Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq3257 221 1e-51 seq2933 185 7e-41 seq3419 127 2e-23 seq3470 114 1e-19 seq3403 104 2e-16 seq3496 102 7e-16 seq3510 100 2e-15 seq2794 96.9 3e-14 seq17702 89.7 4e-12 seq3438 89.7 4e-12 >seq3257 Length=220680 Score = 221 bits (244), Expect = 1e-51 Identities = 578/865 (67%), Gaps = 20/865 (2%) Strand=Plus/Minus Query 551735 TGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGA 551794 ||| || ||||||| | | ||||| ||| | ||| || || ||| |||||| Sbjct 20044 TGATGTCTCTCTTCTTACCATTGAAGAGGGTATTTTTGAGGTGAAGGCCACTGCTGGAGA 19985 Query 551795 TTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTA--TCATGGTGTGTTGAAGAT 551852 | || ||||| || ||||||||||| || ||| ||||| ||| | ||| | || Sbjct 19984 CACCCACCTTGGAGGTGAAGATTTTGACAACAGAATGGTAAATCAC--TTCGTTCAGGAG 19927 Query 551853 TTTAAACGAAAAAACAA--AGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAA 551910 ||||| | || ||||| || ||| | | ||| | | ||| ||| | | | | Sbjct 19926 TTTAAGAGGAAGAACAAGAAGGACATCAGTGGAAATCCG--AGAGCACTTAGGAGGTTGA 19869 Query 551911 GAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAG 551970 | |||||||| || ||||| || || | || ||||| | | || || ||||||||| Sbjct 19868 GGACTGCTTGTGAGAGAGCTAAGAGAACCCTCTCATCCACTGCCCAGACTACTATTGAAA 19809 Query 551971 TAGATTCATTATTTGAGGGAATTGA-TTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 | ||||| || | |||||||||||| || || | | || ||| | | || | ||||||| Sbjct 19808 TTGATTCCTTGTATGAGGGAATTGACTTCTACTCCACC-ATTACTCGTGCTAGATTTGAA 19750 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTT-TTAAGAGA 552088 || | ||||| || ||||| || |||||||| || |||| || || || Sbjct 19749 GAACTCAACATGGATCTGTTCAGAAAGTGTATGGAACCAGTTGAG-AAGTGCTTGAGGGA 19691 Query 552089 TTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAAT 552148 | | ||||| || ||| || ||| ||||| | |||||||||||||||||||| ||||| Sbjct 19690 TGCCAAGATGGACAAAAGCACAGTTCATGATGTCGTGCTTGTTGGTGGATCTACTAGAAT 19631 Query 552149 TCCTAAAATTC-GCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTG 552207 ||| || | | || | | || ||| |||||| || || | | || ||| | Sbjct 19630 TCCCAAGGTCCAGCAGCTTTTGCAGGACTT-TTTCAACGGAAAGGAGCT--CTGCAAGAG 19574 Query 552208 --TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265 | || || ||||||||||||||||||||||| || | ||||| |||||| | ||| Sbjct 19573 CATCAACCCTGATGAGGCTGTTGCCTATGGTGCTGCTGTACAAGCTGCTATTTTGAGTGG 19514 Query 552266 ACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325 || | |||| || | || || | | || | ||||| |||||||| |||||||| Sbjct 19513 TGAAGGTAATGAGAAGGTGCAGGATCTCCTGCTGTTGGATGTCACTCCTCTGTCTCTTGG 19454 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | ||||||||| ||| ||| |||||||| | || || || || || ||||| Sbjct 19453 TCTAGAAACAGCTGGTGGTGTTATGACTGTGTTGATTCCCAGGAACACAACCATTCCCAC 19394 Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 || || | || || || || || || || ||||| ||| || ||||| | Sbjct 19393 AAAGAAGGAGCAGGTCTTCTCCACTTACTCCGACAATCAGCCTGGAGTGTTGATTCAGGT 19334 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 | || || || |||| | || || || || ||||| | ||| | || Sbjct 19333 ATACGAGGGTGAGAGAACAAGGACCCGGGACAACAACTTGCTTGGCAAATTTGAACTATC 19274 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT-TACTTTCGATATCGATG 552564 ||| || ||||||||||| | || || || || || ||| | |||| ||||| |||| Sbjct 19273 AGGGATCCCTCCTGCTCCAAGGGGTGTTCCACAGATCACAGTGTGCTTT-GATATTGATG 19215 Query 552565 CCAATGGAATTTTGAATGTGACTGC 552589 | ||||| || |||||||| |||| Sbjct 19214 CTAATGGTATCTTGAATGTCTCTGC 19190 Score = 122 bits (134), Expect = 7e-22 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 550390 AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTAC 550449 ||| | | |||| || | ||||| || ||||| || ||||| ||||||||||| || || Sbjct 20251 AGTGAAGAATGCCGTGGTCACTGTGCCTGCATACTTCAATGATTCACAACGTCAGGCCAC 20192 Query 550450 TAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGC 550509 || ||||| || |||||||| || |||||| | |||||||| ||||||||||| || Sbjct 20191 AAAGGATGCGGGTGTCATTGCTGGCCTCAATGTTATGCGTATTATTAATGAACCTACGGC 20132 Query 550510 TGCTGCACTTGCATATGGACTTGATAA 550536 ||| || |||| ||||| |||||||| Sbjct 20131 TGCAGCCATTGCCTATGGTCTTGATAA 20105 >seq2933 Length=30016 Score = 185 bits (204), Expect = 7e-41 Identities = 370/548 (68%), Gaps = 3/548 (1%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || ||| | || || |||||||||||||| || || |||| ||| | Sbjct 18858 GCCATTGGCATTGATCTGGGTACTACATATAGTTGTGTGGGAGTATGGCTAAACGACCGC 18799 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||| || ||||| ||||| || |||||| | |||||||| ||||||||| |||| || Sbjct 18798 GTTGAGATCATTGCGAATGACCAGGGTAACCGGACTACTCCCTCTTATGTTGCTTTTACA 18739 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || ||||| | | |||| ||||| || || | || | | | || || || Sbjct 18738 GATACTGAGCGGCTCATTGGAGATGCGGCGAAGAACCAGGTCGCCATGAACCCGCAGAAC 18679 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | ||||||||||||||| | ||||||||| | || |||| | |||| ||| Sbjct 18678 ACAGTGTTTGATGCTAAACGTCTGATTGGAAGACGCTTCTCTGATCCTTCTGTGCAGAGC 18619 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTC---TGGAAAACCTTATATTGAA 550288 |||||||||| ||||| || | | || || | || ||||| |||| Sbjct 18618 GATATGAAGCTCTGGCCATTTAAGGTCGTCGCTGGACCAGGTGACAAACCCATGATTGTG 18559 Query 550289 GCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTA 550348 | | || | || | || || |||||| |||| | ||||| || ||||| | Sbjct 18558 GTTCAGCACAAGGGTGAGGAGAAGCAGTTTTCAGCAGAGGAGATTTCTTCAATGGTGCTC 18499 Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408 | || ||||| | | ||| || ||| | |||||| | || | | | || || || Sbjct 18498 ACTAAGATGAAGGAGATTGCCGAGGCCTTTCTAGGTCAAAACGTGAAGAACGCGGTTATT 18439 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || || ||||| ||||| || || | || || ||||||||||| || |||| Sbjct 18438 ACTGTCCCTGCTTATTTCAATGATTCGCAGAGACAGGCGACTAAAGATGCCGGCGCTATT 18379 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 |||| ||||||| | | || || ||||| || || ||||| ||| | || |||||| Sbjct 18378 TCTGGGATTAATGTGATGAGAATCATTAATGAGCCCACGGCTGCCGCAATCGCTTATGGA 18319 Query 550529 CTTGATAA 550536 | ||||| Sbjct 