Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq3419 84.2 2e-11 >seq3419 Length=773737 Score = 84.2 bits (92), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 29040 AAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCG 29099 ||||||| | || || || |||||| | || |||||| ||||| | || ||||| Sbjct 377706 AAGCAAAGA-TTCAGGACAAGGAAGGTATTCCACCAGATCAGCAAAGGTTGATATTTGCT 377648 Query 29100 GGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACT 29159 |||||||| || |||||| ||| | || |||||||||||||||||||| || || Sbjct 377647 GGCAAACAGCTTGAAGATGGTCGCACTCTTGCAGATTACAATATTCAGAAGGAGTCCACC 377588 Query 29160 CTTCACATGGT 29170 |||||| |||| Sbjct 377587 CTTCACCTGGT 377577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428243265791420