Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq3419 105 6e-18 >seq3419 Length=773737 Score = 105 bits (116), Expect = 6e-18 Identities = 150/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| ||||| ||||| || |||||||| || | ||| |||| Sbjct 377557 ATGCAAATCTTTGTGAAAACCCTCACTGGGAAAACCATCACACTGGAAGTGGAGAGTTCT 377498 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | || ||| || ||| || || || || ||||| ||||||| Sbjct 377497 GACACAATTGATAATGTTAAAGCCAAGATTCAGGACAAGGAGGGAATCCCCCCTGATCAG 377438 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || | || | |||||||||||| ||||||||| || ||| | || || || ||| Sbjct 377437 CAGAGGTTGATATTTGCGGGCAAACAGCTAGAAGATGGCAGGACC-TTGCTGACTACAAC 377379 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||| || ||||||||| | || ||||| Sbjct 377378 ATTCAGAAGGAGTCTACTCTTCACTTGGTG 377349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425251913555680