18318 TTGGATAA 18311 Score = 138 bits (152), Expect = 9e-27 Identities = 375/567 (66%), Gaps = 8/567 (1%) Strand=Plus/Minus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTG 551847 || ||| |||| ||||| || |||||||| ||||| ||||| || ||||| | ||||| Sbjct 18195 GGTGATACTCACCTTGGCGGTGAAGATTTCGATAACAGACTTGTGAATCAT--TTTGTTG 18138 Query 551848 AAGATTTTAAACGAAAAAACAAAGTTGATCT-ATCTACATCTGCCAAAGCTCTTCGTCGT 551906 ||| || || | || |||| ||| | | | | ||| | |||||| | | Sbjct 18137 CAGAGTTCAAGAGGAAGCACAAGAAGGATATCAGCGGTAA-TGCAAGAGCTCTGAGAAGG 18079 Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966 | ||||| ||||| || || || || | |||| || || ||||| || || || Sbjct 18078 TTGAGAACAGCTTGTGAGAGGGCTAAGAGGACTCTCTCTTCAACGACTCAGACTACAATA 18019 Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026 ||| | ||||| |||| || || ||||||| || | | || | || || |||| Sbjct 18018 GAAATTGATTCTTTATACGAAGGTATTGATTTCTATTCCACCATAACCAGAGCTCGATTT 17959 Query 552027 GAAGATATTTGTTCTG-ATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAG 552085 || || ||| || || | ||||| ||| || ||||| || || || | | | Sbjct 17958 GAGGA-ATTGAACATGGATTTGTTTAGGAAATGTATGGAACCTGTGGAGAAATGTCTTCG 17900 Query 552086 AGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAG 552145 |||||| ||||||||||| || || ||||| |||| |||||||||||||| ||||| Sbjct 17899 AGATTCGAAGATTGATAAGAGTAATGTTCATGAGGTTGTTCTTGTTGGTGGATCAACAAG 17840 Query 552146 AATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAG 552205 ||||| ||| ||| | ||||| || |||||||| ||| || | | || Sbjct 17839 GATTCCGAAAGTTCAACAGTTGTTACAGGATTTCTTCAATGGAAAAGAACTCTGCAAGAG 17780 Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265 | | || || ||||| ||||| || || || || || | || || || ||| | || Sbjct 17779 TATAAACCCTGATGAAGCTGTCGCGTACGGAGCTGCTGTACAGGCGGCGATTTTGAGCGG 17720 Query 552266 ACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325 || | || || | ||| || || | ||| | ||||||||||||||| ||| || Sbjct 17719 TGAAGGGAACGAGAAGGTTCAAGATCTTCTCCTTCTCGATGTTACTCCTCTAAGTCTCGG 17660 Query 552326 TTTAGAAACAGTTGGAGGTATTATGAC 552352 | ||||| | || || | ||||| Sbjct 17659 AATCGAAACCGCCGGCGGGGTAATGAC 17633 >seq3419 Length=773737 Score = 127 bits (140), Expect = 2e-23 Identities = 165/225 (73%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||| ||||| || || || |||||||| || || |||||||||||| || ||||| Sbjct 377564 CCTAAGACGAAGAACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCTGCAAGAGT 377623 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 | ||||||||| ||||| || ||||| || | ||||||||||| || ||||| || Sbjct 377624 GCGACCATCTTCAAGCTGTTTGCCAGCAAATATCAACCTTTGCTGATCTGGTGGAATACC 377683 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG---TGTGAGTACATTC 563429 ||| || || ||||| ||| ||| || |||||||| |||| | | | || ||| Sbjct 377684 TTCCTTGTCCTGAATCTTTGCTTTGACATTGTCAATTGTGTCAGAACTTTCA--AC-TTC 377740 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || | ||||||||| || || ||||| |||||||| ||||| Sbjct 377741 CAATGTGATAGTTTTACCGGTCAGGGTTTTCACGAAAATCTGCAT 377785 Score = 114 bits (126), Expect = 1e-19 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||| || || || | || ||||| ||| | | ||| || ||||| ||||| |||||| Sbjct 381535 GAGTCGAAGCACCAAGTGTAGGGTTGACTCTTTCTGG--ATGTTGTAGTCAGCAAGAGTT 381592 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 ||| |||||||||||| || || ||||| || | ||||| || || || || ||||| Sbjct 381593 CTTCCATCTTCAAGTTGCTTACCAGCAAATATTAACCTTTGTTGGTCCGGTGGGATTCCC 381652 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 || || ||||||||||| || || ||||| ||||||| | |||| | | Sbjct 381653 TCCTTGTCTTGAATTTTGGCCTTAACATTATCAATGGTATCAGAACTTTCAAATTCCAAA 381712 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| || || ||||| ||||| || || ||||||||||| Sbjct 381713 GTAATGGTCTTTCCAGTGAGAGTCTTCACAAAAATTTGCAT 381753 Score = 111 bits (122), Expect = 1e-18 Identities = 162/224 (72%), Gaps = 10/224 (4%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTC 563314 |||||||| || | || || ||| ||| ||||| ||||| || || || || |||| Sbjct 381308 AGACGGAGCACCAAGTGGAGTGTAGATTCCTTTTGG--ATATTATAGTCTGCAAGGGTTC 381365 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 || ||| ||||| || || || ||||| || || ||||| || || || || || || | Sbjct 381366 TTCCATCCTCAAGCTGCTTACCAGCAAATATGAGCCTTTGTTGGTCTGGTGGGATACCCT 381425 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG---TGTGAGTACATTCGA 563431 | || || || |||||| || || ||||| ||||||| | | | || ||| | Sbjct 381426 CCTTGTCCTGGATTTTTGCCTTGACATTGTCAATAGTATCAGAACTCTCA--AC-TTCCA 381482 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| | ||||| ||||||||||| |||||||||||||||||| Sbjct 381483 AAGTGATGGTTTTCCCAGTAAGAGTCTTAACGAAAATTTGCATA 381526 Score = 107 bits (118), Expect = 2e-17 Identities = 156/216 (72%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAAT 563320 ||||| | || ||||| ||| ||||| || ||||| || || || || | || Sbjct 377119 AGTACCAAGTGGAGGGTGGATTCCTTTTGG--ATGTTGTAGTCTGCAAGGGTACGACCAT 377176 Query 563321 CTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTAT 563380 ||||||| |||||||| ||||| ||||| || |||||||| || || |||||||| |||| Sbjct 377177 CTTCAAGCTGTTTTCCTGCAAAGATAAGCCTCTGCTGATCTGGTGGGATTCCTTCCTTAT 377236 Query 563381 CTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACA 563439 |||| || || |||||| ||||||||||||| | || | | || || | | Sbjct 377237 CTTGGATCTTGGCTTTTACATTGTCAATTGTATCAGAACTCTCGACCTCCAAG-GTTATA 377295 Query 563440 GTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || || || ||||| ||||| || || |||||| Sbjct 377296 GTCTTCCCTGTCAGAGTCTTAACAAATATCTGCATA 377331 Score = 105 bits (116), Expect = 5e-17 Identities = 160/223 (72%), Gaps = 10/223 (4%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 || ||||| |||||||| ||||| ||| | ||| || |||||||| || || || | Sbjct 376657 AGTCGGAGGACAAGATGCAGGGTGGACTCCTTCTGG--ATGTTGTAATCTGCCAGGGTAC 376714 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 | ||| || || || || || ||||| || | || ||||||||||||||||| || | Sbjct 376715 GTCCATCCTCCAGCTGCTTACCTGCAAAGATCAACCTCTGCTGATCAGGAGGAATACCCT 376774 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG---TGTGAGTACATTCGA 