Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsicum_20annuum_20[refseq_20GCF_5F000710875.1_202015-03-11] 1,627 sequences; 2,935,884,163 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq9 109 6e-19 seq10 107 2e-18 seq12 104 3e-17 seq1308 100 3e-16 seq8 100 3e-16 seq5 100 3e-16 seq3 93.3 5e-14 >seq9 Length=238794889 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || || |||| |||||| || | ||| |||||| || |||||||||||||| Sbjct 232793731 ACCTCCCCTCAATCGCAGCACCAAGTGTAGCGTGGACTCCTTCTGGATATTGTAATCAGC 232793672 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | | || || |||||||||||||| || || | ||||||||| || | ||| Sbjct 232793671 AAGGGTCCTCCCATCCTCGAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGG 232793612 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | |||||| || ||| || || | | | | || || ||| || Sbjct 232793611 AATCCCCTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATTGTATCAGAACTTTCGAC 232793552 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| ||||| || | ||||| |||||||| ||||| Sbjct 232793551 CTCCAAGGTGATGGTCTTGCCTGTCAATGTCTTGACAAAGATCTGCAT 232793504 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || || |||| ||||||||| | ||| |||||| || |||||||||||||| Sbjct 232658398 ACCTCCCCTCAATCGCAGCACCAAATGTAGCGTGGACTCCTTCTGGATATTGTAATCAGC 232658339 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||| | | || || || ||||||||||| || || | ||||||||| || | ||| Sbjct 232658338 AAGGCTCCTCCCATCCTCGAGTTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGG 232658279 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | | ||| || || ||| || || | | | | || || ||| || Sbjct 232658278 AATCCCCTCTTTATCTTGGATCTTCGCCTTCACATTATCAATTGTATCAGAACTC---TC 232658222 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||||||||| || || | ||||| |||||||| ||||| Sbjct 232658221 GACCTCCAAGGTGATGGTTTTCCCTGTCAATGTCTTGACAAAGATCTGCAT 232658171 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||| ||||| || | || || |||||||| ||||| || Sbjct 232658134 CTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCGACCATCCTCAAGCTGCTTTCCAGCAAA 232658075 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 42135 || | | ||||||||| | || | | ||||||||| ||| | || | |||| Sbjct 232658074 GATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCC-TGAATCTTAGCCTTGACAT 232658016 Query 42136 TCGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| ||| || || || | || ||||| ||||| || || |||| Sbjct 232658015 TATCGATAGTGTCTGAACTC---TCAACTTCAAGGGTAATGGTCTTGCCAGTGAGGGTCT 232657959 Query 42193 TTACAAAGATTTGCAT 42208 |||||||||||||||| Sbjct 232657958 TTACAAAGATTTGCAT 232657943 >seq10 Length=205736368 Score = 107 bits (118), Expect = 2e-18 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || || |||| |||||| || | ||| |||||| || |||||||||||||| Sbjct 149571140 ACCTCCCCTCAATCGCAGCACCAAGTGTAGCGTGGACTCCTTCTGGATATTGTAATCAGC 149571199 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | | || || |||||||||||||| || || | ||||||||| || | ||| Sbjct 149571200 AAGGGTCCTCCCATCCTCGAGCTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGG 149571259 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | | |||||| || ||| || || | | | | || || ||| || Sbjct 149571260 AATCCCCTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATTGTATCAGAACTC---TC 149571316 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||||||||| || || | ||||| |||||||| ||||| Sbjct 149571317 GACTTCCAAGGTGATGGTTTTCCCAGTCAATGTCTTGACAAAGATCTGCAT 149571367 Score = 105 bits (116), Expect = 7e-18 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| ||||| | ||||||||| | |||| ||| || || || ||||||||||| Sbjct 187644235 CCTCCTCTCAAACGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTGTAATCAGCA 187644294 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||||| | | || || |||||||| ||||| || || | ||||||||||| | ||| Sbjct 187644295 AGAGTCCTCCCATCCTCAAGCTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGTGGA 187644354 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | | || ||||| ||| ||| ||| | | | | ||||| ||| || Sbjct 187644355 ATCCCTTCTTTGTCTTGGATCTTTGCTTTCACATTATCGATGGTGTCTGAACTC---TCA 187644411 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | |||||||| || || || | ||||| || || || ||||| Sbjct 187644412 ACCTCCAAGGTGATGGTCTTTCCAGTCAATGTCTTAACGAAAATCTGCAT 187644461 Score = 102 bits (112), Expect = 9e-17 