Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06]
17,764 sequences; 369,781,828 total letters
Query= NC_019516.1
Length=161440
Score E
Sequences producing significant alignments: (Bits) Value
seq10784 616 2e-171
seq3513 324 1e-83
seq3494 316 2e-81
seq2871 298 6e-76
seq3405 185 9e-42
seq3314 149 6e-31
seq3463 138 1e-27
seq3501 118 1e-21
seq3421 87.8 2e-12
>seq10784
Length=1928
Score = 616 bits (682), Expect = 2e-171
Identities = 708/950 (75%), Gaps = 2/950 (0%)
Strand=Plus/Minus
Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGCTTCATTAC 8348
|| |||||||| ||| | |||||||| ||| || ||| |||| || | || ||||
Sbjct 1786 GGATGGTTTGGTGTTTTGATGATCCCTACC-TTATTGACCGCAACTTCTGTATTTATTAT 1728
Query 8349 CGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATC 8408
||||||| ||||||||||||| || || || || || || || ||||| ||| |||||||
Sbjct 1727 CGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 1668
Query 8409 TCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGG 8468
||| | || || ||||| || || |||||||| || |||| | ||| || || ||
Sbjct 1667 TCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGG 1608
Query 8469 CCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGG 8528
| ||||| ||||| ||||||||||| || || ||||||| ||| | ||||| || ||
Sbjct 1607 TTTGCACTTTTACCCGATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGG 1548
Query 8529 TCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGA 8588
|||||| | || | ||| | |||||| | ||||| || | ||| |||||||||||
Sbjct 1547 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGA 1488
Query 8589 ATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCC 8648
||||||||| || ||| || || |||||||| ||||| ||||||||| || |||||
Sbjct 1487 GTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCGTGGATTGCTGTTGCATATTCAGCTCC 1428
Query 8649 TGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGA 8708
|||||| |||||| | ||||| ||| | |||| || | |||||||| || |||||
Sbjct 1427 TGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGA 1368
Query 8709 TGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCA 8768
|||||||||||| || ||||| ||||| ||||||| ||| |||| ||||||||||||||
Sbjct 1367 TGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCA 1308
Query 8769 CAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCT 8828
|||||| || |||||||| || |||||| | || || |||||||| |||||||| || ||
Sbjct 1307 CAACATTCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCT 1248
Query 8829 CTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAC 8888
|| || ||||||||||| | || |||||| || | | || ||||| ||||
Sbjct 1247 ATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAA 1188
Query 8889 CGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGC 8948
|| ||| || | || |||| ||||||||||| || |||||||| || || || ||
Sbjct 1187 TGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGC 1128
Query 8949 CGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAG 9008
|||||||| || ||||| || ||||||||||||||||| ||| ||||| ||| |
Sbjct 1127 TGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTC 1068
Query 9009 CTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGT 9068
|| ||||||||| | || || |||||||| || || |||||||| || || | || |
Sbjct 1067 TTTACATTTCTTCTTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTAT 1008
Query 9069 CTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACA 9128
|| |||||||||||||| ||||| ||||| ||||||||||| | | || | ||
Sbjct 1007 TAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAGTCTGTAGTTGATAGTCA 948
Query 9129 AGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGT 9188
||| || || | ||||| ||||| || | ||||||| || || |||||||||||
Sbjct 947 AGGTCGTGTAATTAACACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGT 888
