Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq10784 511 6e-140 seq2871 297 2e-75 seq3494 241 1e-58 seq3513 232 8e-56 seq3512 136 5e-27 seq3501 132 6e-26 seq3463 118 1e-21 seq3301 104 3e-17 seq2858 86.0 7e-12 >seq10784 Length=1928 Score = 511 bits (566), Expect = 6e-140 Identities = 679/940 (72%), Gaps = 2/940 (0%) Strand=Plus/Minus Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500 |||| |||||||||||| | ||||| || |||| | || ||| | | ||| || || Sbjct 1788 TTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATT 1730 Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560 | ||||||||||| || ||||| || ||||| || || || | ||||| || | || Sbjct 1729 ATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGA 1670 Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620 ||| | | ||||| ||||| || || |||||||| || |||| | || ||||| Sbjct 1669 TCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATA 1610 Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680 || | ||||| ||||| ||||||||||| ||| | |||||||||||||| || ||||| Sbjct 1609 GGTTTGCACTTTTACCCGATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGC 1550 Query 169681 GGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGA 169740 ||||||||| | | | | | |||||| | ||||| | | |||||||| | Sbjct 1549 GGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGT 1490 Query 169741 CAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 169800 |||||||||| | | | | || |||||||| ||||| ||||||||| || || Sbjct 1489 GAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCGTGGATTGCTGTTGCATATTCAGCT 1430 Query 169801 CCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCT 169860 || || | ||||| |||||| ||||| | |||||| | ||||| || || ||| Sbjct 1429 CCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCT 1370 Query 169861 GATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAG 169920 ||||||||||| ||||| ||||| |||||||||||||| ||| | || ||||| || ||| Sbjct 1369 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAG 1310 Query 169921 CATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCT 169980 || |||||||| ||||| || || |||||| ||| ||||| || | ||||| || || Sbjct 1309 CACAACATTCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCC 1250 Query 169981 TTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAG 170040 ||||| || ||||||||||| | || ||||| | | ||||| ||||| ||||| Sbjct 1249 CTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAA 1190 Query 170041 CAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTA 170100 | || || || | ||||| | ||||| ||||| |||||||| || || || ||| Sbjct 1189 AATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTA 1130 Query 170101 GCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGA 170160 || || || ||||| ||||| || | |||||||| |||||| ||||||||||| | Sbjct 1129 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGT 1070 Query 170161 AGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGT 170220 | |||| |||||| |||| | || ||||| ||| || | ||||| || || | ||| Sbjct 1069 TCTTTACATTTCTTCTTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGT 1010 Query 170221 ATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCT 170280 || |||| ||||| |||||| | ||||||||||| || ||||| || || |||||| | Sbjct 1009 ATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAGTCTGTAGTTGATAGT 950 Query 170281 AACGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAA 170340 | || | | || |||| |||| || | ||| | || ||| | ||||||||| Sbjct 949 CAAGGTCGTGTAATTAACACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAA 890 Query 170341 GTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACC 170380 ||| |||||| | ||||| ||||||||||| ||| ||| Sbjct 889 GTTTGACATGAACGTAATGCTCACAACTTCCCTCTACACC 850 >seq2871 Length=25858 Score = 297 bits (328), Expect = 2e-75 Identities = 468/666 (70%), Gaps = 11/666 (2%) Strand=Plus/Minus Query 169729 TACATGGGAAGACAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTT 169788 |||||||| | |||||||||| | | | | || ||||| || ||||| |||| Sbjct 14609 TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCATGGATTGCTGTT 14550 Query 169789 GCATACTCTGCACCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAG 169848 ||||| || || || ||| | || | ||| ||||| | |||||| | ||||| Sbjct 14549 GCATATTCAGCTCC--TAT----TACAGT---TGTTTTCTTGATCTACCCAATCGGTCAA 14499 Query 169849 GGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTT 169908 || || |||||||||||||| ||||| ||||| ||| ||||||||| ||| | || Sbjct 14498 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTAGTATTTTCAACTTCATGATTGTA 14439 Query 169909 TTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATG 169968 |||||| | || || |||||||| ||||||| || |||||| ||| ||||| || | Sbjct 14438 TTCCAAACTGAACACAACATTCTTGTGCATCCATTTCACATGTTAGGCGTAGCTGGTGTA 14379 Query 169969 TTCGGAGGATCTTTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGA 170028 ||||| || || ||||| || ||||| ||||| || || ||||| | | || || Sbjct 14378 TTCGGTGGCTCCCTATTCAGCGCTATGCACGGTTCCCTGGTAACTTCTAGTTTGATAAGG 14319 Query 170029 GAAACAACAGAGCAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACA 170088 ||||| | ||| | || || || | ||||| | ||||| ||||| |||||||| Sbjct 14318 GAAACCATAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACT 14259 Query 170089 TACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTT-ATCTTCCAGTATGCTTCATT 170147 || || || |||| || || ||||| ||||| | | || || ||||| |||| | || Sbjct 14258 TATAATATCGTAGGTGCTCATGGTTATTTTGG-CTTATTGATATTCCAATATGTTAGTTT 14200 Query 170148 CAACAACTCAAGAAGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTT 170207 ||||||||| | |||| |||||| |||||| || | ||| | | || | ||||| Sbjct 14199 CAACAACTCTCATTCTTTACATTTCTTCTTAGCAGCTTGGCTTGTAGAAAGTATCTGGTT 14140 Query 170208 AACCTCTATGGGTATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATC 170267 || || | ||||| |||| ||||| |||||| | |||| ||| || || ||||| | Sbjct 14139 CACTACTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGATTTGAATTTCAACCAGTT 14080 Query 170268 AGTTGTTGATGCTAACGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAA 170327 || |||||| | | || | | || |||| |||| || | || | | || Sbjct 14079 TGTAGTTGATAATTAAGGTCGTGTAATTAACACTTGGGCTGATATTATGAATCGTGATAA 14020 Query 170328 CTTGGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCATC 170387 | | | |||| ||||||||||||| | ||||| ||||||||||| |||||||||||| | Sbjct 14019 CCTTGATATGAAAGTTATGCATGACTGTAATGCTCACAACTTCCCTCTAGACCTAGCAGC 13960 Query 170388 TGCTGA 170393 || ||| Sbjct 13959 TGTTGA 13954 >seq3494 Length=2094846 Score = 241 bits (266), Expect = 1e-58 Identities = 307/423 (73%), Gaps = 0/423 (0%) Strand=Plus/Minus Query 169855 TTCTCTGATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAA 169914 || |||||||||||||| ||||| ||||| |||||||||||||| ||| | || ||| | Sbjct 1053856 TTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCTAG 1053797 Query 169915 GCAGAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGA 169974 || ||||| |||||||| ||||| || || |||||| ||| |||| || | |||| Sbjct 1053796 GCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGCATAGCTGGTGTATTCGAT 1053737 Query 169975 GGATCTTTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACA 170034 || || ||||| || || |||||||| | || ||||| | | ||||| ||||| Sbjct 1053736 GGCTCGCTATTCAGTGCTATACATGGTTCTTTGGTAACTTCTAGTTTGATCAGGGAAACC 1053677 Query 170035 ACAGAGCAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAAC 170094 | ||| | || || || | ||||| | ||||| ||||| |||||||| || || Sbjct 1053676 ATAGAAAATGAATCTGCTAATGAAGGTTAAAGATTCGGTCAAGAGGAAGAAACTTATAAT 1053617 Query 170095 ATAGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAAC 170154 || ||||| | || ||||| ||||| | | |||||||| |||||| ||||||||| Sbjct 1053616 ATCGTAGCTGTTCATGGTTATTTTGGCCAATTGATCTTCCAATATGCTAGTTTCAACAAC 1053557 Query 170155 TCAAGAAGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCT 170214 || | | || | |||||| |||| | || ||||| ||| || | |||||||| || Sbjct 1053556 TCTCGTTCTTTATATTTCTTCTTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTAACTGCT 1053497 Query 170215 ATGGGTATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTT 170274 | || || ||| ||||| |||||| | ||||||||||| || ||||| | || || Sbjct 1053496 TTAGGGATTAACACTATGGCCTTCAACCTAAATGGTTTCAATTTCAACCAGTATGTAATT 1053437 Query 170275 GAT 170277 ||| Sbjct 1053436 GAT 1053434 >seq3513 Length=3706331 Score = 232 bits (256), Expect = 8e-56 Identities = 365/519 (70%), Gaps = 3/519 (1%) Strand=Plus/Minus Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500 |||| |||||||||||| | ||||| || |||| | || ||| | ||| || || Sbjct 2689313 TTGGATGGTTTGGTGTT-TGATGATCCCTACCTTATTGACCGCAACTTT-TGTATTTATT 2689256 Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560 ||||||||||||| || ||||| || ||||| || || || | |||| | | || Sbjct 2689255 ATTGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGCATTCGTAAACCGATTTCTGGA 2689196 Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620 ||| | | ||||| || || || || ||| |||| || |||| | || ||||| Sbjct 2689195 TCTCTACTTTATGGAAATAATATTATTTCTAGTGCCATTATTCCTACTTCTGCAGCTATA 2689136 Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680 | | ||||| ||||| || |||||||| ||| | |||||||||||||| || ||||| Sbjct 2689135 AGTTTGCACTTTTACCCGATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGC 2689076 Query 169681 GGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGA 169740 | ||||||| | | | | | |||||| | ||||| | | ||||||| | Sbjct 2689075 GATCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGATCGT 2689016 Query 169741 CAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 169800 |||| ||||| | | | | || |||||||| ||||| ||||||||| | || Sbjct 2689015 GAGTGAGAACTTAGTTTCCGTCTGGGTATGCGTCCGTGGATTGCTGTTGCATATTTAGCT 2688956 Query 169801 CCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCT 169860 || || | ||||| |||||| ||||| | |||||| | ||||| || || | | Sbjct 2688955 CCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTTT 2688896 Query 169861 GATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAG 169920 ||||||||||| ||||| ||||| |||||||||||| ||| | || ||||| || ||| Sbjct 2688895 GATGGTATGCCTCTAGGAATCTCTAATACTTTCAACTTCATGATTGTATTCCAGGCTGAG 2688836 Query 169921 CATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTA 169959 || |||||||| ||||| || || |||||| ||| ||| Sbjct 2688835 CACAACATTCTTATGCACCCATTTCACATGTTAGGCGTA 2688797 >seq3512 Length=3897756 Score = 136 bits (150), Expect = 5e-27 Identities = 336/508 (66%), Gaps = 5/508 (1%) Strand=Plus/Minus Query 169863 TGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAGCA 169922 |||||| || |||| ||||| |||||||||||||||||| | || || | ||| | Sbjct 70255 TGGTATACCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTGTGTTTTAGATTGAGGA 70196 Query 169923 TAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCTTT 169982 |||||| | ||||| | || |||||| | | ||| || | || || | | | Sbjct 70195 CAACATTTTTATGCACACATTTCACATGTTAAGCATAGATGGTGTATTTTATGGCTTTCT 70136 Query 169983 ATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAGCA 170042 ||| || ||| ||||||| | || ||||| | | |||| |||| ||||| | Sbjct 70135 ATTTAGTGCTATGAATGGTTCCTTAGTAACTTCTATTTTGATCAAGAAAACCACAGAAAA 70076 Query 170043 AGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGC 170102 || | || | ||||| || || | ||||| ||| |||| || | | |||| Sbjct 70075 TGAATATGCTAATGAAGGTTAAAAATTTGATCAAGAGGAAAAAACTTATA----ATTAGC 70020 Query 170103 AGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAG 170162 || || ||||| |||| | | |||||| | |||||| ||||||||||| | Sbjct 70019 TGCTCATGGTTATGTTGGCCAATTGATCTTCTAATATGCTAGTTTCAACAACTCTCGTTC 69960 Query 170163 TCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTAT 170222 | |||| |||||| || ||| || ||| | || || | || | || || | | ||| Sbjct 69959 TTTACATTTCTTCTTAACAGCTTGGCCTATAATAGGTATTTGTGTTACTGCTTTAGATAT 69900 Query 170223 CTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCTAA 170282 ||| ||||| | || | | |||| ||| || || |||||||| || |||||| | | Sbjct 69899 TAGCATTATGGCTTACAGCATAAATGCTTT-AATTTCAACCAATCTGTCGTTGATAGTCA 69841 Query 170283 CGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAAGT 170342 || || | || || | |||| || | ||| | || ||| | ||||| || | Sbjct 69840 AGGTTGTATAATTAATACTTGAGCTGATATTATTAACCGTGCTAACCTTAGTATGAAAAT 69781 Query 170343 TATGCATGAAAGAAATGCACACAACTTC 170370 |||||||||| | |||| ||||||||| Sbjct 69780 TATGCATGAATGTCATGCTCACAACTTC 69753 >seq3501 Length=2764102 Score = 132 bits (146), Expect = 6e-26 Identities = 216/312 (69%), Gaps = 7/312 (2%) Strand=Plus/Minus Query 170059 GGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTT 170118 ||||| | ||| | ||||| ||||| || || || || ||| || || ||||| ||| Sbjct 1162814 GGTTACAGATTCAGTCAAGAGGAAGAGACTTATAATATCGTAATTGCTCATGGTTATTTT 1162755 Query 170119 GGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGTCTACACTTCTTCCTA 170178 || || | |||||||| |||||| ||||||| | | || | |||||| || Sbjct 1162754 GGCCGCTTGATCTTCCAATATGCT-------ACAACTCTCGTTCTTTATATTTCTTCTTA 1162702 Query 170179 GCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTC 170238 ||| || ||||| || || | ||||| || || | ||||| |||| || | ||| Sbjct 1162701 ACAGCTTGGCCTGTAGTTCGTATCTGGTTCACTGCTTTAGGTATTAGCACTATATCTTTC 1162642 Query 170239 AACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCTAACGGAAAAATCGTCCCA 170298 ||||| ||||||||||| || ||| | || || |||||| | | || | | Sbjct 1162641 AACTTAAATGGTTTCAATTTCAACGAGTCTGTAGTTGATAGTTAAGGTTGTGTAATTAAT 1162582 Query 170299 ACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAAGTTATGCATGAAAGAAAT 170358 || |||| |||| || | ||| || ||| | || |||||| ||||||||||| | ||| Sbjct 1162581 ACGTGGGTTGATATTATTAACCATGCTAACCTTGGAATGGAAATTATGCATGAACGTAAT 1162522 Query 170359 GCACACAACTTC 170370 || ||||||||| Sbjct 1162521 GCTCACAACTTC 1162510 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/191 (72%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 170068 TTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTT 170127 ||||| ||||| |||||||| ||||| || ||||| || || ||||| |||||| | | Sbjct 1485115 TTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGGTTGATTG 1485174 Query 170128 ATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGTCTACACTTCTTCCTAGCAGTTTTC 170187 || ||||| |||||| |||||||||| | | || | |||||| || | || Sbjct 1485175 ATATTCCAATATGCTAGTTTCAACAACTATCGTTTTTTATATTTCTTCTTAACGACTTGG 1485234 Query 170188 CCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCAACTTGAAT 170247 ||| | || || | ||||| || || | | ||| |||| ||| | ||||||| ||| Sbjct 1485235 CCTATAGTTGGTATCTGGTTTACTGCTTTAGTTATTAGCACTATGAC-TTCAACTAAAAT 1485293 Query 170248 GGTTTCAACTT 170258 |||||||| || Sbjct 1485294 GGTTTCAATTT 1485304 >seq3463 Length=1425124 Score = 118 bits (130), Expect = 1e-21 Identities = 177/249 (71%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500 |||| |||||||||||| | ||||| || |||| | || ||| | | ||| || || Sbjct 46922 TTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATT 46980 Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560 | |||||||| | | ||||| | |||| || || || | ||||| || | | Sbjct 46981 ATCACATTCATTACTGGTCCTCCATTAAATATTGATGGTATTCGTGAACCTGTTTCTGAA 47040 Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620 | | | | ||||| ||||| || || |||||||| || |||| | || ||||| Sbjct 47041 TATCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATA 47100 Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680 || | ||||| ||||| ||||||||||| ||| | ||||||||||||| || ||||| Sbjct 47101 GGTTTGCACTTTTACCCGATCTGGGAAGCGGCATCCTTTGATGAATGGTTATACAATGGC 47160 Query 169681 GGTCCTTAT 169689 ||||||||| Sbjct 47161 GGTCCTTAT 47169 >seq3301 Length=291840 Score = 104 bits (114), Expect = 3e-17 Identities = 220/323 (68%), Gaps = 9/323 (3%) Strand=Plus/Minus Query 169642 TGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGTGGTCCTTATCAGTTGGTAATC 169701 || |||| |||| |||||||||||||| || ||||||||||||| | | | | | Sbjct 13622 TGAGAAGTAGCATTCGTTGATGAATGGTTATACAATGGTGGTCCTTGTGAACTAATTGTT 13563 Query 169702 TTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGA 169761 || ||||| ||| || || || |||||||| | ||| |||| | | Sbjct 13562 TTACACTTACTTGGTG-TAGCTTGT--TACATGGGCCGTAAGTAAAAACTTAGTTTCCAT 13506 Query 169762 TTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCATTCGCT 169821 |||| ||||||| ||||| ||||||||| || || | ||| ||| || | || Sbjct 13505 CTAGGTATGCGTCTGTGGATTACTGTTGCATATTCAGCTTC--TAT-TGCAGCTGTTACT 13449 Query 169822 G---TATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGT 169878 | | ||||| | ||| || | |||| | || | |||||||||| | ||||| Sbjct 13448 GGTATTTTCTTGATCTACTCAATCAGTCAAAGAAGTTTTTATGATGGTATGTCTCTAGGG 13389 Query 169879 ATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAGCATAACATTCTAATGCAT 169938 ||||| ||||||||||| || ||| | || || ||| | ||| |||||||| || || Sbjct 13388 ATCTCTGGTACTTTCAATTTCATGATTGTATTTCAAACTGAGTGCAACATTCTTATCCAC 13329 Query 169939 CCTTTCCACATGGCAGGAGTAGC 169961 || || |||||| ||| ||||| Sbjct 13328 CCATTTCACATGTTAGGCGTAGC 13306 >seq2858 Length=30610 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 170299 ACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAAGTTATGCATGAAAGAAAT 170358 || |||| |||| || | ||| | || ||| | |||||||||||||| ||||| | ||| Sbjct 28612 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATATATGAACGTAAT 28553 Query 170359 GCACACAACTTCCCACTAGACCTAGCATCTGCTGA 170393 || ||||||||||| ||||||||||| ||| ||| Sbjct 28552 GCTCACAACTTCCCTCTAGACCTAGCGGCTGTTGA 28518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579084185797760