Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3345 141 1e-28 >seq3345 Length=549657 Score = 141 bits (156), Expect = 1e-28 Identities = 120/148 (81%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 || || || ||||| || || ||||| || || |||||| || || ||||| ||||| Sbjct 163839 TGAAGCCCTTCGTCTCGTGAAATGAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGACCG 163898 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 ||||| |||| |||||||||||| || || |||||||||||||||||||| || ||||| Sbjct 163899 CGCTTTTTCAGCCAGAAAATCGCGCAGAAGGAACCCGAGAAGAAGATTCCTTCGACACAA 163958 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGG 126206 ||||| || | ||||||||| ||||||| Sbjct 163959 GCGAAGGCCACGAGACGCTCGGCAAAGG 163986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597220957633120