Query 9189 CATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCTGCTG 9238
|| ||| | || || ||||||||||| || ||| | |||||| ||
Sbjct 887 TTGACATGAACGTAATGCTCACAACTTCCCTCTACACCCTCCGGCTGTTG 838
>seq3513
Length=3706331
Score = 324 bits (358), Expect = 1e-83
Identities = 389/525 (74%), Gaps = 3/525 (1%)
Strand=Plus/Minus
Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGCTTCATTAC 8348
|| |||||||| ||| | |||||||| ||| || ||| |||| || || || ||||
Sbjct 2689311 GGATGGTTTGGTGTT-TGATGATCCCTACC-TTATTGACCGCAACTTTTGTATTTATTAT 2689254
Query 8349 CGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATC 8408
|||||| ||||||||||||| || || || || ||||| || |||| || |||||||
Sbjct 2689253 TGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGCATTCGTAAACCGATTTCTGGATC 2689194
Query 8409 TCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGG 8468
||| | || || || || || || ||| |||| || |||| | ||| || || |
Sbjct 2689193 TCTACTTTATGGAAATAATATTATTTCTAGTGCCATTATTCCTACTTCTGCAGCTATAAG 2689134
Query 8469 CCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGG 8528
| ||||| ||||| || |||||||| || || ||||||| ||| | ||||| || |
Sbjct 2689133 TTTGCACTTTTACCCGATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGA 2689074
Query 8529 TCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGA 8588
|||||| | || | ||| | |||||| | ||||| || | ||| |||| ||||||
Sbjct 2689073 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGATCGTGA 2689014
Query 8589 ATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCC 8648
|| |||||| || ||| || || |||||||| ||||| ||||||||| | |||||
Sbjct 2689013 GTGAGAACTTAGTTTCCGTCTGGGTATGCGTCCGTGGATTGCTGTTGCATATTTAGCTCC 2688954
Query 8649 TGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGA 8708
|||||| |||||| | ||||| ||| | |||| || | |||||||| || | |||
Sbjct 2688953 TGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTTTGA 2688894
Query 8709 TGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCA 8768
|||||||||||| || ||||| ||| ||||||| ||| |||| ||||||||||||||
Sbjct 2688893 TGGTATGCCTCTAGGAATCTCTAATACTTTCAACTTCATGATTGTATTCCAGGCTGAGCA 2688834
Query 8769 CAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGT 8813
|||||| || |||||||| || |||||| | || || |||||||
Sbjct 2688833 CAACATTCTTATGCACCCATTTCACATGTTAGGCGTAACTGGTGT 2688789
>seq3494
Length=2094846
Score = 316 bits (350), Expect = 2e-81
Identities = 393/536 (73%), Gaps = 4/536 (1%)
Strand=Plus/Minus
Query 8579 TGGGTCGTGAATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCAT 8638
||| |||||| ||||||||| || ||| || || |||||| ||||| ||||||||
Sbjct 1053978 TGGATCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTATGTGGATTGCTGTTGCAT 1053919
Query 8639 ACTCTGCTCCTGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTT--TTGGTCAAGG 8696
| || |||| |||| ||| || ||||||| || | |||| ||| | ||||||||
Sbjct 1053918 ATTCAAGTCCTATTGCAGCTACTACTGCTGTTTTTTCTATCTA--CTTAATCGGTCAAGG 1053861
Query 8697 TTCGTTCTCTGATGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTT 8756
|| ||||||||||||||||| || ||||| ||||| ||||||| ||| |||| ||
Sbjct 1053860 AAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATT 1053801
Query 8757 CCAGGCTGAGCACAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTT 8816
| |||||||||||||||| || |||||||| || |||||| | || | |||||||| ||
Sbjct 1053800 CTAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGCATAGCTGGTGTATT 1053741
Query 8817 CGGCGGATCTCTCTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGA 8876
|| || || || || || || |||||||| | || |||||| || | | ||
Sbjct 1053740 CGATGGCTCGCTATTCAGTGCTATACATGGTTCTTTGGTAACTTCTAGTTTGATCAGGGA 1053681
Query 8877 GACCACCGAAACCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTA 8936
|||| |||| || ||| || | || || | ||||||||||| || ||||||||
Sbjct 1053680 AACCATAGAAAATGAATCTGCTAATGAAGGTTAAAGATTCGGTCAAGAGGAAGAAACTTA 1053621
