Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06]
17,764 sequences; 369,781,828 total letters
Query= NC_015286.1
Length=175230
Score E
Sequences producing significant alignments: (Bits) Value
seq10784 630 8e-176
seq2871 333 3e-86
seq3494 302 5e-77
seq3513 291 9e-74
seq3405 176 5e-39
seq3463 174 2e-38
seq3314 149 7e-31
seq3501 143 3e-29
seq3301 138 1e-27
seq3512 118 1e-21
seq3421 109 6e-19
seq2858 91.5 2e-13
>seq10784
Length=1928
Score = 630 bits (698), Expect = 8e-176
Identities = 732/992 (74%), Gaps = 6/992 (1%)
Strand=Plus/Minus
Query 167097 TGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTGATGATCCCT 167156
||| | ||||||||| | |||||||| || | || ||||| || ||| |||||||||||
Sbjct 1819 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 1760
Query 167157 ACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTCCTCCTGTGGA 167215
|| || | | ||||| ||||| || || ||||| ||| | | ||||||||| || ||
Sbjct 1759 ACCTTATTGACCGCAACT-TCTGTATTTATTATCGCATTCATTGCTGCTCCTCCAGTAGA 1701
Query 167216 CATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTC 167275
|| |||||||| || ||||| ||| |||| || || | ||||| ||||| || || ||
Sbjct 1700 TATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTC 1641
Query 167276 TGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCATCTGGGAAGC 167335
|||||| || ||||| ||||| ||||| ||| | ||||| || || |||||||||||
Sbjct 1640 TGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCGATCTGGGAAGC 1581
Query 167336 AGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGTTTTCCACTT 167395
||| || | || || ||||| |||||||| ||||||| |||| | ||| | |||||
Sbjct 1580 GGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTT 1521
Query 167396 CCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTAT 167455
| | |||| | | || |||||||||||||||||||| || |||||| |||||
Sbjct 1520 CTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTAT 1461
Query 167456 GCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCT 167515
|||||| ||||| ||||||||| || ||||| || || || || | ||||| ||| |
Sbjct 1460 GCGTCCGTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTT 1401
Query 167516 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTAC 167575
|||| || |||||||||| ||| ||||| | |||||||| || |||||||||||
Sbjct 1400 GATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTAC 1341
Query 167576 ATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATAT 167635
||||||| |||| |||| ||||| || ||||||||||| || |||||||| || || ||
Sbjct 1340 TTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACAT 1281
Query 167636 GCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGT 167695
| | ||||| ||||| ||||||||||| || || |||||||| ||||| ||||| ||||
Sbjct 1280 GTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 1221
Query 167696 TACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTT 167755
|| ||| || | | |||||||| |||| ||| || || | ||||||| ||
Sbjct 1220 AACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATT 1161
Query 167756 CGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGAT 167815
|||||| || ||||| || ||||| ||||| |||||||||||||| || || || ||||
Sbjct 1160 CGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGAT 1101
Query 167816 CTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCC 167875
||||||||| || ||||||||||| || || | || |||||||| || || |||||
Sbjct 1100 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCC 1041
Query 167876 TGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGG 167935
||| || |||||||||| |||||||| || ||
Sbjct 1040 TGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGG 981
Query 167936 TTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAGA 167995
|||||| |||||||||||| | |||||||| ||| || | |||||||| ||
Sbjct 980 TTTCAATTTCAACCAGTCTGTAGTTGATAGTCAAGGTCGTGTAATTAACACTTGGGCTGA 921
Query 167996 CGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTT 168055
| | ||||||||| || |||||||||||| || || |||||||||||||||||
Sbjct 920 TATTATTAACCGTGCTAACCTTGGTATGGAAGTTTGACATGAACGTAATGCTCACAACTT 861
Query 168056 CCCTCTCGACCTT---GCTGCTGCTGAGTCCA 168084
|||||| ||| | |||| |||||| ||||
Sbjct 860 CCCTCTACACCCTCCGGCTGTTGCTGA-TCCA 830
>seq2871
Length=25858
Score = 333 bits (368), Expect = 3e-86
Identities = 499/715 (70%), Gaps = 15/715 (2%)
Strand=Plus/Minus
Query 167368 GTCCTTTCCAACTCGTAGTTTTCCACTTCCTGATTGGCATCTATGCCTAT---ATGGGTC 167424
||||||| |||| | ||| | ||||| | |||| | || || ||| |||||||
Sbjct 14656 GTCCTTTTGAACTAATTGTTCTATACTTCTTATTTGG--TGTA-GCTTATTACATGGGTC 14600
Query 167425 GTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTG 167484
||||||||||||| || |||||| |||||||| || ||||| ||||||||| || |
Sbjct 14599 GTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCATGGATTGCTGTTGCATATTCAG 14540
Query 167485 CTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCT 167544
|||| | | ||| ||| ||| | |||| || |||||||||| ||| |
Sbjct 14539 CTCCTAT---TACAGT------TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTT 14489
Query 167545 CTGACGCGATGCCTCTTGGTATCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAG 167604
|||| | |||||||| || |||||| ||| ||||||| |||| |||| |||||| | |
Sbjct 14488 CTGATGGTATGCCTCTAGGAATCTCTAGTATTTTCAACTTCATGATTGTATTCCAAACTG 14429
Query 167605 AGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTT 167664
| |||||||| || |||| || || || ||| | ||||| ||||| |||||||| || |
Sbjct 14428 AACACAACATTCTTGTGCATCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGTGGCT 14369
Query 167665 CTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCG 167724
| || ||||| || ||||||||||| ||||| || ||| || | | ||||||| |
Sbjct 14368 CCCTATTCAGCGCTATGCACGGTTCCCTGGTAACTTCTAGTTTGATAAGGGAAACCATAG 14309
Query 167725 AAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCG 167784
||| ||| || || | ||||||| |||||||| || ||||| || ||||| ||||
Sbjct 14308 AAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCG 14249
Query 167785 TCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCC 167844
| | |||||||||||| || || |||| |||||||| | ||||||||||| |
Sbjct 14248 TAGGTGCTCATGGTTATTTTGGCTTATTGATATTCCAATATGTTAGTTTCAACAACTCTC 14189
Query 167845 GCTCGCTGCACTTCTTCTTGGCAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNN 167904
|| | || |||||||| ||||| |||| ||| | |||||||||
Sbjct 14188 ATTCTTTACATTTCTTCTTAGCAGCTTGGCTTGTAGAAAGTATCTGGTTCACTACTTTAG 14129
Query 167905 NNNNNNNNNNNNNNNNATTCAACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATA 167964
|||||||| || | ||| || |||||||||| | | ||||||
Sbjct 14128 GTATTAGCACTATGGCTTTCAACCTAAATGATTTGAATTTCAACCAGTTTGTAGTTGATA 14069
Query 167965 GTTCTGGTAAGGTTCTGCCTACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGG 168024
|| ||| || | |||||||| || | | || |||| | || | ||||
Sbjct 14068 ATTAAGGTCGTGTAATTAACACTTGGGCTGATATTATGAATCGTGATAACCTTGATATGA 14009
Query 168025 AAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 168079
|||||||||| || |||||||||||||||||||||| ||||| || |||| |||
Sbjct 14008 AAGTTATGCATGACTGTAATGCTCACAACTTCCCTCTAGACCTAGCAGCTGTTGA 13954
>seq3494
Length=2094846
Score = 302 bits (334), Expect = 5e-77
Identities = 355/478 (74%), Gaps = 8/478 (2%)
Strand=Plus/Minus
Query 167419 TGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCAT 167478
||| ||||||||||||||| || |||||| ||||||||| ||||| ||||||||
Sbjct 1053978 TGGATCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTATGTGGATTGCTGTTGCAT 1053919
Query 167479 ACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATC--CTT--TCGGTCAA 167534
| || ||| | || || | ||||||| || |||||| ||| ||||||||
Sbjct 1053918 ATTCAAGTCCTATTGCAGCTACTACTGCTGTTTTT----TCTATCTACTTAATCGGTCAA 1053863
Query 167535 GGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTACATTCAACTACATGCTTGTC 167594
|| ||| ||||| | |||||||| || ||||||||||| ||||||| |||| ||||
Sbjct 1053862 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 1053803
Query 167595 TTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTA 167654
||| | || ||||||||||| || |||||||| || || ||| | ||| | ||||| |||
Sbjct 1053802 TTCTAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGCATAGCTGGTGTA 1053743
Query 167655 TTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACCTCTTCGCTGGTTCGT 167714
|||| || || || |||||||| || || |||||| |||| || ||| || | |
Sbjct 1053742 TTCGATGGCTCGCTATTCAGTGCTATACATGGTTCTTTGGTAACTTCTAGTTTGATCAGG 1053683
Query 167715 GAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAGGAAGAAGAGACG 167774
||||||| |||| ||| || || | ||||| | |||||||| || ||||| ||
Sbjct 1053682 GAAACCATAGAAAATGAATCTGCTAATGAAGGTTAAAGATTCGGTCAAGAGGAAGAAACT 1053623
Query 167775 TATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTC 167834
||||| ||||| |||| ||||||||| || || | ||||||||||||| || |||
Sbjct 1053622 TATAATATCGTAGCTGTTCATGGTTATTTTGGCCAATTGATCTTCCAATATGCTAGTTTC 1053563
Query 167835 AACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCTGTTGTTGGTATCTGGT 167892
|||||||| || || | | |||||||| || || |||||||| || ||||||||||
Sbjct 1053562 AACAACTCTCGTTCTTTATATTTCTTCTTAGCGGCTTGGCCTGTAGTAGGTATCTGGT 1053505
>seq3513
Length=3706331
Score = 291 bits (322), Expect = 9e-74
Identities = 382/525 (73%), Gaps = 3/525 (1%)
Strand=Plus/Minus
Query 167130 GGTTGGTTCGGCGTTCTGATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCAT 167188
|| ||||| || ||| ||||||||||||| || | | ||||| | ||| || || ||
Sbjct 2689311 GGATGGTTTGGTGTT-TGATGATCCCTACCTTATTGACCGCAACTTT-TGTATTTATTAT 2689254
Query 167189 CGCCTTCGTCGGTGCTCCTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTC 167248
|| ||| | | ||||||||| || || || ||||| || || |||| || |||| ||
Sbjct 2689253 TGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGCATTCGTAAACCGATTTCTGGATC 2689194
Query 167249 ACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGG 167308
|| | ||||| || || || || ||| |||| || ||||| ||||| ||||| |
Sbjct 2689193 TCTACTTTATGGAAATAATATTATTTCTAGTGCCATTATTCCTACTTCTGCAGCTATAAG 2689134
Query 167309 TCTTCACTTCTATCCCATCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGG 167368
| | ||||| || || || |||||||| ||| || | || || ||||| |||||||| |
Sbjct 2689133 TTTGCACTTTTACCCGATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGA 2689074
Query 167369 TCCTTTCCAACTCGTAGTTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGA 167428
||||| |||| | ||| | |||||| | |||| | | || |||| ||||||
Sbjct 2689073 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGATCGTGA 2689014
Query 167429 GTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCC 167488
||| ||||| || |||||| ||||||||||| ||||| ||||||||| | |||||
Sbjct 2689013 GTGAGAACTTAGTTTCCGTCTGGGTATGCGTCCGTGGATTGCTGTTGCATATTTAGCTCC 2688954
Query 167489 AGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGA 167548
|| || || || | ||||| ||| | |||| || |||||||||| ||| | |||
Sbjct 2688953 TGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTTTGA 2688894
Query 167549 CGCGATGCCTCTTGGTATCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCA 167608
| |||||||| || |||||| ||| ||||||| |||| |||| ||||| || |||||
Sbjct 2688893 TGGTATGCCTCTAGGAATCTCTAATACTTTCAACTTCATGATTGTATTCCAGGCTGAGCA 2688834
Query 167609 CAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGT 167653
|||||| || |||||||| || || ||| | ||||| |||| ||
Sbjct 2688833 CAACATTCTTATGCACCCATTTCACATGTTAGGCGTAACTGGTGT 2688789
>seq3405
Length=1277461
Score = 176 bits (194), Expect = 5e-39
Identities = 409/623 (66%), Gaps = 38/623 (6%)
Strand=Plus/Plus
Query 168861 TACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTAC 168920
|| ||||| ||||| ||||||||||| || | |||||||||| ||| || || || |||
Sbjct 863006 TATAATGCAATTGCATTCTCTGGTCCAATTGTTGTTTTTGTTTACGTATTCCTGATTTAC 863065
Query 168921 CCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGA 168980
|| | |||||||| |||||||| || | | ||| || || |||| || || |||
Sbjct 863066 CCATTAGGTCAATCTAGTTGGTTCTTTGTGTCTAGTTTTGGTGTAACAGCTATATTTCGA 863125
Query 168981 TTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATATGATGGGT 169040
||| | ||||| | ||| | || || || ||||| ||| | | |||
Sbjct 863126 TTCATCCTCTTTTTCCAAAGGTTTCACAATTGGACTCTG-----CTCTGCTAT------- 863173
Query 169041 GTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAAT 169100
| ||| || || ||||||||| || || | |||
Sbjct 863174 ------GCTAT----------GCGTT----------ATTCATGGTCCTATCATAAAAAAT 863207
Query 169101 ACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCACTCAGGAA 169160
||| | | | | ||||| || ||||||| || || ||| || ||||| |
Sbjct 863208 ACTTTATTTGAGGATGGCGATGGTGCAAATAAATTATGTGCTTTTAACCCAACTCAAGTC 863267
Query 169161 GAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGGTATTGCG 169220
| || | ||||||||| | ||||| || ||||| ||||| || ||||||||| ||||
Sbjct 863268 AAAGAAATTTATTCAATGATCACTGCTAAACGTTTTTGGTCCCAAATCTTTGGTGTTGCT 863327
Query 169221 TTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGG 169280
|| ||||| | || || |||||||||||| | ||||| | || | || | ||
Sbjct 863328 TTTTCCAATAAACGCTGATTACATTTCTTTATGTTATTTGTGCTAGTAACTAGTTTATGA 863387
Query 169281 ACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCC 169340
| || | | | | | ||||| ||| | ||||| |||| |||||||| |||||
Sbjct 863388 ATGTGTGCTCTTTGAGTAGTCGGTCTGGCTTTGAACCTATGTGCCTATGACTTCCTTTCC 863447
Query 169341 CAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAACATCCTC 169400
|| || | | | |||||| ||||||| || |||||||| |||| |||||| | || ||
Sbjct 863448 CAGGAAACCTGTGCAGCAAAAGATCCTGAATTTGAGACTTTCTGCACCAAAACTATTCTT 863507
Query 169401 TTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAACTTTGTG 169460
|| ||| | || ||| ||| ||| | || || ||||| |||| ||| ||| || |
Sbjct 863508 TTAAACCGAAGTATTCATGCTTGGATGGCGGCTCAAGATCAGCCTCCTGAAAACCTTATA 863567
Query 169461 TTCCCTGAGGAAGTACTTCCCCG 169483
||| || |||| || || || ||
Sbjct 863568 TTCTCTAAGGAGGTTCTACCACG 863590
>seq3463
Length=1425124
Score = 174 bits (192), Expect = 2e-38
Identities = 217/295 (74%), Gaps = 2/295 (1%)
Strand=Plus/Plus
Query 167103 ACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTGATGATCCCTACGTTG 167162
||||||||| | |||||||| || | || ||||| || ||| ||||||||||||| ||
Sbjct 46897 ACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTA 46956
Query 167163 CTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTCCTCCTGTGGACATCGA 167221
| | |||| | ||||| || || ||| | ||| | || |||||| | | || ||
Sbjct 46957 TTGACCGCAA-CTTCTGTATTTATTATCACATTCATTACTGGTCCTCCATTAAATATTGA 47015
Query 167222 TGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGC 167281
|||||| || ||||| ||| ||| | || | ||||| ||||| || || ||||||||
Sbjct 47016 TGGTATTCGTGAACCTGTTTCTGAATATCTACTTTATGGAAACAATATTATTTCTGGTGC 47075
Query 167282 AGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCATCTGGGAAGCAGCAAC 167341
|| ||||| ||||| ||||| ||| | ||||| || || ||||||||||| ||| |
Sbjct 47076 CATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCGATCTGGGAAGCGGCATC 47135
Query 167342 CCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGTTTTCCACTTC 167396
| | || || ||||| |||||||| ||||||| |||| | ||| | ||||||
Sbjct 47136 CTTTGATGAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTC 47190
>seq3314
Length=478066
Score = 149 bits (164), Expect = 7e-31
Identities = 237/340 (70%), Gaps = 0/340 (0%)
Strand=Plus/Plus
Query 168796 CTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACGTCTCATCGGTATCC 168855
|||||| | ||| ||||| ||| | |||| ||| |||| || || | || |