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || || |||| ||||||||| | ||| |||||| || |||||||||||||| Sbjct 149589394 ACCTCCCCTCAATCGCAGCACCAAATGTAGCGTGGACTCCTTCTGGATATTGTAATCAGC 149589453 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | | || || || ||||||||||| || || | ||||||||| || | ||| Sbjct 149589454 AAGGGTCCTCCCATCCTCGAGTTGCTTACCAGCAAAGATCAATCGCTGCTGATCTGGTGG 149589513 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | | ||| || || ||| || || | | | | || || ||| || Sbjct 149589514 AATCCCCTCTTTATCTTGGATCTTCGCCTTCACATTATCAATTGTATCAGAACTC---TC 149589570 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||||||||| || || | ||||| |||||||| ||||| Sbjct 149589571 GACCTCCAAGGTGATGGTTTTCCCTGTCAATGTCTTGACAAAGATCTGCAT 149589621 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| || | || |||||| || ||||||||||| || || || || | Sbjct 339590 ACGGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGCTAGGGTACGGCC 339649 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 |||||| |||||||| || || || || | || |||||||| | || | || ||||| Sbjct 339650 GTCATCAAGCTGCTTTCCGGCAAAGATCAATCTTTGCTGGTCTGGGGGGATGCCTTCCTT 339709 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| || || | ||| | | | |||||| |||||| |||| |||| Sbjct 339710 GTCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCGGAGCTTTCCACCTCGAGGGTGA 339768 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || || || || || |||||||| ||||| Sbjct 339769 TGGTCTTTCCGGTAAGGGTTTTCACAAAGATCTGCAT 339805 Score = 93.3 bits (102), Expect = 5e-14 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || | | |||||| | ||| | || |||||||||||||||||||| || Sbjct 338894 ACCTCCCCTGAGCCTCAACACAAGATGAAGGGTCGATTCCTTTTGAATATTGTAATCGGC 338953 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||| |||| | || || | ||||||||| || || || | | |||||||| | ||| Sbjct 338954 CAGTGTCCTTCCATCTTCCAACTGCTTACCGGCAAAAATCAACCTTTGCTGGTCCGGTGG 339013 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | ||| |||||| ||| | || | | ||| | | | ||||| ||| || Sbjct 339014 GATACCCTCTTTGTCC-TGAATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGCT---TT 339069 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || | || ||||| ||||| || | ||||| || ||||||||||| Sbjct 339070 CCACCTCAAGGGTAATGGTCTTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 339121 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||||||||| || || || |||| || |||||||| ||||| || Sbjct 339158 CTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCAAA 339217 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | || ||||| || | || | | ||||||||| ||| || |||| ||| Sbjct 339218 GATCAATCTTTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 339276 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| |||||| |||| ||||| || || || || || ||||| | Sbjct 339277 TGTCAATAGTGTCTGAACTTTCCACCTCGAGGGTGATCGTCTTCCCGGTGAGGGTCTTCA 339336 Query 42196 CAAAGATTTGCAT 42208 ||||||| ||||| Sbjct 339337 CAAAGATCTGCAT 339349 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||| ||||| || | || || |||||||| ||||| || Sbjct 149589658 CTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCGACCATCCTCAAGCTGCTTTCCAGCAAA 149589717 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 42135 || | | ||||||||| | || | | ||||||||| ||| | || | |||| Sbjct 149589718 GATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCC-TGAATCTTAGCCTTGACAT 149589776 Query 42136 TCGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| ||| || || || | || ||||| ||||| || || |||| Sbjct 149589777 TATCGATAGTGTCCGAACTC---TCAACTTCAAGGGTAATGGTCTTGCCAGTGAGGGTCT 149589833 Query 42193 TTACAAAGATTTGCAT 42208 |||||||||||||||| Sbjct 149589834 TTACAAAGATTTGCAT 149589849 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| || | || |||||| || || ||||||||||| || || || | Sbjct 339362 ACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTACGGCC 339421 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || |||||||| || || || || | | |||||||| | || | || ||||| Sbjct 339422 GTCCTCGAGCTGCTTGCCTGCAAAGATCAACCTTTGCTGGTCTGGGGGGATGCCTTCCTT 339481 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| ||| || |||| ||| | | | ||||| ||| ||| || |||| || Sbjct 339482 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATAGTGTCAGAGCT---TTCAACCTCGAGCG 339537 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || || || | ||||| || ||||| ||||| Sbjct 339538 TGATTGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 