Query 8937 CAACATTGTTGCCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAA 8996
|| || || || | |||||| || ||||| | ||||||||||||||||| ||| ||
Sbjct 1053620 TAATATCGTAGCTGTTCATGGTTATTTTGGCCAATTGATCTTCCAATATGCTAGTTTCAA 1053561
Query 8997 CAATTCTAGAAGCTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTAC 9056
||| ||| | || |||||||| | || || |||||||| || || |||||||| ||
Sbjct 1053560 CAACTCTCGTTCTTTATATTTCTTCTTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTAAC 1053501
Query 9057 CGCCCTCGGCGTCTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGT 9112
|| | || | || ||||| |||||||| ||||| ||||| ||||||||||
Sbjct 1053500 TGCTTTAGGGATTAACACTATGGCCTTCAACCTAAATGGTTTCAATTTCAACCAGT 1053445
>seq2871
Length=25858
Score = 298 bits (330), Expect = 6e-76
Identities = 465/666 (70%), Gaps = 9/666 (1%)
Strand=Plus/Minus
Query 8574 TTATATGGGTCGTGAATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGT 8633
||| ||||||||||| ||||||||| || ||| || || ||||| || ||||| |||
Sbjct 14610 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCATGGATTGCTGT 14551
Query 8634 TGCATACTCTGCTCCTGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCA 8693
|||||| || |||||| || | | || || || | |||| || | |||||
Sbjct 14550 TGCATATTCAGCTCCTATTACAGTTGTTT---------TCTTGATCTACCCAATCGGTCA 14500
Query 8694 AGGTTCGTTCTCTGATGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGT 8753
||| || ||||||||||||||||| || ||||| ||| ||||||| ||| ||||
Sbjct 14499 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTAGTATTTTCAACTTCATGATTGT 14440
Query 8754 CTTCCAGGCTGAGCACAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGT 8813
||||| |||| |||||||| || |||| || || |||||| | || || ||||||||
Sbjct 14439 ATTCCAAACTGAACACAACATTCTTGTGCATCCATTTCACATGTTAGGCGTAGCTGGTGT 14380
Query 8814 CTTCGGCGGATCTCTCTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCG 8873
||||| || || || || ||| ||||| ||||| || || |||||| || | |
Sbjct 14379 ATTCGGTGGCTCCCTATTCAGCGCTATGCACGGTTCCCTGGTAACTTCTAGTTTGATAAG 14320
Query 8874 TGAGACCACCGAAACCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAAC 8933
|| |||| |||| || ||| || | || |||| ||||||||||| || |||||
Sbjct 14319 GGAAACCATAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 14260
Query 8934 TTACAACATTGTTGCCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTT 8993
||| || || || | |||||||| || ||||| ||||| |||||||||| |||
Sbjct 14259 TTATAATATCGTAGGTGCTCATGGTTATTTTGGCTTATTGATATTCCAATATGTTAGTTT 14200
Query 8994 TAACAATTCTAGAAGCTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTT 9053
||||| ||| || ||||||||| | || || |||| ||| | | ||||||||
Sbjct 14199 CAACAACTCTCATTCTTTACATTTCTTCTTAGCAGCTTGGCTTGTAGAAAGTATCTGGTT 14140
Query 9054 TACCGCCCTCGGCGTCTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTC 9113
|| | | || | || |||||||||||||| |||| || || ||||||||||
Sbjct 14139 CACTACTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGATTTGAATTTCAACCAGTT 14080
Query 9114 CATTATCGACGGACAAGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGG 9173
| | || |||| || || | ||||| ||||| || | | || || |
Sbjct 14079 TGTAGTTGATAATTAAGGTCGTGTAATTAACACTTGGGCTGATATTATGAATCGTGATAA 14020
Query 9174 ACTCGGTATGGAAGTCATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGC 9233
|| | |||| |||| ||||| || | || || ||||||||||| || ||||| || ||
Sbjct 14019 CCTTGATATGAAAGTTATGCATGACTGTAATGCTCACAACTTCCCTCTAGACCTAGCAGC 13960
Query 9234 TGCTGA 9239
|| |||
Sbjct 13959 TGTTGA 13954
>seq3405
Length=1277461
Score = 185 bits (204), Expect = 9e-42
Identities = 391/588 (66%), Gaps = 43/588 (7%)
Strand=Plus/Plus
Query 10174 ATTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGT 10233
|||||||| |||| ||| ||||| || || || ||||| || |||| |||||||||
Sbjct 862992 ATTAATTG-----CGACTTTATAATGCAATTGCATTCTCTGGTCCAATTGTTGTTTTTGT 863046
Query 10234 CAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGG 10293
|| ||||| || || ||| | || || |||||||||||||||| | | ||||| ||
Sbjct 863047 TTACGTATTCCTGATTTACCCATTAGGTCAATCTAGTTGGTTCTTTGTGTCTAGTTTTGG 863106
Query 10294 CGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAA 10353
|| | || || || || ||| | ||||| |||| | ||||| |||||||| ||
Sbjct 863107 TGTAACAGCTATATTTCGATTCATCCTCTTTTTCCAAAGGTTTCACAATTGGACTCTG-- 863164
Query 10354 TCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCA 10413
| || | |||| | | ||| || | || ||||||||
Sbjct 863165 -CTCTGC--TATGCTATGCGTT------ATTCATGG--------TCCTATCA-------- 863199
Query 10414 CGGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGC 10473
|| |||| || | | | | |||||||| ||||| | || ||
Sbjct 863200 -----------TAAAAAATACTTTATTTGAGGATGGCGATGGTGCAAATAAATTATGTGC 863248
Query 10474 TTTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTC 10533
|||| | ||||||| |||| | ||||| ||| | |||||||| ||||| |||||
Sbjct 863249 TTTTAACCCAACTCAAGTCAAAGAAATTTATTCAATGATCACTGCTAAACGTTTTTGGTC 863308
Query 10534 CCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGT 10593
||| || ||||| |||||||| |||||||||||| | |||||||||||| | |||||
Sbjct 863309 CCAAATCTTTGGTGTTGCTTTTTCCAATAAACGCTGATTACATTTCTTTATGTTATTTGT 863368
Query 10594 ACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCG 10653
| || | || | || | | | || || || | | ||||| ||| | || || |
Sbjct 863369 GCTAGTAACTAGTTTATGAATGTGTGCTCTTTGAGTAGTCGGTCTGGCTTTGAACCTATG 863428
Query 10654 TGCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTT 10713
||| || || || | || || || | | | || || ||||||||||||||||||| ||
Sbjct 863429 TGCCTATGACTTCCTTTCCCAGGAAACCTGTGCAGCAAAAGATCCTGAATTTGAGACTTT 863488
Query 10714 CTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGC 10761
|| || || | ||| ||| | ||| | || ||| ||| ||||||||
Sbjct 863489 CTGCACCAAAACTATTCTTTTAAACCGAAGTATTCATGCTTGGATGGC 863536
>seq3314
Length=478066
Score = 149 bits (164), Expect = 6e-31
Identities = 211/297 (71%), Gaps = 0/297 (0%)
Strand=Plus/Plus
Query 10138 AATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGATTAATTGGAATCCGACCTTACAA 10197
||| || ||||||||| | || ||| | || || |||| ||| | | ||||||| ||
Sbjct 267405 AATAGGTTTTATGTTAGGTCAATTTAAACTTGCTCGATTTATTTAATTGTGACCTTATAA 267464
Query 10198 TGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCATCTATCCACT 10257
|| || || || ||||| || |||||| ||||||| | | ||| | || || ||| |
Sbjct 267465 TGTAATTGCATTCTCTGGTCCAATTGCTATTTTTGTTTCTATATTCTTGATTTACCCATT 267524
Query 10258 CGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATTTTCCGCTTCCT 10317
|| || | | |||||||||||||||| ||||| || || | | || | | ||| |
Sbjct 267525 AGGTCAATTTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAACAGTTATAATTTGATTCAT 267584
Query 10318 TCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGAGTTGC 10377
|| || | ||||| |||||||||| ||| | || | || |||||||||||||||||
Sbjct 267585 CCTATTTTTTCAGGGGTTTCATAATTAGACATTGAACTCATTTCATATGATGGGAGTTGC 267644
Query 10378 TGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTAGAAAACAC 10434
||| || |||| | || || |||| || || || || | || |||||||| ||
Sbjct 267645 CGGTGTATTGGGCGCTGCTCTGCTATACGCTATTCATGGTGCTACAGTAGAAAATAC 267701
>seq3463
Length=1425124
Score = 138 bits (152), Expect = 1e-27
Identities = 197/275 (72%), Gaps = 2/275 (1%)
Strand=Plus/Plus
Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGCTTCATTAC 8348
|| |||||||| ||| | |||||||| ||| || ||| |||| || | || ||||
Sbjct 46924 GGATGGTTTGGTGTTTTGATGATCCCTACC-TTATTGACCGCAACTTCTGTATTTATTAT 46982
Query 8349 CGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATC 8408
| ||||| || ||| |||||| | | || || || || || ||||| ||| ||| ||
