Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capsicum_20annuum_20[refseq_20GCF_5F000710875.1_202015-03-11]
1,627 sequences; 2,935,884,163 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq12 125 6e-24
seq9 120 2e-22
seq1308 116 3e-21
seq10 114 1e-20
seq8 107 2e-18
>seq12
Length=229934170
Score = 125 bits (138), Expect = 6e-24
Identities = 155/211 (73%), Gaps = 1/211 (0%)
Strand=Plus/Plus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| ||||||||||| ||| ||| | || || |
Sbjct 3077645 CAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGACCATCCTCGA 3077704
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || || ||||| ||||||| ||| ||||| || || | || ||||||||| ||
Sbjct 3077705 GCTGCTTACCTGCGAAAATCAACCTCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGAA 3077764
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || |||||| | | | ||||| ||| ||||| | |||||| |||||||
Sbjct 3077765 TCTTGGTCTTAACATTGTCGATGGTGTCCGATGACTCTACCTCTAAGGTAATAGTCTTGC 3077824
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
||||||| |||||||||||||| ||||| ||
Sbjct 3077825 CCGTCAGGGTCTTCACAAAGATCTGCATTTT 3077855
Score = 104 bits (114), Expect = 2e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||| ||||||||| ||||||||||| ||| || | || || || ||
Sbjct 3485394 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGTGTCCGGCCATCCTCGAGCTG 3485453
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || ||||| ||||||| ||| ||||| || || | || |||||||| ||| ||
Sbjct 3485454 CTTACCTGCGAAAATCAACCTCTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGAATCTT 3485513
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | |||| ||| ||||| | |||||| ||||| |||||
Sbjct 3485514 GGTCTTGACGTTGTCGATGGTGTCGGATGACTCTACCTCTAAGGTAATAGTCTTACCCGT 3485573
Query 45313 CAGAGTCTTCACAAAGATTTGCATGTT 45339
||| |||||||||||||| ||||| ||
Sbjct 3485574 CAGGGTCTTCACAAAGATCTGCATTTT 3485600
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|| || ||||| | || ||||| || || || ||||||||| ||||| ||||| | |
Sbjct 186924345 CCCCCCCTCAAACGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTC-TGC 186924403
Query 45170 A---GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGA 45226
| ||| | | || || |||||||| || || || ||||| ||||| || || ||
Sbjct 186924404 AAGAGTT--CTGCCATCCTCAAGTTGTTTACCAGCAAAAATCAAACGCTGCTGATCTGGG 186924461
Query 45227 GGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCC 45286
|| | ||||| ||||| || ||| || || | | | | || || |||
Sbjct 186924462 GGAATCCCCTCTTTGTCTTGGATCTTTGCTTTGACATTGTCAATGGTATCTGAACTCTCA 186924521
Query 45287 ACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||||| |||||||||||| || |||| |||||| ||||| ||||||||
Sbjct 186924522 ACCTCCAAGGTAATCGTCTTCCCAGTCAAAGTCTTAACAAAAATTTGCAT 186924571
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGT 45167
||||||||||| | || | |||| ||||| || ||| |||||||||||||||||
Sbjct 186924800 GCCACCTCTCAGAC-GAAGAACAAGATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCTG 186924858
Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
||| | | || || ||||| || || ||||| |||| ||||| ||||| ||||
Sbjct 186924859 CCAGGGTCCTTCCATCCTCAAGTTGCTTGCCAGCGAAGATCAGTCGCTGCTGGTCTGGAG 186924918
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | || ||||| ||| ||||||| ||| || | | | || || || |
Sbjct 186924919 GAATCCCTTCCTTATCCTGAATTTTTGCCTTCACGTTGTCAATTGTATCTGAACTTTCAA 186924978
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| || | |||||| |||||||| || || || || |||||||| |||||
Sbjct 186924979 CTTCAAGGGTAATGGTCTTGCCTGTAAGTGTTTTGACAAAGATCTGCAT 186925027
Score = 89.7 bits (98), Expect = 4e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
|||||| || ||||||||||| || || | || || || |||||||| || ||
Sbjct 186925292 CTCCTTTTGGATGTTGTAGTCAGCAAGAGTTCGTCCATCTTCAAGCTGTTTTCCAGCAAA 186925351
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|||| || ||| || || || || | |||||||| || || ||||||||| | ||
Sbjct 186925352 GATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTATCTTGAA-TTTTTGCTTTAACGT 186925410
Query 45265 CG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323
| | | | |||| || ||| ||||| | ||| || ||||| || || || ||||| |
Sbjct 186925411 TGTCAATGGTGTCAGAACTCTCGACCTCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTAA 186925470
Query 45324 CAAAGATTTGCAT 45336
