Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06]
17,764 sequences; 369,781,828 total letters
Query= NC_019723.1
Length=47090
Score E
Sequences producing significant alignments: (Bits) Value
seq4995 2069 0.0
>seq4995
Length=1147
Score = 2069 bits (2294), Expect = 0.0
Identities = 1147/1147 (100%), Gaps = 0/1147 (0%)
Strand=Plus/Minus
Query 29524 GTAAAGAAACAGTAAGATAATACTCAACCCGATGTTTGAGTACGGTCATCATCTGACACT 29583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1147 GTAAAGAAACAGTAAGATAATACTCAACCCGATGTTTGAGTACGGTCATCATCTGACACT 1088
Query 29584 ACAGACTCTGGCATCGCTGTGAAGACGACGCGAAATTCAGCATTTTCACAAGCGTTATCT 29643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1087 ACAGACTCTGGCATCGCTGTGAAGACGACGCGAAATTCAGCATTTTCACAAGCGTTATCT 1028
Query 29644 TTTACAAAACCGATCTCACTCTCCTTTGATGCGAATGCCAGCGTCAGACATCATATGCAG 29703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1027 TTTACAAAACCGATCTCACTCTCCTTTGATGCGAATGCCAGCGTCAGACATCATATGCAG 968
Query 29704 ATACTCACCTGCATCCTGAACCCATTGACCTCCAACCCCGTAATAGCGATGCGTAATGAT 29763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 967 ATACTCACCTGCATCCTGAACCCATTGACCTCCAACCCCGTAATAGCGATGCGTAATGAT 908
Query 29764 GTCGATAGTTACTAACGGGTCTTGTTCGATTAACTGCCGCAGAAACTCTTCCAGGTCACC 29823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 GTCGATAGTTACTAACGGGTCTTGTTCGATTAACTGCCGCAGAAACTCTTCCAGGTCACC 848
Query 29824 AGTGCAGTGCTTGATAACAGGAGTCTTCCCAGGATGGCGAACAACAAGAAACTGGTTTCC 29883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 847 AGTGCAGTGCTTGATAACAGGAGTCTTCCCAGGATGGCGAACAACAAGAAACTGGTTTCC 788
Query 29884 GTCTTCACGGACTTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAAC 29943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 787 GTCTTCACGGACTTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAAC 728
Query 29944 ACCTTCGTAATACTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACG 30003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 727 ACCTTCGTAATACTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACG 668
Query 30004 CAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTG 30063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTG 608
Query 30064 CTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCACAATCGATGGTGTTACCAATTCATG 30123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 607 CTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCACAATCGATGGTGTTACCAATTCATG 548
Query 30124 GAAAAGGTCTGCGTCAAATCCCCAGTCGTCATGCATTGCCTGCTCTGCCGCTTCACGCAG 30183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 547 GAAAAGGTCTGCGTCAAATCCCCAGTCGTCATGCATTGCCTGCTCTGCCGCTTCACGCAG 488
Query 30184 TGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGATAAGTTCCAGATCC 30243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 487 TGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCTCTGTTTACTGATAAGTTCCAGATCC 428
Query 30244 TCCTGGCAACTTGCACAAGTCCGACAACCCTGAACGACCAGGCGTCTTCGTTCATCTATC 30303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 427 TCCTGGCAACTTGCACAAGTCCGACAACCCTGAACGACCAGGCGTCTTCGTTCATCTATC 368
Query 30304 GGATCGCCACACTCACAACAATGAGTGGCAGATATAGCCTGGTGGTTCAGGCGGCGCATT 30363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 367 GGATCGCCACACTCACAACAATGAGTGGCAGATATAGCCTGGTGGTTCAGGCGGCGCATT 308
Query 30364 TTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTCTGATGCTGAATCAATGATGTCTGCC 30423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 307 TTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTCTGATGCTGAATCAATGATGTCTGCC 248
Query 30424 ATCTTTCATTAATCCCTGAACTGTTGGTTAATACGCTTGAGGGTGAATGCGAATAATAAA 30483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 247 ATCTTTCATTAATCCCTGAACTGTTGGTTAATACGCTTGAGGGTGAATGCGAATAATAAA 188
Query 30484 AAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTTCATGTTCATCGTTCCTTAAAGACGC 30543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 187 AAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTTCATGTTCATCGTTCCTTAAAGACGC 128
Query 30544 CGTTTAACATGCCGATTGCCAGGCTTAAATGAGTCGGTGTGAATCCCATCAGCGTTACCG 30603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 127 CGTTTAACATGCCGATTGCCAGGCTTAAATGAGTCGGTGTGAATCCCATCAGCGTTACCG 68
Query 30604 TTTCGCGGTGCTTCTTCAGTACGCTACGGCAAATGTCATCGACGTTTTTATCCGGAAACT 30663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 67 TTTCGCGGTGCTTCTTCAGTACGCTACGGCAAATGTCATCGACGTTTTTATCCGGAAACT 8
Query 30664 GCTGTCT 30670
|||||||
Sbjct 7 GCTGTCT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 150534638394336
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