339577 >seq12 Length=229934170 Score = 104 bits (114), Expect = 3e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||| || || || | || || ||||||||||| ||||| Sbjct 3077661 CTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGACCATCCTCGAGCTGCTTACCTGCGAA 3077720 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | | ||||||||| | ||| | || ||||||||| ||| | || || | | | | Sbjct 3077721 AATCAACCTCTGCTGGTCTGGTGGAATGCCTTCCTTGTCC-TGAATCTTGGTCTTAACAT 3077779 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || || || || | || || || |||||||| || ||||| | Sbjct 3077780 TGTCGATGGTGTCCGATGACTCTACCTCTAAGGTAATAGTCTTGCCCGTCAGGGTCTTCA 3077839 Query 42196 CAAAGATTTGCATTTT 42211 ||||||| |||||||| Sbjct 3077840 CAAAGATCTGCATTTT 3077855 Score = 102 bits (112), Expect = 9e-17 Identities = 144/197 (73%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||| || ||||| | || || ||||||||||| ||||| Sbjct 3485406 CTCCTTCTGGATGTTGTAGTCAGCTAGTGTCCGGCCATCCTCGAGCTGCTTACCTGCGAA 3485465 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 42135 || | | ||||||||| | || | || ||||||| | ||| | || || |||| || Sbjct 3485466 AATCAACCTCTGCTGGTCCGGCGGGATGCCTTCCTTGT-CTTGAATCTTGGTCTTGA-CG 3485523 Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | | | |||||| || || || || | || || || || ||||| || ||||| Sbjct 3485524 TTGTCGATGGTGTCGGATGACTCTACCTCTAAGGTAATAGTCTTACCCGTCAGGGTCTTC 3485583 Query 42195 ACAAAGATTTGCATTTT 42211 |||||||| |||||||| Sbjct 3485584 ACAAAGATCTGCATTTT 3485600 Score = 93.3 bits (102), Expect = 5e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | ||| | || | ||||| || ||| || ||||| ||||| || ||| Sbjct 186924801 CCACCTCTCAGACGAAGAACAAGATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCTGCC 186924860 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || |||| | || || || ||||| |||||||| || |||||||||||||| | || Sbjct 186924861 AGGGTCCTTCCATCCTCAAGTTGCTTGCCAGCGAAGATCAGTCGCTGCTGGTCTGGAGGA 186924920 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA--TTCCA 42159 | | ||||| ||| ||| |||||| | ||| | || ||| || | ||| | Sbjct 186924921 ATCCCTTCCTTATCC-TGAATTTTTGCCTTCACGTTGTCA-ATTGTATCTGAACTTTCAA 186924978 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | || ||||| ||||| || || || || |||||||| ||||| Sbjct 186924979 CTTCAAGGGTAATGGTCTTGCCTGTAAGTGTTTTGACAAAGATCTGCAT 186925027 >seq1308 Length=1742971 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065 |||| ||| |||||| || |||||||| ||||||| |||| | || || |||||| Sbjct 185413 TGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGCCAAGGTCCTTCCATCCTCCAGCTGC 185354 Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125 |||||||| || || | | ||||||||| | ||| | | |||||||||| ||| | || Sbjct 185353 TTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGAATTCCCTCCTTGTCC-TGAATCTT 185295 Query 42126 TG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 | || | | | | |||||| |||||| |||| |||||||| || ||||| Sbjct 185294 AGCCTTCACATTGTCAATTGTGTCGGAGCTTTCCACCTCGAGAGTGATGGTCTTTCCCGT 185235 Query 42185 TAGCGTCTTTACAAAGATTTGCAT 42208 || ||||| || || || ||||| Sbjct 185234 GAGGGTCTTGACGAAAATCTGCAT 185211 Score = 86.0 bits (94), Expect = 7e-12 Identities = 142/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 || |||||||| || || ||||| || || || || || | || ||||||||||| || Sbjct 184723 GTACTCTCCTTCTGGATGTTGTAGTCCGCGAGGGTACGGCCATCTTCTAGCTGCTTTCCG 184664 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 42131 || ||||| || | ||||||||| | || | || |||||| ||| ||| || ||| Sbjct 184663 GCAAATATAAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTG 184604 Query 42132 AGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 42187 | ||| | | | || || ||| |||||| || | || ||||| || || || || Sbjct 184603 A-CGTTGTCTATGGTATCTGAGCT---TTCCACCTCCAAAGTAATGGTCTTCCCTGTGAG 184548 Query 42188 CGTCTTTACAAAGATTTGCAT 42208 ||||| ||||| || ||||| Sbjct 184547 GGTCTTAACAAAAATCTGCAT 184527 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| || | || |||||| || || ||||||||||| ||||| || | Sbjct 184514 ACGGAGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGCTAGAGTACGACC 184455 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || | |||||| || ||||| || | | ||||||||| | || | | |||||| Sbjct 184454 GTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATTCCCTCCTT 184395 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 42168 | | ||| | || | |||| | | | ||||| |||| ||||| || | | Sbjct 184394 AT-CTTGAATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTC---TCCACTTCCAAAG 184339 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | ||||| ||||| || || ||||| || || |||||||| Sbjct 184338 TAATGGTCTTGCCTGTGAGGGTCTTAACGAAAATTTGCAT 184299 >seq8 Length=153299543 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| |||| | |||||| | ||| | || ||||| |||||||||||||| || Sbjct 133641880 ACCTCCCCTTAGCCTCAACACAAGATGAAGGGTCGATTCCTTCTGAATATTGTAATCGGC 133641939 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||| ||||| | || || | |||||||||||| || || | | ||||| || | ||| Sbjct 133641940 CAGTGTCCGTCCATCTTCCAACTGCTTACCAGCAAAAATCAACCTTTGCTGATCTGGTGG 133641999 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | || ||| |||||| ||| | || | | | ||| | | | |||||| ||||| Sbjct 133642000 GATGCCCTCTTTGTCC-TGAATCTTGGCCTTAACGTTGTCGATTGTGTCGGAGCTTTCCA 133642058 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | || ||||| ||||| || | || || || |||| |||||| Sbjct 133642059 CCTCAAGGGTAATGGTCTTGCCAGTCAAAGTTTTCACGAAGACTTGCAT 133642107 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||| ||||| || | ||| ||||| || || |||||||||||||| || || | Sbjct 133642576 ACGCAATACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCCAGGGTACGGCC 133642635 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | ||||||||||| || || || | |||||||| | || | | |||||| Sbjct 133642636 ATCTTCCAATTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGCGGGATACCCTCCTT 133642695 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| |||| | | | ||| | | | |||||| |||||| || | |||| Sbjct 133642696 GTCC-TGAATTTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGA 133642754 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || || ||||| |||||||| ||||| Sbjct 133642755 CTGTCTTCCCAGTGAGGGTCTTCACAAAGATCTGCAT 133642791 Score = 93.3 bits (102), Expect = 5e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| |||||| || || ||||||||||| || || || |||| || Sbjct 133642127 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGGCCGTCCTCA 133642186 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| |||||||| || | || |||||||| | || | | ||||||||| | Sbjct 133642187 AGCTGCTTTCCAGCGAAGATCAATCTTTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGG 133642246 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 || || |||| | | | |||||| ||| || |||| ||||| || || Sbjct 133642247 ATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTTTCAACCTCGAGGGTGATTGTCTTT 133642306 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| ||||| || || |||||||| Sbjct 133642307 CCAGTTAAAGTCTTCACGAAAATTTGCAT 133642335 >seq5 Length=217274494 Score = 100 bits (110), Expect = 3e-16 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 42021 TTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATG 42080 ||||| ||||| || || ||||| || || | || || |||||||||||||| ||||| Sbjct 129771664 TTTTGGATATTATAGTCTGCCAGCGTACGGCCATCTTCAAGCTGCTTACCAGCAAATATC 129771723 Query 42081 AGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGC 42139 | ||||||||||| | || | || ||||| ||| ||| | || | |||| | | Sbjct 129771724 AAACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCC-TGAATCTTAGCCTTGACATTGTC 129771782 Query 42140 CACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAA 42199 | || ||||| ||||| || || | || ||||| || || ||||| || || || || Sbjct 129771783 AATGGTATCGCTGGATTCAACCTCAATGGTTATGGTCTTCCCTGTTAGGGTTTTCACGAA 129771842 Query 42200 GATTTGCAT 42208 ||||||||| Sbjct 129771843 GATTTGCAT 129771851 >seq3 Length=261510930 Score = 93.3 bits (102), Expect = 5e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | | ||| ||||| || | ||| || |||||||||||||||||||| Sbjct 37145359 CCTCCTCTGAGCCTCAAAACCAAGTGAAGTGTTGATTCTTTTTGAATATTGTAATCAGCT 37145418 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || | || || | ||| || ||| | || || |||| | |||||| || Sbjct 37145419 AGAGTTCGGCCATCTTCCAACTGTTTGCCACCAAAAATTAGTCTTTACTGGTCACGCGGT 37145478 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || |||||| ||| |||| | |||| | | | |||||||| ||| || Sbjct 37145479 ATTCCGTCTTTGTCC-TGAATTTTGGCCTTGACATTGTCGATTGTGTCGCTACTTTCGAC 37145537 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | || ||||| || || ||||| ||||| || ||||| ||||| Sbjct 37145538 TTCAAGGGTAATGGTCTTCCCGGTTAGAGTCTTGACGAAGATCTGCAT 37145585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543201752409680