Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq10784 560 3e-155 seq2871 316 6e-82 seq3513 273 7e-69 seq3494 244 3e-60 seq3463 145 2e-30 seq3512 141 3e-29 seq3501 127 6e-25 seq3301 120 9e-23 seq2858 102 2e-17 seq3473 93.3 1e-14 seq199 89.7 2e-13 >seq10784 Length=1928 Score = 560 bits (620), Expect = 3e-155 Identities = 711/976 (73%), Gaps = 4/976 (0%) Strand=Plus/Plus Query 5204 AGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTGGCACGGTTC 5263 || ||||||||||||||||| ||||| || ||||||||||||||||| |||||||| Sbjct 855 AGAGGGAAGTTGTGAGCATTACGTTCATGTCAAACTTCCATACCAAGGTTAGCACGGTTA 914 Query 5264 AGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGACTGATTGAAG 5323 | | ||| ||||||||| || | | ||| | ||||| || ||||| ||||| Sbjct 915 ATAATATCAGCCCAAGTGTTAATTACACGACCTTGACTATCAACTACAGACTGGTTGAAA 974 Query 5324 TTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATGCAA 5383 || || || || || || |||||||||||| || || | || || | ||| || | Sbjct 975 TTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAACCAGATACCT 1034 Query 5384 ACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATAC 5443 || || ||||||| || | ||||||||||||| ||| ||||| || |||||||| Sbjct 1035 ACTACAGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGAAACTAGCATAT 1094 Query 5444 TGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCT 5503 |||||||| | || ||||| || |||||||| || || || ||||| |||||||||||| Sbjct 1095 TGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTTTCTTCCTCT 1154 Query 5504 TGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACGAATGAGCGAA 5563 || |||||| | || || | || ||| | | || ||||| | || | | Sbjct 1155 TGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTA 1214 Query 5564 GAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATACCCCAGCAACA 5623 ||||| || | |||||||||||| ||| | | || |||||||| ||||| || Sbjct 1215 GAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACG 1274 Query 5624 CCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATACGAACATAAAG 5683 || | |||||| || || |||||||| || ||||| || ||||||||||| | ||| ||| Sbjct 1275 CCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGCCTGGAATACAATCATGAAG 1334 Query 5684 TTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCCTGTCCGAAAGGG 5743 || |||||||||||||| || ||||||||||||||| |||||||| || |||| ||| Sbjct 1335 TTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGG 1394 Query 5744 TATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAATATGCTACGCAAATCCAT 5803 || | || || || | | || || ||||| || ||||||||||| || |||||| Sbjct 1395 TAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAC 1454 Query 5804 GGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTAAGCTGCGATACCA 5863 || ||||| || | | | ||||||||||||| | || |||| |||| || | |||| Sbjct 1455 GGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTACACCA 1514 Query 5864 ATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCATTCATCGA-- 5921 | | |||||| | || | |||| || || || |||||||| | ||||||||| | Sbjct 1515 AGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCATTGTATAACCATTCATCAACG 1574 Query 5922 GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGAGCTGGGTACAA 5981 ||| || ||||||||||| || || ||||| || || || || || | || | || Sbjct 1575 GAT--GCCGCTTCCCAGATCGGGTAAAAGTGCAAACCTATAGCTGCAGAAGTAGGAATAA 1632 Query 5982 CGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTCACGTATGC 6041 ||| || || || || ||||||||||| ||||||||||| | || |||||||| || | Sbjct 1633 TGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCACGAATAC 1692 Query 6042 CGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGTTGCGGTTA 6101 | || || || ||||| || ||||| | |||||| | |||||| ||| ||||||||| | Sbjct 1693 CATCAATATCTACTGGAGGAGCAGCAATGAATGCGATAATAAATACAGAAGTTGCGGTCA 1752 Query 6102 AGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTTGGTGCTAG 6161 | | | || ||||| || ||||||||||| || | || || ||||| | ||||| | Sbjct 1753 ATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTGCTGG 1812 Query 6162 TAACCCAGTCACAGAA 6177 | | ||||| |||||| Sbjct 1813 TTATCCAGTTACAGAA 1828 >seq2871 Length=25858 Score = 316 bits (350), Expect = 6e-82 Identities = 482/688 (70%), Gaps = 9/688 (1%) Strand=Plus/Plus Query 5186 TCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATA 5245 ||| |||||||||| || || ||||||||||||||||| | || ||||| |||| |||| Sbjct 13954 TCAACAGCTGCTAGGTCTAGAGGGAAGTTGTGAGCATTACAGTCATGCATAACTTTCATA 14013 Query 5246 CCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCA 5305 ||||||| |||| |||| | ||| ||||||||| || | | ||| | ||| Sbjct 14014 TCAAGGTTATCACGATTCATAATATCAGCCCAAGTGTTAATTACACGACCTTAATTATCA 14073 Query 5306 ACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATA 5365 || || |||| ||||| || || | || || || |||||||||||| || || | | Sbjct 14074 ACTACAAACTGGTTGAAATTCAAATCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAA 14133 Query 5366 GAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTA 5425 | || | ||| || | | || |||||| || | ||||||||||||| | | Sbjct 14134 GTAGTGAACCAGATACTTTCTACAAGCCAAGCTGCTAAGAAGAAATGTAAAGAATGAGAG 14193 Query 5426 TTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 5485 ||||| || ||| |||| ||||| || | | ||||| || |||||||| | || || Sbjct 14194 TTGTTGAAACTAACATATTGGAATATCAATAAGCCAAAATAACCATGAGCACCTACGATA 14253 Query 5486 TTATACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTT 5545 ||||| |||||||||||||| |||||| | || || | || ||| | | | Sbjct 14254 TTATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTATG 14313 Query 5546 GTTTCACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCA 5605 ||||| | || | |||||| || || || |||||||| ||| | | ||| Sbjct 14314 GTTTCCCTTATCAAACTAGAAGTTACCAGGGAACCGTGCATAGCGCTGAATAGGGAGCCA 14373 Query 5606 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCC 5665 |||||||| ||||| || || | |||||| || ||||||| ||| || |||||||| | Sbjct 14374 CCGAATACACCAGCTACGCCTAACATGTGAAATGGATGCACAAGAATGTTGTGTTCAGTT 14433 Query 5666 TGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAA 5725 |||||||| | ||| ||||| ||| ||| |||||| || ||||||||||||||| ||| Sbjct 14434 TGGAATACAATCATGAAGTTGAAAATACTAGAGATTCCTAGAGGCATACCATCAGAAAAA 14493 Query 5726 CTTCCCTGTCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAA 5785 ||||| || |||| ||||| | || || | | | | || || |||||| Sbjct 14494 CTTCCTTGACCGATTGGGTAGATCAAGAAAA---------CAACTGTAATAGGAGCTGAA 14544 Query 5786 TATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCC 5845 ||||| || ||||||||| ||||| || | | | ||||||||||||| | || ||| Sbjct 14545 TATGCAACAGCAATCCATGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 14604 Query 5846 AAGTAAGCTGCGATACCAATAAGGAAGT 5873 | |||| || | ||||| | ||||| Sbjct 14605 ATGTAATAAGCTACACCAAATAAGAAGT 14632 >seq3513 Length=3706331 Score = 273 bits (302), Expect = 7e-69 Identities = 378/526 (72%), Gaps = 5/526 (1%) Strand=Plus/Plus Query 5612 ACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAAT 5671 || |||| || || | |||||| || || |||||||| || ||||| || ||||||||| Sbjct 2688789 ACACCAGTTACGCCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGCCTGGAAT 2688848 Query 5672 ACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCC 5731 || | ||| ||||| |||||| |||||| || ||||||||||||||| |||||||| Sbjct 2688849 ACAATCATGAAGTTGAAAGTATTAGAGATTCCTAGAGGCATACCATCAAAAAAACTTCCT 2688908 Query 5732 TGTCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAATATGCT 5791 || |||| ||||| | || || || | | || || ||||| || ||| ||||||| Sbjct 2688909 TGACCGATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTAAATATGCA 2688968 Query 5792 ACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTAA 5851 || |||||| || ||||| || | | | |||||||||| || | || ||| |||| Sbjct 2688969 ACAGCAATCCACGGACGCATACCCAGACGGAAACTAAGTTCTCACTCACGATCCATGTAA 2689028 Query 5852 GCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGC 5911 || | ||||| | |||||| | || | |||| || || | |||||||| | | Sbjct 2689029 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGATCGCCATTGTATAAC 2689088 Query 5912 CATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGG 5969 |||||||| | ||| || |||||||| || || || ||||| || | || || | Sbjct 2689089 CATTCATCAACGGAT--GCCGCTTCCCAAATCGGGTAAAAGTGCAAACTTATAGCTGCAG 2689146 Query 5970 AGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGG 6029 | | || | || ||| | || || || || |||||||| ||||||||||| | | | Sbjct 2689147 AAGTAGGAATAATGGCACTAGAAATAATATTATTTCCATAAAGTAGAGATCCAGAAATCG 2689206 Query 6030 GTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAG 6089 ||| ||| ||||| || || || ||||| || ||||| | |||||| | |||||| || Sbjct 2689207 GTTTACGAATGCCATCAATATCTACTGGAGGAGCAGCAATGAATGCAATAATAAATACAA 2689266 Query 6090 TAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCC 6135 ||||||||| || | | || ||||| || ||||||||||| || Sbjct 2689267 AAGTTGCGGTCAATAAGGTAGGGATCATCAA-ACACCAAACCATCC 2689311 >seq3494 Length=2094846 Score = 244 bits (270), Expect = 3e-60 Identities = 378/537 (70%), Gaps = 2/537 (0%) Strand=Plus/Plus Query 5313 ACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAA 5372 |||| ||||| || || || || || || || ||||||||| || || | || || | Sbjct 1053445 ACTGGTTGAAATTGAAACCATTTAGGTTGAAGGCCATAGTGTTAATCCCTAAAGCAGTTA 1053504 Query 5373 GCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAA 5432 ||| || | || || ||||||| || | |||||||| |||| ||| ||||| | Sbjct 1053505 ACCAGATACCTACTACAGGCCAAGCCGCTAAGAAGAAATATAAAGAACGAGAGTTGTTGA 1053564 Query 5433 AGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACG 5492 | |||||||| |||||||| | | ||||| || |||||| | || || || ||||| | Sbjct 1053565 AACTAGCATATTGGAAGATCAATTGGCCAAAATAACCATGAACAGCTACGATATTATAAG 1053624 Query 5493 TTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCAC 5552 ||||||||||||| |||||| | || || | || ||| | | | ||||| | Sbjct 1053625 TTTCTTCCTCTTGACCGAATCTTTAACCTTCATTAGCAGATTCATTTTCTATGGTTTCCC 1053684 Query 5553 GAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATA 5612 || | |||||| || | | ||||| |||||| ||| | | ||| |||||| Sbjct 1053685 TGATCAAACTAGAAGTTACCAAAGAACCATGTATAGCACTGAATAGCGAGCCATCGAATA 1053744 Query 5613 CCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATA 5672 | ||||| | || | |||||| || || |||||||| || ||||| || |||| ||||| Sbjct 1053745 CACCAGCTATGCCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGCCTAGAATA 1053804 Query 5673 CGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCCT 5732 | | ||| ||||| |||||||||||||| || ||||||||||||||| |||||||| | Sbjct 1053805 CAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTT 1053864 Query 5733 GTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATGCT 5791 | |||| ||| | |||| || | |||| | || |||| || ||||||||| Sbjct 1053865 GACCGATTAAGTAGATAGAAAAAACAGCAGTA-GTAGCTGCAATAGGACTTGAATATGCA 1053923 Query 5792 ACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAG 5848 || |||||| ||||| || | | | ||||||||||||| | || ||||| Sbjct 1053924 ACAGCAATCCACATACGCATACCCAGACGGAAACTAAGTTCCCACTCACGATCCAAG 1053980 >seq3463 Length=1425124 Score = 145 bits (160), Expect = 2e-30 Identities = 220/311 (71%), Gaps = 4/311 (1%) Strand=Plus/Minus Query 5869 GAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCATTCATCGA--GATTG 5926 |||||| | || | |||| || || || |||||||| | ||||||||| | ||| Sbjct 47190 GAAGTGTAGAACAATTAGTTCATAAGGACCGCCATTGTATAACCATTCATCAAAGGAT-- 47133 Query 5927 GCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGAGCTGGGTACAACGGCT 5986 || ||||||||||| || || ||||| || || || || || | || | || ||| Sbjct 47132 GCCGCTTCCCAGATCGGGTAAAAGTGCAAACCTATAGCTGCAGAAGTAGGAATAATGGCA 47073 Query 5987 CCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCG 6046 || || || || ||||||||||| |||||| || | | || |||||||| || || || Sbjct 47072 CCAGAAATAATATTGTTTCCATAAAGTAGATATTCAGAAACAGGTTCACGAATACCATCA 47013 Query 6047 ATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGT 6106 || | | ||| || ||| | ||||| | |||||| ||| ||||||||| || | Sbjct 47012 ATATTTAATGGAGGACCAGTAATGAATGTGATAATAAATACAGAAGTTGCGGTCAATAAG 46953 Query 6107 GCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTTGGTGCTAGTAACC 6166 | || ||||| || ||||||||||| || | || || ||||| | ||||| || | Sbjct 46952 GTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTGCTGGTTATT 46893 Query 6167 CAGTCACAGAA 6177 |||| |||||| Sbjct 46892 CAGTTACAGAA 46882 >seq3512 Length=3897756 Score = 141 bits (156), Expect = 3e-29 Identities = 337/508 (66%), Gaps = 5/508 (1%) Strand=Plus/Plus Query 5209 GAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTGGCACGGTTCAGGAC 5268 |||||||||||||| | ||| ||||| | || ||||| |||||| |||||||| | | Sbjct 69753 GAAGTTGTGAGCATGACATTCATGCATAATTTTCATACTAAGGTTAGCACGGTTAATAAT 69812 Query 5269 ATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGACTGATTGAAGTTAAA 5328 ||| || ||||| || || | ||| | |||||||| || || ||||| ||||| Sbjct 69813 ATCAGCTCAAGTATTAATTATACAACCTTGACTATCAACGACAGATTGGTTGAAATTAAA 69872 Query 5329 GCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATGCAAACGAC 5388 || ||| | | |||||||| || || | | || |||| || || | | | Sbjct 69873 GCATTTATG-CTGTAAGCCATAATGCTAATATCTAAAGCAGTAACACAAATACCTATTAT 69931 Query 5389 GGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAA 5448 ||||||| | | ||||||||||||| ||| ||||| || |||||||| | ||| Sbjct 69932 AGGCCAAGCTGTTAAGAAGAAATGTAAAGAACGAGAGTTGTTGAAACTAGCATATTAGAA 69991 Query 5449 GATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCC 5508 ||| | | |||| || |||||||| || | ||||| |||| ||||||||| | Sbjct 69992 GATCAATTGGCCAACATAACCATGAGCAGCTA----ATTATAAGTTTTTTCCTCTTGATC 70047 Query 5509 GAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACGAATGAGCGAAGAAGT 5568 ||||| || || | || | | | | || |||| || | |||||| Sbjct 70048 AAATTTTTAACCTTCATTAGCATATTCATTTTCTGTGGTTTTCTTGATCAAAATAGAAGT 70107 Query 5569 AACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATACCCCAGCAACACCGAG 5628 || | |||| ||||||| || | | ||| ||||| ||| | | | | Sbjct 70108 TACTAAGGAACCATTCATAGCACTAAATAGAAAGCCATAAAATACACCATCTATGCTTAA 70167 Query 5629 CATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATACGAACATAAAGTTAAA 5688 |||||| || | ||||||| || |||| || || || || | ||||||||| || Sbjct 70168 CATGTGAAATGTGTGCATAAAAATGTTGTCCTCAATCTAAAACACAATCATAAAGTTGAA 70227 Query 5689 AGTACCAGAGATACCAAGAGGCATACCA 5716 |||||||||||| || | ||| |||||| Sbjct 70228 AGTACCAGAGATTCCTAAAGGTATACCA 70255 >seq3501 Length=2764102 Score = 127 bits (140), Expect = 6e-25 Identities = 216/312 (69%), Gaps = 7/312 (2%) Strand=Plus/Plus Query 5209 GAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTGGCACGGTTCAGGAC 5268 ||||||||||||||| ||||| ||||| | |||||| |||||||| ||| |||| | | Sbjct 1162510 GAAGTTGTGAGCATTACGTTCATGCATAATTTCCATTCCAAGGTTAGCATGGTTAATAAT 1162569 Query 5269 ATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGACTGATTGAAGTTAAA 5328 ||| |||| || || | | ||| | ||||| || |||| ||||| || || Sbjct 1162570 ATCAACCCACGTATTAATTACACAACCTTAACTATCAACTACAGACTCGTTGAAATTGAA 1162629 Query 5329 GCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATGCAAACGAC 5388 || || | || |||| |||||| || || | || || | ||| || | ||| || Sbjct 1162630 ACCATTTAAGTTGAAAGATATAGTGCTAATACCTAAAGCAGTGAACCAGATACGAACTAC 1162689 Query 5389 GGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAA 5448 ||||||| | | |||||||| |||| ||| | ||| ||||||| ||||| Sbjct 1162690 AGGCCAAGCTGTTAAGAAGAAATATAAAGAACG---AGAGTT----GTAGCATATTGGAA 1162742 Query 5449 GATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCC 5508 ||| | | ||||| || |||||||| || || ||||| || ||||||||||| | Sbjct 1162743 GATCAAGCGGCCAAAATAACCATGAGCAATTACGATATTATAAGTCTCTTCCTCTTGACT 1162802 Query 5509 GAATTTATATCC 5520 |||| | || || Sbjct 1162803 GAATCTGTAACC 1162814 Score = 102 bits (112), Expect = 2e-17 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 5343 AAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCA 5402 ||| ||||||| || | | || |||| ||| || | ||| | |||||||| | | Sbjct 1485283 AAGTCATAGTGCTAATAACTAAAGCAGTAAACCAGATACCAACTATAGGCCAAGTCGTTA 1485224 Query 5403 GGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAA 5462 |||||||| |||| ||| ||||| || |||||||| ||||| || | || |||| Sbjct 1485223 AGAAGAAATATAAAAAACGATAGTTGTTGAAACTAGCATATTGGAATATCAATCAACCAA 1485164 Query 5463 AGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCCGAA 5511 | || |||||||| || || || || || |||||||||||||| ||||| Sbjct 1485163 AATAACCATGAGCAGCTACGATATTGTAAGTTTCTTCCTCTTGACCGAA 1485115 >seq3301 Length=291840 Score = 120 bits (132), Expect = 9e-23 Identities = 212/305 (70%), Gaps = 7/305 (2%) Strand=Plus/Plus Query 5617 AGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATACGAA 5676 ||| || || | |||||| || || || ||||| || ||| || | || ||||| | Sbjct 13305 AGCTACGCCTAACATGTGAAATGGGTGGATAAGAATGTTGCACTCAGTTTGAAATACAAT 13364 Query 5677 CATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCCTGTCC 5736 ||| || || |||||||||||||| || |||| |||||||||| ||||||| || | Sbjct 13365 CATGAAATTGAAAGTACCAGAGATCCCTAGAGACATACCATCATAAAAACTTCTTTGACT 13424 Query 5737 GAAAGGGTATACTA--AAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAATATGCTACG 5794 || | ||| | | ||||||| |||| | || |||| | ||||||||||| || Sbjct 13425 GATTGAGTAGATCAAGAAAATAC-CAGTA-ACAGCTGCAATAGAAGCTGAATATGCAACA 13482 Query 5795 CAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTAAGCT 5854 |||||| | ||||| |||| | ||||||||| | | || |||| |||| Sbjct 13483 GTAATCCACAGACGCATACCTAGATGGAAACTAAGTTTTTACTTACGGCCCATGTAACAA 13542 Query 5855 GCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCAT 5914 || | ||| ||| ||||| || || | |||| | || || |||||||| | |||| Sbjct 13543 GCTACACC---AAGTAAGTGTAAAACAATTAGTTCACAAGGACCACCATTGTATAACCAT 13599 Query 5915 TCATC 5919 ||||| Sbjct 13600 TCATC 13604 >seq2858 Length=30610 Score = 102 bits (112), Expect = 2e-17 Identities = 80/96 (83%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 5186 TCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATA 5245 ||| |||| ||||| || || ||||||||||||||||| ||||| | || ||||||||| Sbjct 28518 TCAACAGCCGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATATATAACTTCCATA 28577 Query 5246 CCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTG 5281 |||||||| |||||||| | | ||| ||||||||| Sbjct 28578 CCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTG 28613 >seq3473 Length=2007359 Score = 93.3 bits (102), Expect = 1e-14 Identities = 131/183 (72%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 5995 GATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCGATGTCGAC 6054 |||| | || |||| ||||||||| | | | |||||||| || || || || || || Sbjct 1591050 GATGCCGCTTTCATAAAGTAGAGATTCAGAAATAGGTTCACGAATACCATCAATATCTAC 1590991 Query 6055 TGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTAT 6114 ||| || |||| | |||||| | ||||| ||| ||||||||| || | | || || Sbjct 1590990 TGGAGGAACAGCAATGAATGCGATAGTAAATACAGAAGTTGCGGTCAATAAAGTAGGGAT 1590931 Query 6115 CATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTTGGTGCTAGTAACCCAGTCACA 6174 ||| || ||||||||||| || | || || ||||| | ||||| || | ||| | || Sbjct 1590930 CATCAA-ACACCAAACCATCCAATGTAAAGACGGTTTTCAGTGCTGGTTATCCATTTGCA 1590872 Query 6175 GAA 6177 ||| Sbjct 1590871 GAA 1590869 >seq199 Length=6215 Score = 89.7 bits (98), Expect = 2e-13 Identities = 186/275 (68%), Gaps = 4/275 (1%) Strand=Plus/Plus Query 5905 GTAAAGCCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATT 5962 ||| | | ||||||| | ||| || |||| | |||| || || ||||| || || || Sbjct 5765 GTATAACTATTCATCAACGGAT--GCCGCTTTCTAGATTGGGTAAAAGTGCAAACCTATA 5822 Query 5963 GCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCT 6022 || || | || | || || || || || | ||||||||||| |||||||||| Sbjct 5823 GCTGCAGAAGTAGGAATAATGGTACCAGAAATAAAATTGTTTCCATAAAGTAGAGATCTA 5882 Query 6023 GCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATA 6082 | | || ||| || || || || || | ||| | ||| | | |||||| | ||| Sbjct 5883 GAAATAAATTTACGAATACCATCAATATCTATTGGAAGAGCAACAATGAATGCGATAATA 5942 Query 6083 AATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAG 6142 ||| ||| ||||||||| | | | | |||||||| |||| |||||| || | || Sbjct 5943 AATACAGAAGTTGCGGTAACAAAGGTAGAGATCATTAAAACACTAAACCATCCAATGTAA 6002 Query 6143 AGGCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 || | ||| | ||||||| | ||| | |||||| Sbjct 6003 AGACAGTTTTCAATGCTAGTTATCCAATTACAGAA 6037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152617398948504