||||||| |||||
Sbjct 186925471 CAAAGATCTGCAT 186925483
>seq9
Length=238794889
Score = 120 bits (132), Expect = 2e-22
Identities = 152/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| |||||||||||| || ||| | || || |
Sbjct 232793255 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTTCGACCATCCTCTA 232793196
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || ||||| || || ||||||| ||| ||||| ||||| | ||| ||||| ||| ||
Sbjct 232793195 GCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTATCCTGAA 232793136
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | ||||| || ||| ||||| | ||||| |||||||
Sbjct 232793135 TCTTAGCCTTGACATTATCGATAGTGTCCGAACTCTCAACCTCAAGAGTAATGGTCTTGC 232793076
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| || || ||||||||||||||||||||
Sbjct 232793075 CAGTGAGGGTCTTCACAAAGATTTGCAT 232793048
Score = 111 bits (122), Expect = 1e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| ||||||||||| || ||| | || || |
Sbjct 232658150 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCGACCATCCTCAA 232658091
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || ||||| || || ||||||| ||| ||||| ||||| | ||| ||||||||| ||
Sbjct 232658090 GCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCCTGAA 232658031
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | |||| || ||| || || | |||||| |||||||
Sbjct 232658030 TCTTAGCCTTGACATTATCGATAGTGTCTGAACTCTCAACTTCAAGGGTAATGGTCTTGC 232657971
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| || || ||||| ||||||||||||||
Sbjct 232657970 CAGTGAGGGTCTTTACAAAGATTTGCAT 232657943
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| |||| | || || | ||| || ||| |||||| || |||||||||||| |
Sbjct 232793502 CCACCCCTCAGCCGCAAAACGAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCC 232793443
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
||| || | || || || || ||||| || || ||||||| ||| || || |||||
Sbjct 232793442 AGTGTTCGTCCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGAGGG 232793383
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| || ||||||||| || ||| |||||| | | | | || | || |||
Sbjct 232793382 ATGCCTTCCTTGTCCTGGATCTTTGCCTTAACATTATCAATGGTATCAGAGCTTTCGACC 232793323
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| | ||| || ||||| || || | ||||| || ||||| ||||||
Sbjct 232793322 TCAAGGGTGATGGTCTTTCCGGTTAAGGTCTTAACGAAGATCTGCATG 232793275
>seq1308
Length=1742971
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||| || ||||| ||||||||| ||||||||||| || || |||| ||
Sbjct 184279 ACCAAATGGAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTTCGGCCGTCTTCG 184220
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
||||| ||||||||||| ||||||| ||| ||||| || || | |||||||| || |
Sbjct 184219 AGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATTCCCTCCTTATCTTGA 184160
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | |||||||||| ||| || |||||
Sbjct 184159 ATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTTTCCACCTCCAAGGTGATGGTCTTT 184100
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || ||||| ||||||||||| |||||
Sbjct 184099 CCGGTGAGAGTTTTCACAAAGATCTGCAT 184071
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||| |||||||| || || ||| |||| |||
Sbjct 184507 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGCTAGAGTACGACCGTCCTCC 184448
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || ||||||||||| ||||||| ||| ||||| || || | |||||||| || |
Sbjct 184447 AACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATTCCCTCCTTATCTTGA 184388
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | |||||| |||| ||||| ||||||
Sbjct 184387 ATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCCACTTCCAAAGTAATGGTCTTG 184328
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || ||||| || || ||||||||
Sbjct 184327 CCTGTGAGGGTCTTAACGAAAATTTGCAT 184299
>seq10
Length=205736368
Score = 114 bits (126), Expect = 1e-20
Identities = 151/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| ||||||||||| || ||| | || || |
Sbjct 149589642 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCGACCATCCTCAA 149589701
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || ||||| || || ||||||| ||| ||||| ||||| | ||| ||||||||| ||
Sbjct 149589702 GCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCCTGAA 149589761