Sbjct 46983 CACATTCATTACTGGTCCTCCATTAAATATTGATGGTATTCGTGAACCTGTTTCTGAATA 47042
Query 8409 TCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGG 8468
||| | || || ||||| || || |||||||| || |||| | ||| || || ||
Sbjct 47043 TCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGG 47102
Query 8469 CCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGG 8528
| ||||| ||||| ||||||||||| || || ||||||| ||| | ||||| || ||
Sbjct 47103 TTTGCACTTTTACCCGATCTGGGAAGCGGCATCCTTTGATGAATGGTTATACAATGGCGG 47162
Query 8529 TCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTG 8563
|||||| | || | ||| | |||||| | ||||
Sbjct 47163 TCCTTATGAACTAATTGTTCTACACTTCTTACTTG 47197
>seq3501
Length=2764102
Score = 118 bits (130), Expect = 1e-21
Identities = 213/312 (68%), Gaps = 7/312 (2%)
Strand=Plus/Minus
Query 8905 GGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTACTTT 8964
|| |||| ||| ||||||| || || ||||| || || || |||||||| || |||
Sbjct 1162814 GGTTACAGATTCAGTCAAGAGGAAGAGACTTATAATATCGTAATTGCTCATGGTTATTTT 1162755
Query 8965 GGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTCTTCCTC 9024
|| |||||||||||||||||||| |||| ||| | || |||||||| |
Sbjct 1162754 GGCCGCTTGATCTTCCAATATGC-------TACAACTCTCGTTCTTTATATTTCTTCTTA 1162702
Query 9025 GCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTCTCGACCATGGCTTTC 9084
| || |||||||| || | |||||||| || || | || | || || |||||
Sbjct 1162701 ACAGCTTGGCCTGTAGTTCGTATCTGGTTCACTGCTTTAGGTATTAGCACTATATCTTTC 1162642
Query 9085 AACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACAAGGACGAGTGCTCAAC 9144
||| | ||||| ||||| |||||| |||| | | || | |||| | || | ||
Sbjct 1162641 AACTTAAATGGTTTCAATTTCAACGAGTCTGTAGTTGATAGTTAAGGTTGTGTAATTAAT 1162582
Query 9145 ACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGTCATGCACGAAAGAAAC 9204
|| |||| || | |||||| || || || |||||| | ||||| ||| | ||
Sbjct 1162581 ACGTGGGTTGATATTATTAACCATGCTAACCTTGGAATGGAAATTATGCATGAACGTAAT 1162522
Query 9205 GCACACAACTTC 9216
|| |||||||||
Sbjct 1162521 GCTCACAACTTC 1162510
Score = 105 bits (116), Expect = 7e-18
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 8914 TTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTACTTTGGTCGCTTG 8973
||||||||||| || ||||||||||| || || || |||||||| || |||||| | |||
Sbjct 1485115 TTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGGTTGATTG 1485174
Query 8974 ATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTCTTCCTCGCTGCGTGG 9033
|| ||||||||||| ||| ||||| | | | || |||||||| | | | |||
Sbjct 1485175 ATATTCCAATATGCTAGTTTCAACAACTATCGTTTTTTATATTTCTTCTTAACGACTTGG 1485234
Query 9034 CCTGTGGTGGGAATCTGGTTTACCGC 9059
||| | || || ||||||||||| ||
Sbjct 1485235 CCTATAGTTGGTATCTGGTTTACTGC 1485260
>seq3421
Length=1377396
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 10286 AGTTTCGGCGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGG 10345
||||| || || || || || || || ||| | ||||| | ||||| |||||||||||
Sbjct 145962 AGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTACAGGGGTTTCATAATTGA 146021
Query 10346 ACGCTCAATCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCA 10405
|| | || || || ||||||||||||||| | ||| || | || || || ||||
Sbjct 146022 ACATTGAACCCATTTCATATGATGGGAGTTACCGGTGTATTAGGCACTGCTCTGCTATGC 146081
Query 10406 GCAATCCACGGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACT 10465
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Sbjct 146082 CTTATTCATGGTGCGATCGTAAAAAATACTTTATTTGAGGATGGTGATGGTGCAAATACA 146141
Query 10466 TTCAAAGCTTTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACT 10516
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Sbjct 146142 TTCCATGCTTTTAACCCAAATCAAGTCGAAGAAACTTATTCAATGGTCACT 146192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 516365315616000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |