Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq4995 125 2e-24 >seq4995 Length=1147 Score = 125 bits (138), Expect = 2e-24 Identities = 86/97 (89%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 30067 TTTTGCTGCTTCCAGCTCAACTCGCAGCTTCCCAACCGTAAGCGCAATATCCTCGTTCTC 30126 |||||||| ||| |||||||| ||||| ||||| || || |||||||||||||||||||| Sbjct 691 TTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTC 632 Query 30127 CTGGTCGCGGAGTTTGATGTATTGCTGTTTTTTATCC 30163 |||||||||| |||||||||||||||| ||| | ||| Sbjct 631 CTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCC 595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149926766650416