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | ||||| || ||| || || | |||||| |||||||
Sbjct 149589762 TCTTAGCCTTGACATTATCGATAGTGTCCGAACTCTCAACTTCAAGGGTAATGGTCTTGC 149589821
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| || || ||||| ||||||||||||||
Sbjct 149589822 CAGTGAGGGTCTTTACAAAGATTTGCAT 149589849
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||| | | | || | ||| || ||| ||||||||| |||||||||||
Sbjct 149571369 CCACCTCTAAGCCGAAGAACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 149571428
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || || || || ||||| || || ||||||| ||| ||||| |||||
Sbjct 149571429 AGAGTTCGACCATCCTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGG 149571488
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||| ||||| ||| ||| || ||| || | | ||||| || ||| |||
Sbjct 149571489 ATACCTTCCTTATCCTGAATCTTAGCCTTGACATTATCGATAGTGTCCGAACTCTCAACC 149571548
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | ||||| ||||| || || || ||||||||||||||||||||
Sbjct 149571549 TCAAGTGTAATGGTCTTACCAGTGAGGGTCTTCACAAAGATTTGCAT 149571595
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||| | | |||| || || || ||||||||||| ||||||||
Sbjct 187644691 CCACCTCTCAGCCGCAGCACCAGATGGAGGGTTGATTCCTTCTGAATATTGTAGTCAGCA 187644750
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || || ||||| ||||| || || ||||||| || || || |||||
Sbjct 187644751 AGGGTACGACCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCTTTGCTGATCTGGAGGA 187644810
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| |||||||||||| ||||||| |||||| | | |||| | ||| |||
Sbjct 187644811 ATGCCCTCCTTGTCCTGAATTTTTGCCTTAACATTGTCAATAGTGTCTGAGCTCTCAACC 187644870
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| | |||||| ||||| || |||| || ||||||||||| ||||||
Sbjct 187644871 TCAAGGGTAATAGTCTTTCCAGTCAAGGTTTTCACAAAGATCTGCATG 187644918
Score = 102 bits (112), Expect = 6e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
||||| ||||| ||||| ||| |||| | | || |||| || || ||||| ||
Sbjct 338931 TCCTTTTGAATATTGTAATCGGCCAGTGTCCTTCCATCTTCCAACTGCTTACCGGCAAAA 338990
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
||||||| || ||||| || || | |||||| |||||| ||| || ||| ||
Sbjct 338991 ATCAACCTTTGCTGGTCCGGTGGGATACCCTCTTTGTCCTGAATCTTGGCCTTCACGTTG 339050
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | | |||| | |||||||| | |||||| |||||||| |||| |||||||||
Sbjct 339051 TCGATGGTGTCAGAGCTTTCCACCTCAAGGGTAATGGTCTTGCCAGTCAAAGTCTTCACG 339110
Query 45326 AAGATTTGCAT 45336
|||||||||||
Sbjct 339111 AAGATTTGCAT 339121
Score = 102 bits (112), Expect = 6e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
|| ||||||||||| || || || |||| | || ||||| || || || || ||
Sbjct 187644043 TCTTTCTGAATGTTATAATCAGCAAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAA 187644102
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
|||| || ||| ||||| || || | ||||||||| ||| ||| || ||| ||
Sbjct 187644103 ATCAGCCTCTGCTGGTCTGGCGGGATACCCTCCTTATCCTGAATCTTAGCCTTCACATTG 187644162
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | | | || | ||||||||||| ||| |||||||| || ||||| ||||| |||
Sbjct 187644163 TCAATGGTATCTGAGCTCTCCACCTCCAAGGTGATCGTCTTCCCAGTCAGCGTCTTGACA 187644222
Query 45326 AAGATTTGCAT 45336
|||||||||||
Sbjct 187644223 AAGATTTGCAT 187644233
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||| |||||||| || || ||| |||| ||
Sbjct 339141 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGGCCGTCCTCG 339200
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||| || || ||||| | || || || || || | || |||||||||
Sbjct 339201 AGCTGCTTTCCAGCAAAGATCAATCTTTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGG 339260
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | |||| || |||||||| | ||| ||||||||
Sbjct 339261 ATCTTGGCCTTGACGTTGTCAATAGTGTCTGAACTTTCCACCTCGAGGGTGATCGTCTTC 339320
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || |||||||||||||| |||||
Sbjct 339321 CCGGTGAGGGTCTTCACAAAGATCTGCAT 339349
Score = 86.0 bits (94), Expect = 5e-12
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||| |||||| || ||||||||||| || | | || |||| ||
Sbjct 187644942 GTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCCAACTG 187645001
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