Sbjct 267395 CTTTCGGACCAATAGGTTTTATGTTAGGTCAATTTAAACTTGCTCGATTTATTTAATTGT 267454
Query 168856 GTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCA 168915
| || || |||| ||||| ||||||||||| || ||| |||||||| | || | |
Sbjct 267455 GACCTTATAATGTAATTGCATTCTCTGGTCCAATTGCTATTTTTGTTTCTATATTCTTGA 267514
Query 168916 TCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCT 168975
| ||||| | ||||||| ||||||| || || || ||| || || ||| ||
Sbjct 267515 TTTACCCATTAGGTCAATTTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAACAGTTATAA 267574
Query 168976 TCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATATGA 169035
| ||||| | || || | || || || ||||| | |||| |||| ||||||||||||
Sbjct 267575 TTTGATTCATCCTATTTTTTCAGGGGTTTCATAATTAGACATTGAACTCATTTCATATGA 267634
Query 169036 TGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGTAG 169095
|||| || || ||| | ||||| | || |||| | || |||||||||| ||||||||
Sbjct 267635 TGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATACGCTATTCATGGTGCTACAGTAG 267694
Query 169096 AGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTT 169135
| |||||| | | | |||||||| |||||||| ||
Sbjct 267695 AAAATACTTCATTTGAGGATGGTGATGGTGCAAATACATT 267734
>seq3501
Length=2764102
Score = 143 bits (158), Expect = 3e-29
Identities = 213/312 (68%), Gaps = 7/312 (2%)
Strand=Plus/Minus
Query 167745 GGTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTC 167804
||||||| ||| |||| || |||||||| ||||| ||||| |||||||||||| ||
Sbjct 1162814 GGTTACAGATTCAGTCAAGAGGAAGAGACTTATAATATCGTAATTGCTCATGGTTATTTT 1162755
Query 167805 GGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTG 167864
|| ||| ||||||||||||| | | ||||||| || || | | ||||||||
Sbjct 1162754 GGCCGCTTGATCTTCCAATA-------TGCTACAACTCTCGTTCTTTATATTTCTTCTTA 1162702
Query 167865 GCAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTC 167924
|||| |||||||| ||| ||||||||| |||
Sbjct 1162701 ACAGCTTGGCCTGTAGTTCGTATCTGGTTCACTGCTTTAGGTATTAGCACTATATCTTTC 1162642
Query 167925 AACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCT 167984
||| | || |||||||| |||||| ||||| | ||||||||| ||| || | |
Sbjct 1162641 AACTTAAATGGTTTCAATTTCAACGAGTCTGTAGTTGATAGTTAAGGTTGTGTAATTAAT 1162582
Query 167985 ACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAAT 168044
|| |||| || | | |||| |||| || || |||||| ||||||| || ||||||
Sbjct 1162581 ACGTGGGTTGATATTATTAACCATGCTAACCTTGGAATGGAAATTATGCATGAACGTAAT 1162522
Query 168045 GCTCACAACTTC 168056
||||||||||||
Sbjct 1162521 GCTCACAACTTC 1162510
Score = 98.7 bits (108), Expect = 1e-15
Identities = 105/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 167754 TTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTG 167813
|||||||| || ||||| || || || ||||| |||||||||||||| || ||| | ||
Sbjct 1485115 TTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGGTTGATTG 1485174
Query 167814 ATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGG 167873
|| |||||||| || |||||||||| || | | | |||||||| | | |||
Sbjct 1485175 ATATTCCAATATGCTAGTTTCAACAACTATCGTTTTTTATATTTCTTCTTAACGACTTGG 1485234
Query 167874 CCTGTTGTTGGTATCTGGT 167892
||| | |||||||||||||
Sbjct 1485235 CCTATAGTTGGTATCTGGT 1485253
>seq3301
Length=291840
Score = 138 bits (152), Expect = 1e-27
Identities = 229/327 (70%), Gaps = 3/327 (1%)
Strand=Plus/Minus
Query 167328 TGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGTT 167387
|| |||| |||| | | || || ||||| |||||||||||||||| |||| | |||
Sbjct 13622 TGAGAAGTAGCATTCGTTGATGAATGGTTATACAATGGTGGTCCTTGTGAACTAATTGTT 13563
Query 167388 TTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGT 167447
|| ||||| || || | || || || ||||| ||| ||| |||| || || |
Sbjct 13562 TTACACTTACTTGGTGT-AGCT-TGT-TACATGGGCCGTAAGTAAAAACTTAGTTTCCAT 13506
Query 167448 CTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGCT 167507
