Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsicum_20annuum_20[refseq_20GCF_5F000710875.1_202015-03-11] 1,627 sequences; 2,935,884,163 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq12 156 3e-33 seq10 129 4e-25 seq8 122 5e-23 seq1308 118 7e-22 seq9 87.8 1e-12 >seq12 Length=229934170 Score = 156 bits (172), Expect = 3e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || | ||||||||||||||||||||| |||||| || |||||||| |||| | Sbjct 186924345 CCCCCCCTCAAACGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCA 186924404 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | || |||||||||||||| ||||| || |||||||| || || || || Sbjct 186924405 AGAGTTCTGCCATCCTCAAGTTGTTTACCAGCAAAAATCAAACGCTGCTGATCTGGGGGA 186924464 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| |||||| |||| |||| ||| || | ||| || ||| ||||| || Sbjct 186924465 ATCCCCTCTTTGTCTTGGATC-TTTGCTTTGACATTGTCAATGGTATCTGAACTCTCAAC 186924523 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| ||||| || || || || || || |||||||| ||||| Sbjct 186924524 CTCCAAGGTAATCGTCTTCCCAGTCAAAGTCTTAACAAAAATTTGCAT 186924571 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || | ||| | ||||||||| || || ||||| |||||||| ||||||| Sbjct 117694242 GCCACCCCTCAAACGAAGCACCAAATGAAGGGTTGATTCCTTCTGAATGTTGTAATCTGC 117694183 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || | | |||||||||||||| || ||||| || || | ||| ||||| || || Sbjct 117694182 AAGGGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAGATCAATCTCTGCTGGTCTGGAGG 117694123 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | | |||||||||| ||| ||| | | || | ||| || || |||||| | Sbjct 117694122 AATCCTCTCCTTGTCTTGGAT-TTTCGCCATGACATTGTCAATAGTATCAAAGCTCTCGA 117694064 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | ||| || || || || || | || |||||||| |||||||| Sbjct 117694063 CTTCAAGGGTGATGGTCTTGCCAGTAAGAGTCTTCACAAAGATCTGCAT 117694015 Score = 102 bits (112), Expect = 5e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 ||||||||| ||||| || || | |||||||| | |||||||| ||||| || ||||| Sbjct 186925064 CTCCTTTTGGATGTTGTAGTCAGCAAGTGTTCTACCATCTTCAAGCTGTTTTCCAGCAAA 186925123 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | | ||| || || || | | |||||||||||| ||| ||| | ||| || Sbjct 186925124 GATCAGCCTCTGCTGATCAGGTGAAATGCCCTCCTTGTCT-TGAATTTTAGCTTTGACAT 186925182 Query 34635 TA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 || ||| |||||| |||||| || || | ||||| || || ||||| | ||||| | Sbjct 186925183 TATCAATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAGTCTTTCCGGTCAGAGTTTTAA 186925242 Query 34694 CAAAAATCTGCAT 34706 | || || ||||| Sbjct 186925243 CGAATATTTGCAT 186925255 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||||||||| | || | || || || || || |||||||| ||||| | Sbjct 186924573 CCACCTCTAAGACGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCCGCC 186924632 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || | | || |||||||| || || ||||| ||||| | ||| ||||| || || Sbjct 186924633 AAGGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATTAATCTCTGCTGGTCTGGAGGA 186924692 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| |||| |||| |||||| || || || ||| ||||| || Sbjct 186924693 ATACCTTCCTTGTCTTGGATC-TTTGCTTTAACATTATCGATGGTATCTGAACTCTCAAC 186924751 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| || || || || ||||| || || || ||||| || |||||| Sbjct 186924752 CTCCAGAGTGATTGTCTTCCCGGTCAATGTCTTGACAAATATTTGCATG 186924800 Score = 91.5 bits (100), Expect = 9e-14 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||||||| |||||| || ||||| || || | ||||| || | || || || || Sbjct 3485395 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGTGTCCGGCCATCCTCGAGCTGC 3485454 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||| || || || || | ||| ||||||||||| | || ||||||||| ||| || Sbjct 3485455 TTACCTGCGAAAATCAACCTCTGCTGGTCCGGCGGGATGCCTTCCTTGTCT-TGAATCTT 3485513 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || || ||| | || ||||| ||| || || | ||| || || ||||| || Sbjct 3485514 GGTCTTGACGTTGTCGATGGTGTCGGATGACTCTACCTCTAAGGTAATAGTCTTACCCGT 3485573 Query 34683 TAACGTTTTCACAAAAATCTGCATGTT 34709 | || |||||||| |||||||| || Sbjct 3485574 CAGGGTCTTCACAAAGATCTGCATTTT 3485600 >seq10 Length=205736368 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | ||| | |||||||||||| ||| ||| || || ||||| ||||| | | Sbjct 187644235 CCTCCTCTCAAACGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTGTAATCAGCA 187644294 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || | | | || ||||| || || || ||||| || |||||||| ||||| || || Sbjct 187644295 AGAGTCCTCCCATCCTCAAGCTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGTGGA 187644354 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| |||| |||| ||| || || || |||||| ||||| || Sbjct 187644355 ATCCCTTCTTTGTCTTGGATC-TTTGCTTTCACATTATCGATGGTGTCTGAACTCTCAAC 187644413 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || || || || || || || || ||||||||||| Sbjct 187644414 CTCCAAGGTGATGGTCTTTCCAGTCAATGTCTTAACGAAAATCTGCAT 187644461 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || |||| ||||| |||||| || ||||| ||||| || || || | | Sbjct 187644691 CCACCTCTCAGCCGCAGCACCAGATGGAGGGTTGATTCCTTCTGAATATTGTAGTCAGCA 187644750 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || || ||||| || || ||||| || || | || || || || || Sbjct 187644751 AGGGTACGACCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCTTTGCTGATCTGGAGGA 187644810 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| ||| ||||| ||||| | ||| |||||| |||||| || Sbjct 187644811 ATGCCCTCCTTGTC-CTGAATTTTTGCCTTAACATTGTCAATAGTGTCTGAGCTCTCAAC 187644869 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | ||| || || || || || || ||||||||||| ||||||||| Sbjct 187644870 CTCAAGGGTAATAGTCTTTCCAGTCAAGGTTTTCACAAAGATCTGCATG 187644918 Score = 104 bits (114), Expect = 1e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || || || |||||| || || || ||||| | || || || Sbjct 339588 AGACGGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAATCGGCTAGGGTACGG 339647 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || || |||||||| || || | || ||||| || || | || ||| Sbjct 339648 CCGTCATCAAGCTGCTTTCCGGCAAAGATCAATCTTTGCTGGTCTGGGGGGATGCCTTCC 339707 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||||| | || ||| | ||| ||||| ||| ||||| || | ||| Sbjct 339708 TTGTCCTGGATCTTG-GCCTTCACGTTGTCAATGGTGTCGGAGCTTTCCACCTCGAGGGT 339766 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | ||||||||||| |||||||| Sbjct 339767 GATGGTCTTTCCGGTAAGGGTTTTCACAAAGATCTGCAT 339805 Score = 102 bits (112), Expect = 5e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || || ||| ||||||||| || || || || | ||| |||| | || || | ||| Sbjct 187645171 TGAAGGGTGGACTCCTTTTGGATATTGTAGTCAGCAAGAGTTCTACCATCCTCCAACTGT 187645230 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || || | |||||| || || || | ||| ||||| ||| ||| ||| Sbjct 187645231 TTCCCGGCGAAGATCAATCTCTGTTGATCTGGAGGAATTCCTTCCTTATCTTGGAT-TTT 187645289 Query 34624 TGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | ||| ||| || ||| ||||| |||||| || || | || || || || || || Sbjct 187645290 AGCTTTGACGTTATCAATAGTGTCAGAGCTCTCAACCTCAAGAGTAATTGTCTTCCCCGT 187645349 Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707 || ||||||||||| ||||||||| Sbjct 187645350 CAATGTTTTCACAAAGATCTGCATG 187645374 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 || || || ||||||||||| | ||| || || | || || || || ||||| ||||| Sbjct 149570949 TCTTTCTGGATGTTATAATCAGCAAGCGTACGACCATCCTCCAGCTGCTTACCAGCAAAA 149571008 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || || | ||| ||||| || || | || |||||||| ||| |||| ||| ||| | Sbjct 149571009 ATCAACCTCTGCTGGTCTGGTGGAATACCTTCCTTGTC-CTGAATCTTTGCTTTCACGTT 149571067 Query 34636 A-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | ||| || || ||||||||| |||| || ||||| || ||||||| || || || Sbjct 149571068 ATCAATGGTATCCGAGCTCTCCACCTCCAAAGTGATCGTCTTCCCGGTTAGAGTCTTGAC 149571127 Query 34695 AAAAATCTGCAT 34706 || |||||||| Sbjct 149571128 GAATATCTGCAT 149571139 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || || ||| ||||||||| ||||| || || | ||| |||| | || || | || Sbjct 187644943 TGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCCAACTGC 187645002 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || || || || || | ||||||||| || || | ||| ||||| ||| ||| ||| Sbjct 187645003 TTTCCAGCGAAGATCAATCTCTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGGAT-TTT 187645061 Query 34624 TGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || || || | ||| ||||| |||||| || || | || || || || || || Sbjct 187645062 TGCCTTGACATTGTCAATAGTGTCAGAGCTCTCAACCTCAAGAGTAATTGTCTTCCCAGT 187645121 Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707 || ||||||||||| ||||||||| Sbjct 187645122 CAAAGTTTTCACAAAGATCTGCATG 187645146 Score = 91.5 bits (100), Expect = 9e-14 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 || || |||||||||||||| | ||| || || | || || || || ||||| ||||| Sbjct 187644043 TCTTTCTGAATGTTATAATCAGCAAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAA 187644102 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | | ||| ||||| ||||| | |||||||| || ||| || | || || | Sbjct 187644103 ATCAGCCTCTGCTGGTCTGGCGGGATACCCTCCTTATC-CTGAATCTTAGCCTTCACATT 187644161 Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 ||| || ||| ||||||||| |||| ||| ||||| || || || | ||| || || Sbjct 187644162 GTCAATGGTATCTGAGCTCTCCACCTCCAAGGTGATCGTCTTCCCAGTCAGCGTCTTGAC 187644221 Query 34695 AAAAATCTGCAT 34706 ||| || ||||| Sbjct 187644222 AAAGATTTGCAT 187644233 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 || || || ||||||||||| | ||| || || | || || || || || || ||||| Sbjct 149589203 TCTTTCTGGATGTTATAATCAGCAAGCGTACGACCATCCTCCAGCTGCTTGCCAGCAAAA 149589262 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | | ||| ||||| || || | || ||||| || ||| |||| ||| ||| | Sbjct 149589263 ATCAGCCTCTGCTGGTCTGGTGGAATACCTTCCTTATC-CTGAATCTTTGCTTTCACGTT 149589321 Query 34636 A-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | |||||| || ||||||||| |||| || ||||| || || |||| || || || Sbjct 149589322 ATCAATTGTATCCGAGCTCTCCACCTCCAAAGTGATCGTCTTCCCAGTTAGAGTCTTGAC 149589381 Query 34695 AAAAATCTGCAT 34706 || |||||||| Sbjct 149589382 GAATATCTGCAT 149589393 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || || | |||||| | ||| || || ||||||||||| || ||||| | Sbjct 338895 CCTCCCCTGAGCCTCAACACAAGATGAAGGGTCGATTCCTTTTGAATATTGTAATCGGCC 338954 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| | | ||||| | || ||||||||||| || || | || |||||||| || Sbjct 338955 AGTGTCCTTCCATCTTCCAACTGCTTACCGGCAAAAATCAACCTTTGCTGGTCCGGTGGG 339014 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| ||||| ||| || | || ||| | || ||||| ||| ||||| Sbjct 339015 ATACCCTCTTTGTC-CTGAATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGCTTTCCAC 339073 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || || || || || || ||||| || || ||||| Sbjct 339074 CTCAAGGGTAATGGTCTTGCCAGTCAAAGTCTTCACGAAGATTTGCAT 339121 >seq8 Length=153299543 Score = 122 bits (134), Expect = 5e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || || ||| ||||| |||||||| ||||| | | || || Sbjct 133642802 AGACGGAGCACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCGGCTAAAGTACGG 133642861 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || || |||||||| || || | || || || || || | ||| ||| Sbjct 133642862 CCGTCATCAAGCTGCTTTCCGGCAAAGATCAATCTTTGCTGATCTGGTGGAATTCCTTCC 133642921 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||||| | |||||| || ||| |||||| ||| ||||| || | ||| Sbjct 133642922 TTGTCCTGGATCTTA-GCCTTAACGTTATCAATGGTGTCTGAGCTTTCCACCTCGAGGGT 133642980 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | ||||||||||| |||||||| Sbjct 133642981 GATGGTCTTTCCGGTCAGGGTTTTCACAAAGATCTGCAT 133643019 Score = 100 bits (110), Expect = 2e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| ||||| || || ||| ||||| || ||||| ||||| | || || || Sbjct 133642574 AGACGCAATACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCCAGGGTACGG 133642633 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| | ||| ||||| ||||| || | | || ||||| ||||| | |||||| Sbjct 133642634 CCATCTTCCAATTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGCGGGATACCCTCC 133642693 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| ||| | |||||| | || ||||| ||| ||||| || | ||| Sbjct 133642694 TTGTC-CTGAATTTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGT 133642752 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || || || | || |||||||| |||||||| Sbjct 133642753 GACTGTCTTCCCAGTGAGGGTCTTCACAAAGATCTGCAT 133642791 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||||||| || || |||||| || ||||| ||||| | | Sbjct 133588652 CCACCACGAAGACGGAGCACCAAATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCA 133588711 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||||||||| || || | ||||| || || | || || || || || Sbjct 133588712 AGGGTACGGCCGTCTTCAAGCTGCTTGACTGCAAAGATCAACCTTTGCTGATCTGGGGGA 133588771 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTG-TGTCTTCGCTCTCCAC 34658 | || ||||||||| ||||| | ||||| | | || |||| ||| || || Sbjct 133588772 ATCCCTTCCTTGTCTTGAATCTTA-GCCTTAACATTGTCAGTGGTGTCAGAGCTTTCAAC 133588830 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || || |||| || || ||||||||||| || || Sbjct 133588831 ATCGAGCGTGATTGTCTTTCCGGGCAAAGTCTTCACAAAAATTTGTAT 133588878 >seq1308 Length=1742971 Score = 118 bits (130), Expect = 7e-22 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 || |||||||||||| || |||||| || ||||| || || | || ||||| |||| Sbjct 184283 CAGCACCAAATGGAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTTCGGCCGTC 184224 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 ||| ||||| || ||||| || || || | ||| ||||| || || | ||||||||| || Sbjct 184223 TTCGAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGGATTCCCTCCTTATC 184164 Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672 | ||| || | || || | || ||||| ||| ||||| |||| ||| || | Sbjct 184163 T-TGAATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTTTCCACCTCCAAGGTGATGG 184105 Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || ||||| | ||||||||||| |||||||| Sbjct 184104 TCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 184071 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | |||||| |||||||| |||||| || ||||| ||||| | Sbjct 184525 CCACCGCGAAGACGGAGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGCT 184466 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || | || || ||||| || || || | ||| ||||| || || Sbjct 184465 AGAGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGG 184406 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | ||||||||| ||| ||||| | || || | || ||||| ||||||||| Sbjct 184405 ATTCCCTCCTTATCTTGAATCTTG-GCCTTGACATTGTCGATGGTGTCGGAGCTCTCCAC 184347 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || || || || | || || || ||||| ||||| Sbjct 184346 TTCCAAAGTAATGGTCTTGCCTGTGAGGGTCTTAACGAAAATTTGCAT 184299 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || || || |||||||| || ||||| || || | || || || | ||||| || || Sbjct 184729 TGAAGGGTACTCTCCTTCTGGATGTTGTAGTCCGCGAGGGTACGGCCATCTTCTAGCTGC 184670 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||||||||| | | ||| ||||| || || | |||||||| || |||| || Sbjct 184669 TTTCCGGCAAATATAAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATC-TT 184611 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | || || ||| ||| ||||| |||| || || || || || || Sbjct 184610 GGCCTTGACGTTGTCTATGGTATCTGAGCTTTCCACCTCCAAAGTAATGGTCTTCCCTGT 184551 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | || || |||||||||||||| Sbjct 184550 GAGGGTCTTAACAAAAATCTGCAT 184527 >seq9 Length=238794889 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 || || || ||||||||||| | ||| || || | || || || || || || ||||| Sbjct 232658589 TCTTTCTGGATGTTATAATCAGCAAGCGTACGACCATCCTCCAGCTGCTTGCCAGCAAAG 232658530 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 ||||| | ||| || || || || | || ||||| || ||| |||| ||| || | Sbjct 232658529 ATTAACCTCTGCTGATCTGGTGGAATACCTTCCTTATC-CTGAATCTTTGCTTTCACATT 232658471 Query 34636 A-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | |||||| || ||||||||| |||| || ||||| || || |||| || || || Sbjct 232658470 ATCAATTGTATCCGAGCTCTCCACCTCCAAAGTGATCGTCTTCCCAGTTAGAGTCTTGAC 232658411 Query 34695 AAAAATCTGCAT 34706 || |||||||| Sbjct 232658410 GAATATCTGCAT 232658399 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 || || || ||||||||||| | ||| || || | || || || || || || ||||| Sbjct 232793922 TCTTTCTGGATGTTATAATCAGCAAGCGTACGACCATCCTCCAGCTGCTTGCCAGCAAAG 232793863 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 ||||| | ||| ||||| || || | || || || || ||| |||| ||| ||| | Sbjct 232793862 ATTAACCTCTGCTGGTCTGGTGGAATACCTTCTTTATC-CTGAATCTTTGCTTTCACGTT 232793804 Query 34636 A-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | ||| || || ||||||||| |||| || || || || ||||||| || || || Sbjct 232793803 ATCAATGGTATCCGAGCTCTCCACCTCCAAAGTGATTGTCTTCCCGGTTAGTGTCTTGAC 232793744 Query 34695 AAAAATCTGCAT 34706 || |||||||| Sbjct 232793743 GAATATCTGCAT 232793732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314723359207091