||||| ||||| ||||| | ||||||||| ||||| | || ||||| || |||||
Sbjct 187645002 CTTTCCAGCGAAGATCAATCTCTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGGATTTT 187645061
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
| ||| || | | |||| | ||| ||||| | ||||| ||||| || ||
Sbjct 187645062 TGCCTTGACATTGTCAATAGTGTCAGAGCTCTCAACCTCAAGAGTAATTGTCTTCCCAGT 187645121
Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337
|| ||| ||||||||||| ||||||
Sbjct 187645122 CAAAGTTTTCACAAAGATCTGCATG 187645146
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||| || ||||| ||| || || |||| ||
Sbjct 339597 ACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGCTAGGGTACGGCCGTCATCA 339656
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || |||||||| || ||||| | || ||||| || || | || |||||||||
Sbjct 339657 AGCTGCTTTCCGGCAAAGATCAATCTTTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGG 339716
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | |||||||| | ||| || |||||
Sbjct 339717 ATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTT 339776
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || ||||||||||| |||||
Sbjct 339777 CCGGTAAGGGTTTTCACAAAGATCTGCAT 339805
Score = 84.2 bits (92), Expect = 2e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 45176 CGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCC 45235
||| | || ||||| || || || || || ||||||| ||| ||||| || || | |||
Sbjct 149570979 CGACCATCCTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGTGGAATACCT 149571038
Query 45236 TCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACG 45295
||||||||| ||| ||| || || | | | | ||| | |||||||||||
Sbjct 149571039 TCCTTGTCCTGAATCTTTGCTTTCACGTTATCAATGGTATCCGAGCTCTCCACCTCCAAA 149571098
Query 45296 GTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| |||||||| || || |||||||| || || || |||||
Sbjct 149571099 GTGATCGTCTTCCCGGTTAGAGTCTTGACGAATATCTGCAT 149571139
>seq8
Length=153299543
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
||||||||||| || ||| |||||||| |||||||| || ||| || | ||
Sbjct 133642580 AATACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCCAGGGTACGGCCATCT 133642639
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|||| ||| || || || || |||| || || ||||| || || | |||||||||||||
Sbjct 133642640 TCCAATTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGCGGGATACCCTCCTTGTCC 133642699
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
|||||| |||||| | | | |||| | |||||||| | ||| | |||
Sbjct 133642700 TGAATTTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGACTGTC 133642759
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || |||||||||||||| |||||
Sbjct 133642760 TTCCCAGTGAGGGTCTTCACAAAGATCTGCAT 133642791
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--TTCAGTTGGCGATCGTCGT 45185
|||||||| || ||| ||||||||||||||||| ||| | ||| || |||| |
Sbjct 133642811 ACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCGGCTAAAGTA--CGGCCGTCAT 133642868
Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245
| || || |||||||| || ||||| | || || || || || | || |||||||||
Sbjct 133642869 CAAGCTGCTTTCCGGCAAAGATCAATCTTTGCTGATCTGGTGGAATTCCTTCCTTGTCCT 133642928
Query 45246 CAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305
|| || |||||| | | | |||| | |||||||| | ||| || ||||
Sbjct 133642929 GGATCTTAGCCTTAACGTTATCAATGGTGTCTGAGCTTTCCACCTCGAGGGTGATGGTCT 133642988
Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| || ||||| || ||||||||||| |||||
Sbjct 133642989 TTCCGGTCAGGGTTTTCACAAAGATCTGCAT 133643019
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
||||||||||| ||||| ||| |||| || | || |||| || || || || ||
Sbjct 133641917 TCCTTCTGAATATTGTAATCGGCCAGTGTCCGTCCATCTTCCAACTGCTTACCAGCAAAA 133641976
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
||||||| || || || || || | ||||| |||||| ||| || ||||||
Sbjct 133641977 ATCAACCTTTGCTGATCTGGTGGGATGCCCTCTTTGTCCTGAATCTTGGCCTTAACGTTG 133642036
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | |||| | |||||||| | |||||| |||||||| |||| ||| |||||
Sbjct 133642037 TCGATTGTGTCGGAGCTTTCCACCTCAAGGGTAATGGTCTTGCCAGTCAAAGTTTTCACG 133642096
Query 45326 AAGATTTGCAT 45336
|||| ||||||
Sbjct 133642097 AAGACTTGCAT 133642107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395067366029167
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |