Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq10784 663 0.0 seq2871 378 8e-100 seq3513 351 1e-91 seq3494 311 1e-79 seq3501 181 1e-40 seq3301 170 2e-37 seq3512 163 3e-35 seq3463 149 7e-31 seq3314 134 2e-26 seq3421 107 2e-18 seq2858 93.3 5e-14 seq199 91.5 2e-13 seq3473 87.8 2e-12 seq3488 84.2 2e-11 >seq10784 Length=1928 Score = 663 bits (734), Expect = 0.0 Identities = 721/951 (76%), Gaps = 8/951 (1%) Strand=Plus/Minus Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGCCGCTACA 164850 ||||||||||| | || ||||| |||||| | |||||||| || | |||| || Sbjct 1801 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1742 Query 164851 ATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGA 164909 | ||| ||||||| |||||||| |||||||| || || || ||||||||||||||||| Sbjct 1741 -TCTGTATTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 1683 Query 164910 ACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTC 164969 |||||| | || |||||| | || || ||||| || || |||||||| | |||| | Sbjct 1682 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1623 Query 164970 TTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAATG 165029 |||| || || || | ||||| || || || |||||||| ||| || | |||||||| Sbjct 1622 TTCTGCAGCTATAGGTTTGCACTTTTACCCGATCTGGGAAGCGGCATCCGTTGATGAATG 1563 Query 165030 GTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGTAGCTTG 165089 ||| ||||| || |||||||| | | |||| | |||||| | | ||||||||||| Sbjct 1562 GTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 1503 Query 165090 CTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGT 165149 ||||||||||||||||||||||| || ||| || ||||||||||| |||||| || Sbjct 1502 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCGTGGATTGCTGT 1443 Query 165150 AGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTTTCGGTCA 165209 |||||| || ||||| || |||||| |||| |||||| || |||| || ||||||| Sbjct 1442 TGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCA 1383 Query 165210 AGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGT 165269 ||| ||||| ||||||||||||||||| || |||||||||||||| |||| ||| | || Sbjct 1382 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 1323 Query 165270 CTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGT 165329 ||||| || || || |||||||||||||| || || |||||| | ||||| ||||| || Sbjct 1322 ATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 1263 Query 165330 ATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCACTCGTCCG 165389 |||||| || || || ||| |||||||||||| | || ||||| | || | Sbjct 1262 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 1203 Query 165390 CGAGACAACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAAGAAGAGAC 165449 || || || |||| || | || | ||||| | || || ||||| ||||| || Sbjct 1202 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 1143 Query 165450 CTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACGCATCCTT 165509 ||||| ||||| ||||| || || || || || || | || |||||||| || || Sbjct 1142 TTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 1083 Query 165510 CAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTATCTGGTT 165569 |||||| || ||||| | || |||||| | || || ||||||||||| ||||||||||| Sbjct 1082 CAACAACTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCTGTAGTAGGTATCTGGTT 1023 Query 165570 CACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTC 165629 ||||||| | ||| ||||||| ||||| |||||||| || |||||||| ||||||||||| Sbjct 1022 CACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAGTC 963 Query 165630 TATTGTTGATAGTC-AGAAC--AAAATCATCCCTACTTGGGCTGACGTTCTGAACCGTGC 165686 | | |||||||||| || | ||| | | ||||||||||| || | |||||||| Sbjct 962 TGTAGTTGATAGTCAAGGTCGTGTAATTAAC---ACTTGGGCTGATATTATTAACCGTGC 906 Query 165687 TGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCCCCCT 165737 | || |||||||||||| ||||| ||||| |||||||||||||| || Sbjct 905 TAACCTTGGTATGGAAGTTTGACATGAACGTAATGCTCACAACTTCCCTCT 855 >seq2871 Length=25858 Score = 378 bits (418), Expect = 8e-100 Identities = 497/687 (72%), Gaps = 15/687 (2%) Strand=Plus/Minus Query 165068 ACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCG 165127 ||||| | | |||||||||| ||||||||||||||||||||||| || ||| || | Sbjct 14632 ACTTCTTATTTGGTGTAGCTTATTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGG 14573 Query 165128 GTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTT 165187 ||||||| || |||||| || |||||| || ||| | | | || ||| Sbjct 14572 GTATGCGCCCATGGATTGCTGTTGCATATTCAGCTCCTATTACAGTTG---------TTT 14522 Query 165188 TCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTG 165247 || || |||| || |||||||||| ||||| ||||||||||||||||| || |||||| Sbjct 14521 TCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTA 14462 Query 165248 GTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCC 165307 ||| ||| |||| ||| | || |||||| | ||||| ||||||||| ||||||| || | Sbjct 14461 GTATTTTCAACTTCATGATTGTATTCCAAACTGAACACAACATTCTTGTGCATCCATTTC 14402 Query 165308 ACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTC 165367 ||||| | ||||| ||||| ||||||||||| || || ||| |||||||| || | Sbjct 14401 ACATGTTAGGCGTAGCTGGTGTATTCGGTGGCTCCCTATTCAGCGCTATGCACGGTTCCC 14342 Query 165368 TTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGGTTATA 165427 | || ||||| | | | || || | |||| || | || | ||||| | Sbjct 14341 TGGTAACTTCTAGTTTGATAAGGGAAACCATAGAAAATGAATCTGCTAATGAAGGTTACA 14282 Query 165428 AGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTC 165487 || || ||||| ||||| || ||||| ||||| | ||| || || || || || Sbjct 14281 GATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGGTGCTCATGGTTATTTTGGCTTAT 14222 Query 165488 TCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCAT 165547 | || |||||||| | |||||||| || | ||| | || |||||| | ||||| | Sbjct 14221 TGATATTCCAATATGTTAGTTTCAACAACTCTCATTCTTTACATTTCTTCTTAGCAGCTT 14162 Query 165548 GGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGA 165607 ||| ||||| |||||||||||||| || | ||| ||||||| ||||| |||||||| | Sbjct 14161 GGCTTGTAGAAAGTATCTGGTTCACTACTTTAGGTATTAGCACTATGGCTTTCAACCTAA 14102 Query 165608 ACGGTTTCAACTTCAACCAGTCTATTGTTGAT-AGTCAGAAC--AAAATCATCCCTACTT 165664 | | ||| || |||||||||| | | |||||| | | || | ||| | | |||| Sbjct 14101 ATGATTTGAATTTCAACCAGTTTGTAGTTGATAATTAAGGTCGTGTAATTAAC---ACTT 14045 Query 165665 GGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTC 165724 ||||||| || |||| |||| | || | |||| ||||||||||||| |||| |||| Sbjct 14044 GGGCTGATATTATGAATCGTGATAACCTTGATATGAAAGTTATGCATGACTGTAATGCTC 13985 Query 165725 ACAACTTCCCCCTCGACCTCGCTGCTG 165751 |||||||||| || ||||| || |||| Sbjct 13984 ACAACTTCCCTCTAGACCTAGCAGCTG 13958 >seq3513 Length=3706331 Score = 351 bits (388), Expect = 1e-91 Identities = 395/525 (75%), Gaps = 3/525 (1%) Strand=Plus/Minus Query 164806 GGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGCCGCTACAATTTGT-TTTATTAC 164864 || ||||| |||||| | |||||||| || | |||| || ||||| ||||||| Sbjct 2689311 GGATGGTTTGGTGTT-TGATGATCCCTACCTTATTGACCGCAACT-TTTGTATTTATTAT 2689254 Query 164865 TGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTC 164924 ||||||||| |||||||| || || || |||||||| |||||| |||| | | || || Sbjct 2689253 TGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGCATTCGTAAACCGATTTCTGGATC 2689194 Query 164925 TCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGG 164984 |||| | || || || || || || ||| |||| | |||| ||||| || || | Sbjct 2689193 TCTACTTTATGGAAATAATATTATTTCTAGTGCCATTATTCCTACTTCTGCAGCTATAAG 2689134 Query 164985 ACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGG 165044 | ||||| || || ||||||||||| ||| || | ||||||||||| ||||| || | Sbjct 2689133 TTTGCACTTTTACCCGATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGA 2689074 Query 165045 TCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGA 165104 |||||| | | |||| | |||||| | | ||||||||||| ||||||| |||||| Sbjct 2689073 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGATCGTGA 2689014 Query 165105 GTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACC 165164 ||| ||||| || ||| || ||||||||||| |||||| || |||||| || || Sbjct 2689013 GTGAGAACTTAGTTTCCGTCTGGGTATGCGTCCGTGGATTGCTGTTGCATATTTAGCTCC 2688954 Query 165165 TGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGA 165224 ||| || |||||| |||| |||||| || |||| || |||||||||| ||||| | ||| Sbjct 2688953 TGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTTTGA 2688894 Query 165225 TGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACA 165284 |||||||||||| || |||||| |||||| |||| ||| | || ||||| || || || Sbjct 2688893 TGGTATGCCTCTAGGAATCTCTAATACTTTCAACTTCATGATTGTATTCCAGGCTGAGCA 2688834 Query 165285 TAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGT 165329 |||||||||||||| || || |||||| | ||||| |||| || Sbjct 2688833 CAACATTCTTATGCACCCATTTCACATGTTAGGCGTAACTGGTGT 2688789 >seq3494 Length=2094846 Score = 311 bits (344), Expect = 1e-79 Identities = 401/551 (73%), Gaps = 8/551 (1%) Strand=Plus/Minus Query 165095 TGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCAT 165154 ||| ||||||||||||||| || ||| || ||||||||| |||||| || |||| Sbjct 1053978 TGGATCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTATGTGGATTGCTGTTGCAT 1053919 Query 165155 ATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATC--CTT--TCGGTCAA 165210 || ||| | || ||| || | || ||||| |||||| ||| |||||||| Sbjct 1053918 ATTCAAGTCCTATTGCAGCTACTACTGCTGTTTTT----TCTATCTACTTAATCGGTCAA 1053863 Query 165211 GGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTC 165270 || ||||| ||||||||||||||||| || |||||||||||||| |||| ||| | || Sbjct 1053862 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTA 1053803 Query 165271 TTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTA 165330 ||| | || || || |||||||||||||| || || |||||| | ||| | ||||| ||| Sbjct 1053802 TTCTAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGCATAGCTGGTGTA 1053743 Query 165331 TTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCACTCGTCCGC 165390 |||| ||| || || ||| |||||| ||||| | | || ||||| | || | Sbjct 1053742 TTCGATGGCTCGCTATTCAGTGCTATACATGGTTCTTTGGTAACTTCTAGTTTGATCAGG 1053683 Query 165391 GAGACAACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAAGAAGAGACC 165450 || || | |||| || | || | ||||| | || || ||||| ||||| || Sbjct 1053682 GAAACCATAGAAAATGAATCTGCTAATGAAGGTTAAAGATTCGGTCAAGAGGAAGAAACT 1053623 Query 165451 TATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACGCATCCTTC 165510 ||||| ||||| |||| || || || || || | | || |||||||| || ||| Sbjct 1053622 TATAATATCGTAGCTGTTCATGGTTATTTTGGCCAATTGATCTTCCAATATGCTAGTTTC 1053563 Query 165511 AACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTATCTGGTTC 165570 ||||| || ||||| | | |||||| | || || ||||||||||| ||||||||||| Sbjct 1053562 AACAACTCTCGTTCTTTATATTTCTTCTTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTA 1053503 Query 165571 ACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCT 165630 |||||| | || ||| ||| ||||| |||||||| || |||||||| |||||||||| | Sbjct 1053502 ACTGCTTTAGGGATTAACACTATGGCCTTCAACCTAAATGGTTTCAATTTCAACCAGTAT 1053443 Query 165631 ATTGTTGATAG 165641 | ||||||| Sbjct 1053442 GTAATTGATAG 1053432 >seq3501 Length=2764102 Score = 181 bits (200), Expect = 1e-40 Identities = 218/297 (73%), Gaps = 7/297 (2%) Strand=Plus/Minus Query 165436 CAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTC 165495 ||||| |||||||| ||||| ||||| ||| || || || || || || | || ||| Sbjct 1162799 CAAGAGGAAGAGACTTATAATATCGTAATTGCTCATGGTTATTTTGGCCGCTTGATCTTC 1162740 Query 165496 CAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTA 165555 ||||| || |||| || ||||| | | |||||| | |||| ||||||||| Sbjct 1162739 CAATATGCT-------ACAACTCTCGTTCTTTATATTTCTTCTTAACAGCTTGGCCTGTA 1162687 Query 165556 GTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTC 165615 ||| ||||||||||||||||| | ||| ||||||| || | |||||| | || |||||| Sbjct 1162686 GTTCGTATCTGGTTCACTGCTTTAGGTATTAGCACTATATCTTTCAACTTAAATGGTTTC 1162627 Query 165616 AACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTACTTGGGCTGACGTT 165675 || |||||| ||||| | ||||||||| | | || ||| |||| ||| || Sbjct 1162626 AATTTCAACGAGTCTGTAGTTGATAGTTAAGGTTGTGTAATTAATACGTGGGTTGATATT 1162567 Query 165676 CTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTC 165732 | |||| |||| || || |||||| |||||||||| ||||| |||||||||||| Sbjct 1162566 ATTAACCATGCTAACCTTGGAATGGAAATTATGCATGAACGTAATGCTCACAACTTC 1162510 Score = 111 bits (122), Expect = 2e-19 Identities = 141/193 (73%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 165430 TTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTC 165489 || || ||||| ||||| || || || ||||| ||||| || || || || ||| | | Sbjct 1485115 TTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGGTTGATTG 1485174 Query 165490 ATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGG 165549 || |||||||| || |||||||| | |||| | | |||||| | | | ||| Sbjct 1485175 ATATTCCAATATGCTAGTTTCAACAACTATCGTTTTTTATATTTCTTCTTAACGACTTGG 1485234 Query 165550 CCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAAC 165609 ||| |||||||||||||||| |||||| | | | ||||||| ||| | |||||| || Sbjct 1485235 CCTATAGTTGGTATCTGGTTTACTGCTTTAGTTATTAGCACTATGAC-TTCAACTAAAAT 1485293 Query 165610 GGTTTCAACTTCA 165622 |||||||| |||| Sbjct 1485294 GGTTTCAATTTCA 1485306 >seq3301 Length=291840 Score = 170 bits (188), Expect = 2e-37 Identities = 233/325 (72%), Gaps = 3/325 (1%) Strand=Plus/Minus Query 165000 TATTTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGT 165059 || ||| |||| ||| | | ||||||||||| ||||| |||||||||| | | | Sbjct 13626 TACTTGAGAAGTAGCATTCGTTGATGAATGGTTATACAATGGTGGTCCTTGTGAACTAAT 13567 Query 165060 TGTCTTCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTA 165119 ||| || ||||| || ||||||||||| |||||||| ||| ||| |||| || Sbjct 13566 TGTTTTACACTTACTT---GGTGTAGCTTGTTACATGGGCCGTAAGTAAAAACTTAGTTT 13510 Query 165120 CCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGC 165179 || || |||||||||| |||||| || |||||| || || | || |||| | | Sbjct 13509 CCATCTAGGTATGCGTCTGTGGATTACTGTTGCATATTCAGCTTCTATTGCAGCTGTTAC 13450 Query 165180 CGCAGTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGG 165239 | ||||| || |||| | || ||||| | ||||| | |||||||||| |||| || Sbjct 13449 TGGTATTTTCTTGATCTACTCAATCAGTCAAAGAAGTTTTTATGATGGTATGTCTCTAGG 13390 Query 165240 TATCTCTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCA 165299 |||||||||||||| || | ||| | || || ||| | || ||||||||||| || Sbjct 13389 GATCTCTGGTACTTTCAATTTCATGATTGTATTTCAAACTGAGTGCAACATTCTTATCCA 13330 Query 165300 TCCGTTCCACATGCTCGGCGTTGCT 165324 || || |||||| | ||||| ||| Sbjct 13329 CCCATTTCACATGTTAGGCGTAGCT 13305 >seq3512 Length=3897756 Score = 163 bits (180), Expect = 3e-35 Identities = 342/508 (67%), Gaps = 5/508 (1%) Strand=Plus/Minus Query 165225 TGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACA 165284 |||||| ||| | || |||||||||||||| |||| |||| | || || | || | Sbjct 70255 TGGTATACCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTGTGTTTTAGATTGAGGA 70196 Query 165285 TAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCT 165344 |||||| ||||||| | || |||||| | || | | ||| ||||| ||| | ||| Sbjct 70195 CAACATTTTTATGCACACATTTCACATGTTAAGCATAGATGGTGTATTTTATGGCTTTCT 70136 Query 165345 TTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAAC 165404 || ||||||| |||| | || ||||| | || | || || |||| Sbjct 70135 ATTTAGTGCTATGAATGGTTCCTTAGTAACTTCTATTTTGATCAAGAAAACCACAGAAAA 70076 Query 165405 AGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGC 165464 || | || | ||||| || |||| ||||| ||| | || ||||| | || Sbjct 70075 TGAATATGCTAATGAAGGTTAAAAATTTGATCAAGAGGAAAAAACTTATAAT----TAGC 70020 Query 165465 TGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTC 165524 ||| || || || | || | | || ||| |||| || |||||||| || ||||| Sbjct 70019 TGCTCATGGTTATGTTGGCCAATTGATCTTCTAATATGCTAGTTTCAACAACTCTCGTTC 69960 Query 165525 GCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGT 165584 | || |||||| | |||| |||||| || | ||||| || | |||||| | | | | Sbjct 69959 TTTACATTTCTTCTTAACAGCTTGGCCTATAATAGGTATTTGTGTTACTGCTTTAGATAT 69900 Query 165585 TAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCA 165644 ||||| ||||| | || | | || | ||| || |||||||| ||| | ||||||||||| Sbjct 69899 TAGCATTATGGCTTACAGCATAAATGCTTT-AATTTCAACCAATCTGTCGTTGATAGTCA 69841 Query 165645 GAACAAAATCATCCCTACTTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGT 165704 || || |||||| ||||| || | ||||||||| || ||||| || | Sbjct 69840 AGGTTGTATAATTAATACTTGAGCTGATATTATTAACCGTGCTAACCTTAGTATGAAAAT 69781 Query 165705 TATGCATGAGCGTAACGCTCACAACTTC 165732 ||||||||| || | |||||||||||| Sbjct 69780 TATGCATGAATGTCATGCTCACAACTTC 69753 >seq3463 Length=1425124 Score = 149 bits (164), Expect = 7e-31 Identities = 191/261 (73%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGCCGCTACA 164850 ||||||||||| | || ||||| |||||| | |||||||| || | |||| || Sbjct 46909 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 46968 Query 164851 ATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGA 164909 | ||| ||||||| ||||||| ||| ||| || | | ||||||||||||||||| Sbjct 46969 -TCTGTATTTATTATCACATTCATTACTGGTCCTCCATTAAATATTGATGGTATTCGTGA 47027 Query 164910 ACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTC 164969 |||||| | | | |||| | || || ||||| || || |||||||| | |||| | Sbjct 47028 ACCTGTTTCTGAATATCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 47087 Query 164970 TTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAATG 165029 |||| || || || | ||||| || || || |||||||| ||| || | |||||||| Sbjct 47088 TTCTGCAGCTATAGGTTTGCACTTTTACCCGATCTGGGAAGCGGCATCCTTTGATGAATG 47147 Query 165030 GTTGTACAACGGTGGTCCTTA 165050 ||| ||||| || |||||||| Sbjct 47148 GTTATACAATGGCGGTCCTTA 47168 >seq3314 Length=478066 Score = 134 bits (148), Expect = 2e-26 Identities = 244/355 (69%), Gaps = 4/355 (1%) Strand=Plus/Plus Query 166484 AATTGGTTTCATGCTTCGGCAGTTTGAAATCGCTCGTCTAGTAGGTATTCGT--CCGTAC 166541 ||| ||||| ||| | | || ||| || | ||||| | || || | || || || Sbjct 267405 AATAGGTTTTATGTTAGGTCAATTTAAACTTGCTCGATT--TATTTAATTGTGACCTTAT 267462 Query 166542 AATGCAATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCT 166601 |||| ||| || || |||||||| |||||| | || ||| | | || | || ||||| Sbjct 267463 AATGTAATTGCATTCTCTGGTCCAATTGCTATTTTTGTTTCTATATTCTTGATTTACCCA 267522 Query 166602 CTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTC 166661 | ||||||| ||||||| || || || ||| || || ||| || | ||||| Sbjct 267523 TTAGGTCAATTTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAACAGTTATAATTTGATTC 267582 Query 166662 CTCCTTTTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTA 166721 |||| || |||| || || || || | |||| ||||| |||||||||||||||| || Sbjct 267583 ATCCTATTTTTTCAGGGGTTTCATAATTAGACATTGAACTCATTTCATATGATGGGAGTT 267642 Query 166722 GCAGGTATTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACT 166781 || ||| | | || | ||| |||| | || || ||||||| ||||||||| || ||| Sbjct 267643 GCCGGTGTATTGGGCGCTGCTCTGCTATACGCTATTCATGGTGCTACAGTAGAAAATACT 267702 Query 166782 CTGTATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAG 166836 | | | |||||||| |||||||| || || || || | ||||||| Sbjct 267703 TCATTTGAGGATGGTGATGGTGCAAATACATTTCGTGCTTTTAACCCAACTCAAG 267757 >seq3421 Length=1377396 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 166634 TTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTGGAC 166693 ||| || || |||| || || |||||| |||| || | || || || || || || || Sbjct 145964 TTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTACAGGGGTTTCATAATTGAAC 146023 Query 166694 ACTGAACCCATTTCATATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTCTGC 166753 | |||||||||||||||||||||| || | ||| | | || ||| ||| | ||| Sbjct 146024 ATTGAACCCATTTCATATGATGGGAGTTACCGGTGTATTAGGCACTGCTCTGC--TATGC 146081 Query 166754 C--ATCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACT 166811 | || ||||||| | ||| | || ||| | | | | |||||||| |||||||| Sbjct 146082 CTTATTCATGGTGCGATCGTAAAAAATACTTTATTTGAGGATGGTGATGGTGCAAATACA 146141 Query 166812 TTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGGTTAC 166861 ||| | || || || | | ||||| |||||||| ||||||||||| || Sbjct 146142 TTCCATGCTTTTAACCCAAATCAAGTCGAAGAAACTTATTCAATGGTCAC 146191 >seq2858 Length=30610 Score = 93.3 bits (102), Expect = 5e-14 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 165661 ACTTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAAC 165720 ||||||||||| || | ||||||||| || |||||||||||||| |||| ||||| Sbjct 28612 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATATATGAACGTAAT 28553 Query 165721 GCTCACAACTTCCCCCTCGACCTCGCTGCTG 165751 |||||||||||||| || ||||| || |||| Sbjct 28552 GCTCACAACTTCCCTCTAGACCTAGCGGCTG 28522 >seq199 Length=6215 Score = 91.5 bits (100), Expect = 2e-13 Identities = 170/247 (69%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGCCGCTACA 164850 ||| ||||||| | || ||||| ||||| | |||||| | || | |||| || Sbjct 6010 AACTGTCTTTACATTGGATGGTTTAGTGTTTTAATGATCTCTACCTTTGTTACCGCAACT 5951 Query 164851 ATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGA 164909 | ||| ||||||| |||||||| | ||||| || | || ||||||||||||||| | Sbjct 5950 -TCTGTATTTATTATCGCATTCATTGTTGCTCTTCCAATAGATATTGATGGTATTCGTAA 5892 Query 164910 ACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTC 164969 | | | | | |||||| | || || ||||| | || |||||| | | |||| | Sbjct 5891 ATTTATTTCTAGATCTCTACTTTATGGAAACAATTTTATTTCTGGTACCATTATTCCTAC 5832 Query 164970 TTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAATG 165029 |||| || || || | ||||| || || || | | |||| ||| || | ||||||| Sbjct 5831 TTCTGCAGCTATAGGTTTGCACTTTTACCCAATCTAGAAAGCGGCATCCGTTGATGAATA 5772 Query 165030 GTTGTAC 165036 ||| ||| Sbjct 5771 GTTATAC 5765 >seq3473 Length=2007359 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/124 (77%), Gaps = 3/124 (2%) Strand=Plus/Plus Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGCCGCTACA 164850 ||||||||||| | || ||||| |||||| | |||||||| ||| | |||| || Sbjct 1590896 AACCGTCTTTACATTGGATGGTTTGGTGTT-TGATGATCCCTACTTTATTGACCGCAACT 1590954 Query 164851 ATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGA 164909 | ||| |||| || |||||||| |||| ||| || || || ||||||||||||||||| Sbjct 1590955 -TCTGTATTTACTATCGCATTCATTGCTGTTCCTCCAGTAGATATTGATGGTATTCGTGA 1591013 Query 164910 ACCT 164913 |||| Sbjct 1591014 ACCT 1591017 >seq3488 Length=2731076 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 167049 TTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCA 167108 ||||| || |||| ||||| || ||||| || || | ||||| ||| |||||||||| Sbjct 1616459 TTTGAGACTTTCTGCACCAAAAATATTCTTTTAAACAAAGGTATTCGTGCTTGGATGGCG 1616400 Query 167109 ACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAAC 167168 || |||| |||||||| | | ||||||||||||||||||| || | || || Sbjct 1616399 GCTCAATATCAGCCTCATGAAAACCTTATATTCCCTGAAGAGGTTCTACCACGTGGAAAT 1616340 Query 167169 GCTCTCTAA 167177 ||||| ||| Sbjct 1616339 GCTCTTTAA 1616331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563535639119360