|| |||||||||| ||||| ||||||||| || ||| | | || || | ||| |
Sbjct 13505 CTAGGTATGCGTCTGTGGATTACTGTTGCATATTCAGCTTCTATTGCAGCTGTTACTGGT 13446
Query 167508 GTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATC 167567
| ||| | |||| | || ||||| | ||| | ||| | ||| |||| || |||
Sbjct 13445 ATTTTCTTGATCTACTCAATCAGTCAAAGAAGTTTTTATGATGGTATGTCTCTAGGGATC 13386
Query 167568 TCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCC 167627
|||||||| ||||| | |||| |||| || ||| | ||| |||||| || || |||||
Sbjct 13385 TCTGGTACTTTCAATTTCATGATTGTATTTCAAACTGAGTGCAACATTCTTATCCACCCA 13326
Query 167628 TTCCATATGCTCGGCGTTGCTGGCGTA 167654
|| || ||| | ||||| ||| ||||
Sbjct 13325 TTTCACATGTTAGGCGTAGCTTACGTA 13299
>seq3512
Length=3897756
Score = 118 bits (130), Expect = 1e-21
Identities = 229/338 (68%), Gaps = 4/338 (1%)
Strand=Plus/Minus
Query 167553 ATGCCTCTTGGTATCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAAC 167612
|| ||| | || ||||||||||| ||||||| ||| |||| || | ||| |||||
Sbjct 70251 ATACCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTGTGTTTTAGATTGAGGACAAC 70192
Query 167613 ATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTC 167672
|| | |||||| | || || ||| | || | | ||| ||||| || | ||| ||
Sbjct 70191 ATTTTTATGCACACATTTCACATGTTAAGCATAGATGGTGTATTTTATGGCTTTCTATTT 70132
Query 167673 AGTGCAATGCACGGTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAG 167732
||||| ||| | ||||| | || || ||| || | ||||||| |||| |||
Sbjct 70131 AGTGCTATGAATGGTTCCTTAGTAACTTCTATTTTGATCAAGAAAACCACAGAAAATGAA 70072
Query 167733 TCCCAGAACTATGGTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCT 167792
| || | ||||| || || | ||| || ||| | || ||||| | ||||||
Sbjct 70071 TATGCTAATGAAGGTTAAAAATTTGATCAAGAGGAAAAAACTTATAAT----TAGCTGCT 70016
Query 167793 CATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTG 167852
|||||||| | || | |||||||| |||| || ||||||||||| || || |
Sbjct 70015 CATGGTTATGTTGGCCAATTGATCTTCTAATATGCTAGTTTCAACAACTCTCGTTCTTTA 69956
Query 167853 CACTTCTTCTTGGCAGCATGGCCTGTTGTTGGTATCTG 167890
|| |||||||| |||| |||||| | | ||||| ||
Sbjct 69955 CATTTCTTCTTAACAGCTTGGCCTATAATAGGTATTTG 69918
>seq3421
Length=1377396
Score = 109 bits (120), Expect = 6e-19
Identities = 164/231 (71%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 168956 TTTCGGGGTCTCAGCAATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGAC 169015
||| || || |||| || || |||||| | ||||| |||| || || ||||| || ||
Sbjct 145964 TTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTACAGGGGTTTCATAATTGAAC 146023
Query 169016 ACTGAATCCATTTCATATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGC 169075
| |||| ||||||||||||||||| || | ||| | || || || ||| | |||
Sbjct 146024 ATTGAACCCATTTCATATGATGGGAGTTACCGGTGTATTAGGCACTGCTCTGC--TATGC 146081
Query 169076 C--ATTCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACT 169133
| |||||||||| | ||| | |||||| | | | | |||||||| ||||||||
Sbjct 146082 CTTATTCATGGTGCGATCGTAAAAAATACTTTATTTGAGGATGGTGATGGTGCAAATACA 146141
Query 169134 TTCAAAGCATTTGACAGCACTCAGGAAGAGGAGACCTATTCAATGGTTACT 169184
||| | || ||| || | ||| | || || || ||||||||||| |||
Sbjct 146142 TTCCATGCTTTTAACCCAAATCAAGTCGAAGAAACTTATTCAATGGTCACT 146192
>seq2858
Length=30610
Score = 91.5 bits (100), Expect = 2e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 167985 ACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAAT 168044
|||||||| || | | ||||||||| || |||||||||||||| | || ||||||
Sbjct 28612 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATATATGAACGTAAT 28553
Query 168045 GCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 168079
||||||||||||||||| ||||| || |||| |||
Sbjct 28552 GCTCACAACTTCCCTCTAGACCTAGCGGCTGTTGA 28518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560483516993600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |