Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsicum_20annuum_20[refseq_20GCF_5F000710875.1_202015-03-11] 1,627 sequences; 2,935,884,163 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 5e-11 >seq3 Length=261510930 Score = 84.2 bits (92), Expect = 5e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 68691 AGAGATTGGGGATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGAT 68750 || |||||||| | ||| |||||| ||||||||||||||| |||||||||| || ||| Sbjct 9092708 AGGGATTGGGGCTTTGCTGGGGATTATGTAGAAGCAATGTGGATGATGCTGCAGCAGGAT 9092767 Query 68751 ACTCCGGATGACTATGTGATTGCAAC 68776 | |||||||| |||||| | || || Sbjct 9092768 AAGCCGGATGATTATGTGGTGGCTAC 9092793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102857009432450