Sbjct 19037274 GACACGATCGATAACGTGAAGGCAAAGATCCAAGACAAGGAAGGGATATCACCAGACCAA 19037333 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| |||||||| || ||||| | |||||| | | ||||||||| Sbjct 19037334 CAGAGACTCATCTTTGCAGGCAAACAGCTCGAAGATGGCCGCACTCTTGCAGATTACAAC 19037393 Query 23791 ATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 19037394 ATCCAGAAAGAGTCAAC 19037410 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || |||||| | ||||| || || || || || || || || || Sbjct 8289743 AAAATGCAGATCTTTGTGAAAACCTTAACGGGGAAGACAATAACCCTAGAGGTAGAGTCA 8289802 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | ||| | || || ||||| ||||| | || || || Sbjct 8289803 TCAGACACGATCGACAATGTGAAAGC-GAAGATCCAAGACAAGGAAGGGATCCCACCGGA 8289861 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || |||||| | || || ||||| ||||| |||||||||| | || | | ||| || Sbjct 8289862 CCAGCAGCGTCTGATCTTCGCCGGGAAACAGCTGGAAGACGGGAGAACACTCGCCGACTA 8289921 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| || |||||||| || | ||||| || | | || ||||||| Sbjct 8289922 CAACATCCAGAAAGAGTCGACGCTTCATTTGGTGCTCCGTCTGAGAGGAGG 8289972 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || ||||| || || ||| | |||||||| | || Sbjct 19037670 ATGCAGATTTTTGTAAAGACCCTTACCGGAAAGACAATAACTTTGGAAGTTGAGAGCTCG 19037729 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | |||| ||| || ||||| ||||| | | ||||| ||| Sbjct 19037730 GACACAATTGACAATGTAAAGGCAAAGATCCAAGACAAGGAAGGGATCGCACCAGACCAA 19037789 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | | || || || || ||||| || || || | |||||| | | ||||||||| Sbjct 19037790 CAAAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGCACTCTTGCAGATTACAAC 19037849 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| ||||| || Sbjct 19037850 ATCCAAAAGGAGTCAAC 19037866 Score = 95.1 bits (104), Expect = 8e-15 Identities = 145/202 (72%), Gaps = 10/202 (5%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || ||||| || || || ||||| || | Sbjct 19036986 ATGCAGATATTCGTCAAGACCCTTACCGGTAAAACCATTACCCTAGAAGTCGAGAGTTCA 19037045 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| ||||| | || | || ||||| ||||| | | ||||| || Sbjct 19037046 GACACCATTGACAATGTTAAAGCTAAGA-TTCAAGACAAGGAAGGGATCCAACCAGACCA 19037104 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGA----CGAACGCACTTTAGGCGATT 23785 |||| | | |||||||| ||||| || || ||||| ||||||| || || ||| Sbjct 19037105 ACAGAGACTCATATTTGCAGGCAAGCAGCTCGAAGATGGTCGAACGCT-TTCAG---ATT 19037160 Query 23786 ACAACATACAAAAAGAGTCCAC 23807 ||||||| || ||||| || || Sbjct 19037161 ACAACATCCAGAAAGAATCAAC 19037182 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || ||||| || || ||| | |||||||| | | Sbjct 19037442 ATGCAGATTTTTGTAAAGACCCTTACTGGAAAGACTATAACTTTGGAAGTTGAGAGCTCT 19037501 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| ||||| | | ||||| ||| Sbjct 19037502 GACACAATTGATAACGTGAAGGCCAAGATCCAAGACAAGGAAGGGATTGCACCAGACCAA 19037561 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | | || ||||| || ||||| || || || | |||||| | | ||||||||| Sbjct 19037562 CAAAGACTCATTTTTGCTGGAAAACAGCTTGAGGATGGTCGCACTCTTGCTGATTACAAC 19037621 Query 23791 ATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 19037622 ATCCAGAAAGAGTCAAC 19037638 >seq7 Length=17303919 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| ||||| || ||||| || ||||| |||||||| | | Sbjct 14231875 ATGCAAATATTTGTGAAAACTCTCACCGGCAAAACCATTACTCTAGAAGTTGAGAGCTCT 14231816 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | ||||| ||||| | || || || || Sbjct 14231815 GACACCATTGACAATGTCAAAGCCAAGA-TCCAAGACAAGGAAGGGATCCCTCCGGACCA 14231757 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || | || ||||| ||||| ||||| || || | || || | | |||||||| Sbjct 14231756 ACAACGACTTATCTTTGCGGGCAAGCAACTCGAGGATGGTCGGACACTTGCGGATTACAA 14231697 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||| || | ||||| ||| Sbjct 14231696 CATCCAGAAGGAGTCAACTCTGCATTTGGTT 14231666 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || | ||||| ||||| |||||||| || || || | | Sbjct 14231419 ATGCAGATTTTTGTCAAGACTTTGACGGGCAAAACCATCACTCTAGAGGTCGAGAGCTCT 14231360 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | || || ||| ||||||||||| | | || || || Sbjct 14231359 GATACGATTGATAACGTGAAGGCCAAGATTCAAGACAAAGAAGGGATCACACCGGACCAG 14231300 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | |||| |||||||| |||||||| ||||| | || || | | |||||||| Sbjct 14231299 CAGAGACTAATCTTTGCCGGTAAACAACTCGAAGATGGTCGAACACTTGCAGATTACAAT 14231240 Query 23791 ATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 14231239 ATCCAGAAAGAGTCTAC 14231223 >seq2 Length=14066726 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||||| || ||||| || || ||| | || ||||| | | Sbjct 7053377 ATGCAGATTTTTGTGAAGACCCTTACCGGAAAGACCATAACTTTGGAGGTTGAGAGCTCA 7053318 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || ||| ||||| ||||| | || ||||| ||| Sbjct 7053317 GACACAATTGATAACGTCAAGGCTAAGATTCAGGACAAGGAAGGAATCCCACCAGACCAA 7053258 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || ||||| || ||||| | ||||| | | ||||||||| Sbjct 7053257 CAGAGACTCATCTTTGCTGGGAAACAGCTTGAAGATGGTCGCACCCTTGCTGATTACAAC 7053198 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| ||||| || Sbjct 7053197 ATCCAAAAGGAGTCTAC 7053181 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || |||||||| ||||| || || ||| | || ||||| | Sbjct 7053149 ATGCAGATTTTTGTGAAGACCCTCACAGGAAAGACCATAACTTTGGAGGTTGAGAGTTCA 7053090 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | ||| | || | || || || || || | || ||||| || Sbjct 7053089 GACACAATCGATAATGTCAAAGCTAAGA-TTCAGGATAAGGAGGGGATCCCACCAGACCA 7053031 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || ||||| || || || | ||||| | | |||||||| Sbjct 7053030 GCAGAGACTCATCTTTGCTGGAAAACAGCTTGAGGATGGTCGCACACTTGCGGATTACAA 7052971 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| |||||||| || || Sbjct 7052970 CATCCAAAAAGAATCTAC 7052953 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || | || |||||||| || ||| | || ||||| | | Sbjct 7053605 ATGCAGATCTTTGTGAAGACGTTGACAGGAAAAACCATTACTTTGGAGGTTGAGAGCTCT 7053546 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| ||||| | || | || ||||| ||||| | || || ||||| Sbjct 7053545 GATACTATTGACAATGTTAAAGCTAAGA-TTCAGGACAAGGAAGGGATTCCTCCGGATCA 7053487 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || | || || | ||||| | | |||||||| Sbjct 7053486 GCAGAGGCTTATCTTTGCTGGTAAGCAGTTAGAGGATGGTCGCACACTTGCTGATTACAA 7053427 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||| ||||| || Sbjct 7053426 CATCCAAAAGGAGTCTAC 7053409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338006415632684