Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq10784 499 4e-136 seq2871 279 6e-70 seq3494 232 8e-56 seq3513 217 2e-51 seq3512 145 9e-30 seq3501 132 6e-26 seq3463 118 1e-21 seq3301 109 6e-19 seq3314 84.2 3e-11 >seq10784 Length=1928 Score = 499 bits (552), Expect = 4e-136 Identities = 698/979 (71%), Gaps = 0/979 (0%) Strand=Plus/Minus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 ||||| | ||| ||||| ||| | ||| | |||| |||| ||||| ||||| | Sbjct 1828 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1769 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| || | || ||| | | || || | ||||||||||| || ||| Sbjct 1768 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCATTCATTGCTGCTCCT 1709 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999 || || ||||| || || || | ||||| ||| | || ||| | | ||||| ||||| Sbjct 1708 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAAT 1649 Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059 || || |||||||| || |||| | || || |||||| | ||||| ||||| ||| Sbjct 1648 ATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCGATC 1589 Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATC 172119 |||||||| ||| |||| ||||||||||| |||||||| ||||||||| | | | | Sbjct 1588 TGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTT 1529 Query 172120 TTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGA 172179 | |||||| | | ||| | | |||||||| | |||||||||| | | | Sbjct 1528 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 1469 Query 172180 TTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCT 172239 | |||||| | || ||||| ||| ||||||||||| ||||| |||| || ||| Sbjct 1468 CTGGGTATGCGTCCGTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCT 1409 Query 172240 GTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 172299 || ||| | | || ||| ||||||| || || |||||||||||||| ||||| ||| Sbjct 1408 GTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 1349 Query 172300 TCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCT 172359 || ||||| |||||||| ||| | || ||||| || ||||| |||||||| ||||| || Sbjct 1348 TCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCA 1289 Query 172360 TTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGT 172419 || |||||| ||| ||||| || | || || || || ||||| || ||||| ||| Sbjct 1288 TTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 1229 Query 172420 TCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGA 172479 || || || || ||| | | ||||| || || || ||| ||||| || | || Sbjct 1228 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 1169 Query 172480 TACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT 172539 |||| ||||| ||||| |||||||| || || || ||||| || || ||||| ||||| Sbjct 1168 TACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGC 1109 Query 172540 CGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 172599 || | |||||||| |||||| |||||||||||| | | | || |||||| |||| Sbjct 1108 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCG 1049 Query 172600 GTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 172659 | || ||||| ||| || | ||||| || || | ||||| | || ||||| |||||| Sbjct 1048 GCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAAC 989 Query 172660 CTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACA 172719 || || |||||||| |||||||| || || || ||| | | ||| | || || Sbjct 988 CTAAATGGTTTCAATTTCAACCAGTCTGTAGTTGATAGTCAAGGTCGTGTAATTAACACT 929 Query 172720 TGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCA 172779 |||| ||| || ||||| | || ||||| |||||||||||| |||||| | ||||| Sbjct 928 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTTGACATGAACGTAATGCT 869 Query 172780 CACAACTTCCCATTAGACC 172798 ||||||||||| || ||| Sbjct 868 CACAACTTCCCTCTACACC 850 >seq2871 Length=25858 Score = 279 bits (308), Expect = 6e-70 Identities = 461/659 (70%), Gaps = 15/659 (2%) Strand=Plus/Minus Query 172147 TACATGGGAAGACAGTGGGAACTATCATACAGATTAGGTATGAGACCATGGATATGTGTA 172206 |||||||| | |||||||||| | | | | |||||| | |||||||| ||| Sbjct 14609 TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCATGGATTGCTGTT 14550 Query 172207 GCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAG 172266 ||||||||||| ||| | ||| | ||| || || || || ||| ||||||| Sbjct 14549 GCATATTCAGCTCCTATTACAGTTG--TTTTCT-TGATC------TACCCAATCGGTCAA 14499 Query 172267 GGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTG 172326 || || |||||||||||||| ||||| ||||| ||| |||||||| ||| | || Sbjct 14498 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTAGTATTTTCAACTTCATGATTGTA 14439 Query 172327 TTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATG 172386 |||||| | || || |||||||| ||||||| || |||||| ||| ||||| || | Sbjct 14438 TTCCAAACTGAACACAACATTCTTGTGCATCCATTTCACATGTTAGGCGTAGCTGGTGTA 14379 Query 172387 TTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGA 172446 || || || || ||||| || ||||||||||| | || || ||| | | || || Sbjct 14378 TTCGGTGGCTCCCTATTCAGCGCTATGCACGGTTCCCTGGTAACTTCTAGTTTGATAAGG 14319 Query 172447 GAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTTCGGACAAGAAGAAGAAACA 172506 || || | ||| ||||| || | || |||| ||||| ||||| |||||||| Sbjct 14318 GAAACCATAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACT 14259 Query 172507 TACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTT-ATCTTCCAGTATGCTTCTTT 172565 || || || |||| || || ||||| ||||| | | || || ||||| |||| | ||| Sbjct 14258 TATAATATCGTAGGTGCTCATGGTTATTTTGG-CTTATTGATATTCCAATATGTTAGTTT 14200 Query 172566 CAACAACTCAAGAAGTCTT--CACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGG 172623 ||||||||| | |||| || |||||| |||||| || | ||| | | || | ||| Sbjct 14199 CAACAACTC--TCATTCTTTACATTTCTTCTTAGCAGCTTGGCTTGTAGAAAGTATCTGG 14142 Query 172624 TTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAA 172683 || || || | ||||| | || ||||| |||||||| || | ||| || |||||||| Sbjct 14141 TTCACTACTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGATTTGAATTTCAACCAG 14082 Query 172684 TCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACATGGGGTGACGTTCTTAACAGAGCA 172743 | || || ||| | | ||| | || || |||| ||| || | || | | Sbjct 14081 TTTGTAGTTGATAATTAAGGTCGTGTAATTAACACTTGGGCTGATATTATGAATCGTGAT 14022 Query 172744 AACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCATTAGACCTTGC 172802 ||||| | |||| ||||||||||||| | ||||| ||||||||||| ||||||| || Sbjct 14021 AACCTTGATATGAAAGTTATGCATGACTGTAATGCTCACAACTTCCCTCTAGACCTAGC 13963 >seq3494 Length=2094846 Score = 232 bits (256), Expect = 8e-56 Identities = 344/488 (70%), Gaps = 0/488 (0%) Strand=Plus/Minus Query 172195 TGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCTTGTGTAT 172254 ||||| ||| ||||||||| ||| | |||| | |||||| || | | || Sbjct 1053934 TGGATTGCTGTTGCATATTCAAGTCCTATTGCAGCTACTACTGCTGTTTTTTCTATCTAC 1053875 Query 172255 CCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAAC 172314 | ||||||| || || |||||||||||||| ||||| ||||| ||||| |||||| Sbjct 1053874 TTAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAAC 1053815 Query 172315 TTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGA 172374 || ||| | || ||| | || ||||| |||||||| ||||| || || |||||| ||| Sbjct 1053814 TTCATGATTGTATTCTAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGC 1053755 Query 172375 GTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGTTACATCT 172434 |||| || | || | || || ||||| || || || |||||||| || || ||| Sbjct 1053754 ATAGCTGGTGTATTCGATGGCTCGCTATTCAGTGCTATACATGGTTCTTTGGTAACTTCT 1053695 Query 172435 TCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTTCGGACAA 172494 | | ||||| || || | ||| ||||| || | || || | ||||| ||| Sbjct 1053694 AGTTTGATCAGGGAAACCATAGAAAATGAATCTGCTAATGAAGGTTAAAGATTCGGTCAA 1053635 Query 172495 GAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAG 172554 || |||||||| || || || ||||| | || ||||| ||||| | | |||||||| Sbjct 1053634 GAGGAAGAAACTTATAATATCGTAGCTGTTCATGGTTATTTTGGCCAATTGATCTTCCAA 1053575 Query 172555 TATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCCTGTTGTA 172614 |||||| |||||||||||| | | | | |||||| |||| | || ||||| ||| Sbjct 1053574 TATGCTAGTTTCAACAACTCTCGTTCTTTATATTTCTTCTTAGCGGCTTGGCCTGTAGTA 1053515 Query 172615 TGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGGTTTCAAC 172674 || | |||||||| || | || || || ||||| |||||||| || |||||||| Sbjct 1053514 GGTATCTGGTTAACTGCTTTAGGGATTAACACTATGGCCTTCAACCTAAATGGTTTCAAT 1053455 Query 172675 TTCAACCA 172682 |||||||| Sbjct 1053454 TTCAACCA 1053447 >seq3513 Length=3706331 Score = 217 bits (240), Expect = 2e-51 Identities = 323/458 (71%), Gaps = 0/458 (0%) Strand=Plus/Minus Query 171920 TTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTT 171979 ||||||||||||| || ||||| || ||||| || || || | |||| || | || | Sbjct 2689254 TTGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGCATTCGTAAACCGATTTCTGGAT 2689195 Query 171980 CTTTCTTATATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAG 172039 || | | ||||| || || || || ||| |||| || |||| | || || ||| Sbjct 2689194 CTCTACTTTATGGAAATAATATTATTTCTAGTGCCATTATTCCTACTTCTGCAGCTATAA 2689135 Query 172040 GTCTCCACTTCTACCCTATCTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTG 172099 || | ||||| ||||| || |||||||| ||| |||| ||||||||||| |||||||| | Sbjct 2689134 GTTTGCACTTTTACCCGATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCG 2689075 Query 172100 GTCCTTATCAGTTGGTAATCTTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGAC 172159 ||||||| | | | | | |||||| | | ||| | | ||||||| | Sbjct 2689074 ATCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGATCGTG 2689015 Query 172160 AGTGGGAACTATCATACAGATTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCAC 172219 |||| ||||| | | | | |||||| | || ||||| ||| ||||||| ||| | Sbjct 2689014 AGTGAGAACTTAGTTTCCGTCTGGGTATGCGTCCGTGGATTGCTGTTGCATATTTAGCTC 2688955 Query 172220 CTGTATCAGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTG 172279 |||| |||| || ||||| ||| | | || ||| ||||||| || || | || Sbjct 2688954 CTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTTTG 2688895 Query 172280 ATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGC 172339 |||||||||| ||||| ||||| ||| |||||||| ||| | || ||||| || |||| Sbjct 2688894 ATGGTATGCCTCTAGGAATCTCTAATACTTTCAACTTCATGATTGTATTCCAGGCTGAGC 2688835 Query 172340 ATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTA 172377 | |||||||| ||||| || || |||||| ||| ||| Sbjct 2688834 ACAACATTCTTATGCACCCATTTCACATGTTAGGCGTA 2688797 >seq3512 Length=3897756 Score = 145 bits (160), Expect = 9e-30 Identities = 338/508 (67%), Gaps = 5/508 (1%) Strand=Plus/Minus Query 172281 TGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCA 172340 |||||| || |||| ||||| ||||| |||||||||||| | ||||| | ||| | Sbjct 70255 TGGTATACCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTGTGTTTTAGATTGAGGA 70196 Query 172341 TAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTT 172400 |||||| | ||||| | || |||||| | | ||| || | ||| || | | | Sbjct 70195 CAACATTTTTATGCACACATTTCACATGTTAAGCATAGATGGTGTATTTTATGGCTTTCT 70136 Query 172401 ATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGC 172460 ||| || ||| | ||||| ||||| || ||| | | |||| | || || ||| Sbjct 70135 ATTTAGTGCTATGAATGGTTCCTTAGTAACTTCTATTTTGATCAAGAAAACCACAGAAAA 70076 Query 172461 AGAATCACAGAACTACGGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGC 172520 |||| || | || || || || | ||||| ||| |||| || || |||| Sbjct 70075 TGAATATGCTAATGAAGGTTAAAAATTTGATCAAGAGGAAAAAACTTATAAT----TAGC 70020 Query 172521 AGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAG 172580 || || ||||| |||| | | |||||| | |||||| |||||||||||| | Sbjct 70019 TGCTCATGGTTATGTTGGCCAATTGATCTTCTAATATGCTAGTTTCAACAACTCTCGTTC 69960 Query 172581 TCTTCACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTAT 172640 | | || |||||| || ||| || ||| | || || | || | || || | | ||| Sbjct 69959 TTTACATTTCTTCTTAACAGCTTGGCCTATAATAGGTATTTGTGTTACTGCTTTAGATAT 69900 Query 172641 CTGTACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAA 172700 | | ||||| | || | | || | ||| || ||||||||||| || || ||| | | Sbjct 69899 TAGCATTATGGCTTACAGCATAAATGCTTT-AATTTCAACCAATCTGTCGTTGATAGTCA 69841 Query 172701 CGGTAAGATTGTTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGT 172760 ||| || || ||| || | ||| || ||||| | || ||||| ||||| || | Sbjct 69840 AGGTTGTATAATTAATACTTGAGCTGATATTATTAACCGTGCTAACCTTAGTATGAAAAT 69781 Query 172761 TATGCATGAAAGAAATGCACACAACTTC 172788 |||||||||| | |||| ||||||||| Sbjct 69780 TATGCATGAATGTCATGCTCACAACTTC 69753 >seq3501 Length=2764102 Score = 132 bits (146), Expect = 6e-26 Identities = 216/312 (69%), Gaps = 7/312 (2%) Strand=Plus/Minus Query 172477 GGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTT 172536 || |||| ||| | ||||| ||||| || || || || ||| || || ||||| ||| Sbjct 1162814 GGTTACAGATTCAGTCAAGAGGAAGAGACTTATAATATCGTAATTGCTCATGGTTATTTT 1162755 Query 172537 GGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTA 172596 || || | |||||||| |||||| ||||||| | | | | |||||| || Sbjct 1162754 GGCCGCTTGATCTTCCAATATGCT-------ACAACTCTCGTTCTTTATATTTCTTCTTA 1162702 Query 172597 GCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTC 172656 ||| || ||||| || || | ||||| || || | ||||| | || || | ||| Sbjct 1162701 ACAGCTTGGCCTGTAGTTCGTATCTGGTTCACTGCTTTAGGTATTAGCACTATATCTTTC 1162642 Query 172657 AACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCT 172716 ||| | || |||||||| |||||| | || || || ||| | | ||| | || | Sbjct 1162641 AACTTAAATGGTTTCAATTTCAACGAGTCTGTAGTTGATAGTTAAGGTTGTGTAATTAAT 1162582 Query 172717 ACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAAT 172776 || |||| ||| || ||||| || ||||| || |||||| ||||||||||| | ||| Sbjct 1162581 ACGTGGGTTGATATTATTAACCATGCTAACCTTGGAATGGAAATTATGCATGAACGTAAT 1162522 Query 172777 GCACACAACTTC 172788 || ||||||||| Sbjct 1162521 GCTCACAACTTC 1162510 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/193 (70%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 172486 TTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTT 172545 ||||| ||||| |||||||| ||||| || ||||| || || ||||| |||||| | | Sbjct 1485115 TTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGGTTGATTG 1485174 Query 172546 ATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTC 172605 || ||||| |||||| ||||||||||| | | | | |||||| || | || Sbjct 1485175 ATATTCCAATATGCTAGTTTCAACAACTATCGTTTTTTATATTTCTTCTTAACGACTTGG 1485234 Query 172606 CCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAAC 172665 ||| | || || | ||||| || || | | ||| | || ||| | |||||| || Sbjct 1485235 CCTATAGTTGGTATCTGGTTTACTGCTTTAGTTATTAGCACTATGAC-TTCAACTAAAAT 1485293 Query 172666 GGTTTCAACTTCA 172678 |||||||| |||| Sbjct 1485294 GGTTTCAATTTCA 1485306 >seq3463 Length=1425124 Score = 118 bits (130), Expect = 1e-21 Identities = 199/288 (69%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 ||||| | || ||||| ||| | ||| | |||| |||| ||||| ||||| | Sbjct 46882 TTCTGTAACTGAATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 46941 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| || | || ||| | | || || | |||||||| | | ||| Sbjct 46942 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCACATTCATTACTGGTCCT 47001 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999 || | |||| || || || | ||||| ||| | | | | | | ||||| ||||| Sbjct 47002 CCATTAAATATTGATGGTATTCGTGAACCTGTTTCTGAATATCTACTTTATGGAAACAAT 47061 Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059 || || |||||||| || |||| | || || |||||| | ||||| ||||| ||| Sbjct 47062 ATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCGATC 47121 Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTAT 172107 |||||||| ||| || | ||||||||||| |||||||| ||||||||| Sbjct 47122 TGGGAAGCGGCATCCTTTGATGAATGGTTATACAATGGCGGTCCTTAT 47169 >seq3301 Length=291840 Score = 109 bits (120), Expect = 6e-19 Identities = 222/329 (67%), Gaps = 3/329 (1%) Strand=Plus/Minus Query 172051 TACCCTATCTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAG 172110 |||| || || |||| |||| ||| ||||||||||| |||||||||||||||| | | Sbjct 13631 TACCTTACTTGAGAAGTAGCATTCGTTGATGAATGGTTATACAATGGTGGTCCTTGTGAA 13572 Query 172111 TTGGTAATCTTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTA 172170 | | | || ||||| ||| ||| | | |||||||| | ||| |||| Sbjct 13571 CTAATTGTTTTACACTTACTT---GGTGTAGCTTGTTACATGGGCCGTAAGTAAAAACTT 13515 Query 172171 TCATACAGATTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCA 172230 | | |||||||| | | ||||| ||| ||||||||||| || | |||| Sbjct 13514 AGTTTCCATCTAGGTATGCGTCTGTGGATTACTGTTGCATATTCAGCTTCTATTGCAGCT 13455 Query 172231 GCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCA 172290 | || | | ||| | | || || || |||| | || | |||||||||| | Sbjct 13454 GTTACTGGTATTTTCTTGATCTACTCAATCAGTCAAAGAAGTTTTTATGATGGTATGTCT 13395 Query 172291 CTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTA 172350 ||||| ||||| ||||| ||||| || ||| | || || ||| | ||| |||||||| Sbjct 13394 CTAGGGATCTCTGGTACTTTCAATTTCATGATTGTATTTCAAACTGAGTGCAACATTCTT 13335 Query 172351 ATGCATCCTTTCCACATGGCAGGAGTAGC 172379 || || || || |||||| ||| ||||| Sbjct 13334 ATCCACCCATTTCACATGTTAGGCGTAGC 13306 >seq3314 Length=478066 Score = 84.2 bits (92), Expect = 3e-11 Identities = 196/296 (66%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 173266 TTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGACTTGTAGGCATCAGA 173325 || |||| |||||||| ||| | |||| ||| | | || || || | | || Sbjct 267397 TTCGGACCAATAGGTTTTATGTTAGGTCAATTTAAACTTGCTCGATTTATTTAATTGTGA 267456 Query 173326 CCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACTAGCATCTTTTTAATC 173385 ||||| || | | | |||||||||| | || || | || | || || || || Sbjct 267457 CCTTATAATGTAATTGCATTCTCTGGTCCAATTGCTATTTTTGTTTCTATATTCTTGATT 267516 Query 173386 TACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGTGTCGCAGCAATCTTT 173445 |||||| |||| || |||||||||| || ||| || ||||| ||| || || Sbjct 267517 TACCCATTAGGTCAATTTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAACAGTTATAATT 267576 Query 173446 CGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAATCCATTTCACATGATG 173505 | | ||| |||| | || || || || || |||||||| ||||||| |||||| Sbjct 267577 TGATTCATCCTATTTTTTCAGGGGTTTCATAATTAGACATTGAACTCATTTCATATGATG 267636 Query 173506 GGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCATGGTGCAACAGT 173561 || ||||| || || | || | || | |||| || ||||||||||| ||||| Sbjct 267637 GGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATACGCTATTCATGGTGCTACAGT 267692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587920623231040