563431 |||| ||||| || || ||| || ||||||||||||| | | | || |||| Sbjct 376775 CTTTGTCTTGGATCTTAGCTTTGACATTATCAATTGTATCAGAACTCTCA--AC-CTCGA 376831 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||||| ||||| || || || || || || || || ||||| Sbjct 376832 GAGTAATGGTTTTTCCTGTCAGCGTCTTCACAAATATCTGCAT 376874 Score = 89.7 bits (98), Expect = 4e-12 Identities = 149/210 (71%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| ||||| ||| || || ||| ||||| ||||| || || || |||||| | Sbjct 377352 CAAG-TGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAG-GTCCTGCCATCTTCTA 377409 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 | ||||| || ||||| || | || ||||||||||| || ||||| || || || |||| Sbjct 377410 GCTGTTTGCCCGCAAATATCAACCTCTGCTGATCAGGGGGGATTCCCTCCTTGTCCTGAA 377469 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTA 563445 | || ||| || |||||||| |||| | || ||| || || | ||||| Sbjct 377470 TCTTGGCTTTAACATTATCAATTGTGTCAGAACTCTCCAC-TTCCAGTGTGATGGTTTTC 377528 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| || ||||| || || ||||||||| Sbjct 377529 CCAGTGAGGGTTTTCACAAAGATTTGCATA 377558 >seq3470 Length=1811494 Score = 114 bits (126), Expect = 1e-19 Identities = 436/674 (65%), Gaps = 14/674 (2%) Strand=Plus/Plus Query 551908 TAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTG 551967 |||| ||||| || || | || ||| | ||| | || ||| ||||||| || |||| Sbjct 1708103 TAAGGACTGCATGTGAGCGTGCTAAAAGGGCTTTGTCTTCTACCTCTCAAACGACGATTG 1708162 Query 551968 AAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCT--ATTTCGAGGGCCAAATT 552025 || | ||||| || | || ||||| |||| | |||||| ||| | | || | || Sbjct 1708163 AAATCGATTCTTTGTACGAAGGAATCGATTTT--TACGCCATCATTACACGAGCGAGGTT 1708220 Query 552026 TGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT-TAA 552084 || || | ||| | || ||||| || || || || || |||| | | Sbjct 1708221 CGAGGAACTCAACATGGATTTGTTCAGAAAGTGTATGGAGCCGGTGGAG-AAGTGCATTA 1708279 Query 552085 GAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAA 552144 | || | |||||||| || | || |||| | || || |||||||| || || | Sbjct 1708280 GGGACGCCAAGATTGACAAGAGCCTGGTCAATGAGGTCGTTCTCGTTGGTGGCTCGACGA 1708339 Query 552145 GAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAA 552204 | ||||| ||||||| | || || || |||||| || ||| | | | | | Sbjct 1708340 GGATTCCCAAAATTCAGCAGATTTTGCAGGATTTTTTCAACGGGAAAGAGCTCTGTAAGA 1708399 Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 | | ||||| || || ||||| || ||||| || || ||||||| || || ||| | Sbjct 1708400 GCATAAATCCTGACGAAGCTGTGGCATATGGGGCTGCCGTTCAAGCTGCGATCCTTAGCG 1708459 Query 552265 GACAAACTGATGAAAAACTACAAAATATTGTACTTGTA---GATGTTACTCCTCTATCTC 552321 || || ||| || || | || | ||| ||| || || || || || || || Sbjct 1708460 GAGAAGGTGACGAGAAGGTTCAGGAC-TTG--CTTTTACTCGACGTCACGCCGCTCAGTC 1708516 Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTT-ATCGATAGAAATACTACTATT 552380 | || | ||||||| ||| || | ||||| | | || || ||||||||| || ||| Sbjct 1708517 TCGGGCTTGAAACAGCTGGTGGCGTCATGAC-AGTGTTGATTCCTAGAAATACCACGATT 1708575 Query 552381 CCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440 || ||| ||| | | ||||| || ||||| ||||| ||| ||| |||| || Sbjct 1708576 CCCACTAAGAAAGAACAGATCTTTTCGACTTATTCTGATAACCAATCTGGTGTTTTGATC 1708635 Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500 || ||| ||||||||||||| || | |||||| ||| || || | || | Sbjct 1708636 CAGGTTTACGAAGGAGAAAGAACTCGAACCAGAGATAACCATCTTCTCGGAAAATTCGAG 1708695 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 | || |||||||| || || | |||||||| ||||| | || |||||| || Sbjct 1708696 CTCATTGGCATTCCTCCGGCGCCGAGAGGAGTACCTCAAATCAACGTCTGTTTCGACATT 1708755 Query 552561 GATGCCAATGGAAT 552574 ||||| ||||| || Sbjct 1708756 GATGCAAATGGGAT 1708769 >seq3403 Length=768406 Score = 104 bits (114), Expect = 2e-16 Identities = 102/129 (79%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || ||||| || ||||| || || | || || |||||||||||||||||| Sbjct 478771 ACAGTGCCTGCATACTTCAATGATTCTCAGAGGACGGCAACAAAAGATGCTGGACGTATT 478712 Query 550469 GCTGGACTTA-ATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 ||||| |||| | ||||||||||| |||||||||||||||||||| | | |||||||| Sbjct 478711 GCTGG-CTTAGAAGTTCTTCGTATCATCAATGAACCTACTGCTGCCTCTTTGGCATATGG 478653 Query 550528 ACTTGATAA 550536 |||| || Sbjct 478652 TTTTGAAAA 478644 >seq3496 Length=2546822 Score = 102 bits (112), Expect = 7e-16 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411 || |||||| |||| || |||| | |||| | | |||||| | || || || || Sbjct 417030 AAGATGAAAGAAACTGCGGAGGCTTATCTTGGAAAGGCAGTTACAAAAGCTGTCATCACA 417089 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || ||||| || || |||||| | ||| | ||||| || |||||||| || | ||||| Sbjct 417090 GTCCCAGCTTACTTCAATGACGCGCAAAGACAAGCAACAAAAGATGCAGGGAGAATTGCA 417149 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 || ||| |||| | | || |||||||| || ||||||||||| ||| | ||||| Sbjct 417150 GGCCTTGATGTGCAGAGGATCATCAATGAGCCCACTGCTGCTGCCCTTTCCTATGG 417205 >seq3510 Length=3337861 Score = 100 bits (110), Expect = 2e-15 Identities = 125/170 (74%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 393991 TTCAATGTTATGTTTTGTCACAATTTCATCAAATGTTAAATTCATTGCAATAATTTGTGG 394050 ||||||||| | | ||||||| | ||| | |||| | ||||| |||||| | ||| Sbjct 2305191 TTCAATGTTGTATGGTGTCACAGTCTCAGGATATGTGAGATTCAACGCAATACTCCATGG 2305132 Query 394051 TAGTCCCACTTCATTAAGAGCAATATTTGGATCCGAGGTAATAACTGTACGACCTGACAT 394110 | ||| | ||||| || | || ||||||| | |||||||||||| || |||| | Sbjct 2305131 AACTCCAAGTTCATCAATATTGATGGTTGGATCTGGGGTAATAACTGTCCGTGCTGAAAA 2305072 Query 394111 ATCCACACGTTTTCCCATAAGATTTCCACGAATTCTACCTT-CTTTACCT 394159 |||||||||||||||||| | || || | || ||||||| |||| ||| Sbjct 2305071 ATCCACACGTTTTCCCATCAAGTTACCTCTTATCCTACCTTCCTTTGCCT 2305022 >seq2794 Length=27143 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || ||||| ||||| ||||| ||||| | || || ||||| || || |||||| Sbjct 13688 GCTGTTATCACTGTTCCAGCGTATTTCAATGATGCTCAGCGACAAGCAACGAAGGATGCT 13629 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || | || || || || |||||| | || ||||||||||| |||||||||||||| Sbjct 13628 GGGAGGATCGCCGGTCTAGATGTTCAGAGGATCATCAATGAACCCACTGCTGCTGCACTG 13569 Query 550520 GCATATGG 550527 ||||||| Sbjct 13568 TCATATGG 13561 >seq17702 Length=19512 Score = 89.7 bits (98), Expect = 4e-12 Identities = 133/186 (72%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || || || ||||||| || | ||| ||||| ||||| ||||||||||| || || Sbjct 10962 ATGTTATAGTCAGCTAAGGTGCGACCATCCTCAAGCTGTTTCCCGGCAAAAATGAGCCTC 10903 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || ||||||||||| || ||||| ||||| || ||||| ||||| || ||||| Sbjct 10902 TGTTGATCAGGAGGGATGCCTTCCTTATCCTGGATTTTCGTCTTTACATTGTCTATTGTG 10843 Query 563413 TCAG---TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATT 563469 |||| | | | || || ||||| | || |||||||| || || || || || || Sbjct 10842 TCAGAACTCTCA--AC-CTCCAGAGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGATC 10786 Query 563470 TGCATA 563475 |||||| Sbjct 10785 TGCATA 10780 Score = 87.8 bits (96), Expect = 1e-11 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||||| || || ||||| || ||||| ||||| || ||||||||||| || || Sbjct 10545 CTGAGGCGAAGGACAAGGTGGAGGGTGGACTCTTTCTGTATGTTGTAATCAGCAAGGGTA 10486 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | ||| || || || || ||||| || ||||| || ||||| |||||||| || ||| Sbjct 10485 CGACCATCCTCGAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCAGGAGGGATGCCT 10426 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 ||||| || ||||| || || || |||| || |||| | | || ||| Sbjct 10425 TCTTTGTCCTGAATCTTCGCCTTGACGTTATCAACGGTGTCAGAGCTCTCAACCTCAAGA 10366 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | || || || || |||||||| || || || ||||| Sbjct 10365 GTGATGGTCTTGCCGGTGAGAGTTTTTACAAAGATCTGCAT 10325 Score = 86.0 bits (94), Expect = 5e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||||| || || ||||| || ||||| ||||| || ||||||||||| || || Sbjct 10773 CTGAGGCGAAGGACAAGGTGGAGGGTGGACTCTTTCTGTATGTTGTAATCAGCAAGGGTG 10714 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | ||| || || || || ||||| || ||||| || ||||| |||||||| || ||| Sbjct 10713 CGACCATCCTCGAGCTGCTTGCCGGCGAATATAAGCCTCTGCTGGTCAGGAGGGATGCCT 10654 Query 563374 TCTTTATCTTGAATTTT 563390 ||||| || ||||| || Sbjct 10653 TCTTTGTCCTGAATCTT 10637 >seq3438 Length=1145226 Score = 89.7 bits (98), Expect = 4e-12 Identities = 109/147 (74%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 930664 TTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCA 930723 |||| ||||| ||||| ||||||||||||||||||||| |||| || || || ||||| | Sbjct 312846 TTGACTTTTCATCACCCAATATTGCCAAAGAAATGCATGTTGGTCACTTACGATCTACTA 312905 Query 930724 TTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAG--TAAAGTTCATCGAGT 930781 ||||||| || | ||| | | || ||| || | ||| | | |||| ||| Sbjct 312906 TTATTGGTGACACGTTAGCTCGTTTGCTTGA--GTTCTCAAAGGTTGACGTTCTACGACG 312963 Query 930782 CAATCATATTGGTGATTGGGGAACACA 930808 || ||| ||||||||||||| ||||| Sbjct 312964 AAACCATGTTGGTGATTGGGGGACACA 312990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028356559564360