Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3410 91.5 4e-13 >seq3410 Length=967110 Score = 91.5 bits (100), Expect = 4e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 111702 CAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATT 111761 ||||||||||| | | ||| | | |||||||||||||||||||| || || || || Sbjct 225397 CAGTTTTATGTCGCCAATGGGGAGTTATCATGCCAAATGTATCAGCGCTCAGCAGACATG 225456 Query 111762 GGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCAT 111821 || || ||||| || |||||||| || ||| ||||| || |||||| | || |||||| Sbjct 225457 GGCCTGGGTGTACCATTTAATATCGCCTCTTATGCACTCCTAACTTGCATTATTGCTCAT 225516 Query 111822 TTT 111824 || Sbjct 225517 GTT 225519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303056955091448