Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq10784 553 4e-153 seq2871 289 8e-74 seq3513 242 1e-59 seq3494 241 4e-59 seq3463 158 3e-34 seq3501 145 2e-30 seq3473 102 2e-17 seq3301 93.3 1e-14 >seq10784 Length=1928 Score = 553 bits (612), Expect = 4e-153 Identities = 719/986 (73%), Gaps = 6/986 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || ||||||||| | || ||| | ||||||||||| |||| |||||| Sbjct 1837 TGGGGTCGCTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTT 1778 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397 ||||| ||||||| |||| || | | | || || | ||| |||||| |||| |||| Sbjct 1777 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCATTCA 1720 Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 ||||||| ||||| ||||| |||||||| |||||||||||||| ||||| ||||| || | Sbjct 1719 TTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTT 1660 Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517 |||| ||||| || || ||||||||| | | |||| | || || || | || | Sbjct 1659 ATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACT 1600 Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577 | || ||||||||||||| || |||| |||||| | ||||||||||| |||||| Sbjct 1599 TTTACCCGATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATG 1540 Query 42578 AGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAAC 42637 | || | || | |||||| | | ||| | | |||| |||| || || ||||||| Sbjct 1539 AACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAAC 1480 Query 42638 TTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTG 42697 || | ||| || || ||| | || ||||| |||||| || || || ||||| || | Sbjct 1479 TTAGTTTCCGTCTGGGTATGCGTCCGTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAG 1420 Query 42698 CAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGC 42757 | || || || || ||| | |||| ||| | || ||||| |||||| ||||| |||| Sbjct 1419 CTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGC 1360 Query 42758 CTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTC 42817 |||| || || || ||||| |||||||||||| | || ||||||||||| || ||||||| Sbjct 1359 CTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATTC 1300 Query 42818 TTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAG 42877 ||||||| || || || ||| | || || || || ||||| || || || | ||| | Sbjct 1299 TTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTG 1240 Query 42878 CTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCC 42937 ||||||||||| | || || ||| | | | | ||||| || ||||| ||| Sbjct 1239 CTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTG 1180 Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997 ||| | || |||| |||||||||||||| || |||||||| || || || || |||| Sbjct 1179 CTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATG 1120 Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCAC 43056 |||| ||||| || | |||||||||||||| | |||| || || ||| ||||| || Sbjct 1119 GTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAACAACTCTCGTTCTTTACAT 1061 Query 43057 TTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACT 43116 ||||| | || |||||||| || || || || ||||||||| || | || | || ||| Sbjct 1060 TTCTTCTTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACT 1001 Query 43117 ATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCAT 43176 ||||| || ||| | |||||||| || || ||||| || | ||||||| ||| || | Sbjct 1000 ATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAGTCTGTAGTTGATAGTCAAGGTCGT 941 Query 43177 GTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCAC 43236 || || ||||||||||||||| | || ||||| |||||||| | || || || Sbjct 940 GTAATTAACACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTTGACAT 881 Query 43237 GAGCGGAATGCACATAACTTCCCGCT 43262 || || ||||| || |||||||| || Sbjct 880 GAACGTAATGCTCACAACTTCCCTCT 855 >seq2871 Length=25858 Score = 289 bits (320), Expect = 8e-74 Identities = 465/667 (70%), Gaps = 11/667 (2%) Strand=Plus/Minus Query 42615 TTACTTGGGACGCGAATGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGT 42674 |||| |||| || || ||||||||| | ||| || || ||| | || ||||| ||| Sbjct 14610 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCATGGATTGCTGT 14551 Query 42675 TGCTTACTCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCA 42734 ||| || || || ||| | || | || ||| | |||| ||| | || || Sbjct 14550 TGCATATTCAGCTCCTATT---------ACAGTTGTTTTCTTGATCTACCCAATCGGTCA 14500 Query 42735 AGGTTCTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGT 42794 ||| |||||| ||||| |||||||| || || || ||| |||||||||||| | || Sbjct 14499 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTAGTATTTTCAACTTCATGATTGT 14440 Query 42795 CTTCCAGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGT 42854 ||||| ||||||| ||||||||| ||||||| || || ||| | || || || || || Sbjct 14439 ATTCCAAACTGAACACAACATTCTTGTGCATCCATTTCACATGTTAGGCGTAGCTGGTGT 14380 Query 42855 ATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCG 42914 ||| ||||| || | ||| |||||||| ||| || || || ||| | | | | Sbjct 14379 ATTCGGTGGCTCCCTATTCAGCGCTATGCACGGTTCCCTGGTAACTTCTAGTTTGATAAG 14320 Query 42915 TGAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGAC 42974 ||||| | ||||| ||| ||| | || |||| |||||||||||||| || || Sbjct 14319 GGAAACCATAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 14260 Query 42975 TTATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTT 43034 |||||| || || | || |||||||| ||||| | || |||||||||| | ||| Sbjct 14259 TTATAATATCGTAGGTGCTCATGGTTATTTTGGCTTATTGATATTCCAATATGT-TAGTT 14201 Query 43035 T-AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGT 43093 | || || || ||||| || ||||| | || ||||||| || | | || |||| Sbjct 14200 TCAACAACTCTCATTCTTTACATTTCTTCTTAGCAGCTTGGCTTGTAGAAAGTATCTGGT 14141 Query 43094 TCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAAT 43153 ||||| || | || | || |||||||| || ||| | |||| ||| || || ||||| | Sbjct 14140 TCACTACTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGATTTGAATTTCAACCAGT 14081 Query 43154 CACTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCA 43213 | ||||||||| | || ||| || ||||||||||||||| ||||||||| | Sbjct 14080 TTGTAGTTGATAATTAAGGTCGTGTAATTAACACTTGGGCTGATATTATGAATCGTGATA 14021 Query 43214 ACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTTGCAT 43273 |||||| | | || ||||| || | ||||| || |||||||| || || || ||| Sbjct 14020 ACCTTGATATGAAAGTTATGCATGACTGTAATGCTCACAACTTCCCTCTAGACCTAGCAG 13961 Query 43274 CCGTGGA 43280 | || || Sbjct 13960 CTGTTGA 13954 >seq3513 Length=3706331 Score = 242 bits (268), Expect = 1e-59 Identities = 369/519 (71%), Gaps = 5/519 (1%) Strand=Plus/Minus Query 42329 TTGGGTGGTTTGGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTAT 42386 |||| ||||||||||| ||||||| |||| || | | | || || ||| ||||| Sbjct 2689313 TTGGATGGTTTGGTGTT-TGATGAT-CCCTACCTTATTGACCGCAACTTT-TGTATTTAT 2689257 Query 42387 TGTCGCTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGG 42446 | | || ||||||||||| ||||| ||||| ||||||||||||||| |||| | ||||| Sbjct 2689256 TATTGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGCATTCGTAAACCGATTTCTGG 2689197 Query 42447 CTCTCTTCTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAAT 42506 ||||| || ||||| || || || || ||| ||||| | | |||| | || || Sbjct 2689196 ATCTCTACTTTATGGAAATAATATTATTTCTAGTGCCATTATTCCTACTTCTGCAGCTAT 2689137 Query 42507 TGGACTACATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGG 42566 | | || || || |||| |||||||| || |||| |||||| | |||||||| Sbjct 2689136 AAGTTTGCACTTTTACCCGATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGG 2689077 Query 42567 CGGACCTTATCAGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACG 42626 || |||||| | || | || | |||||| | | ||| | | |||| ||| || Sbjct 2689076 CGATCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGATCG 2689017 Query 42627 CGAATGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGC 42686 || || |||||| | ||| || || ||| | || ||||| |||||| || | || Sbjct 2689016 TGAGTGAGAACTTAGTTTCCGTCTGGGTATGCGTCCGTGGATTGCTGTTGCATATTTAGC 2688957 Query 42687 CCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTC 42746 ||||| || || || || || || ||| | |||| ||| | || ||||| ||||| Sbjct 2688956 TCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTT 2688897 Query 42747 AGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGA 42806 ||||| |||||||| || || || ||| |||||||||||| | || ||||||||||| Sbjct 2688896 TGATGGTATGCCTCTAGGAATCTCTAATACTTTCAACTTCATGATTGTATTCCAGGCTGA 2688837 Query 42807 ACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGT 42845 || |||||||||||||| || || || ||| | || || Sbjct 2688836 GCACAACATTCTTATGCACCCATTTCACATGTTAGGCGT 2688798 >seq3494 Length=2094846 Score = 241 bits (266), Expect = 4e-59 Identities = 376/535 (70%), Gaps = 2/535 (0%) Strand=Plus/Minus Query 42618 CTTGGGACGCGAATGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGC 42677 ||||| || || ||||||||| | ||| || || ||| | ||||| |||||| Sbjct 1053980 CTTGGATCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTATGTGGATTGCTGTTGC 1053921 Query 42678 TTACTCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGG 42737 || || ||| | || || | ||||| || || | |||| | | || ||||| Sbjct 1053920 ATATTCAAGTCCTATTGCAGCTACTACTGCTGTTTTTTCTATCTACTTAATCGGTCAAGG 1053861 Query 42738 TTCTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTT 42797 |||||| ||||| |||||||| || || || ||||| |||||||||||| | || || Sbjct 1053860 AAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATT 1053801 Query 42798 CCAGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATT 42857 | ||||||| || |||||||||||||| || || || ||| | || | || || ||||| Sbjct 1053800 CTAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGCATAGCTGGTGTATT 1053741 Query 42858 TGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGA 42917 | ||| ||| | ||| ||||| |||||| | | || || ||| | | | | || Sbjct 1053740 CGATGGCTCGCTATTCAGTGCTATACATGGTTCTTTGGTAACTTCTAGTTTGATCAGGGA 1053681 Query 42918 AACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTA 42977 ||| | ||||| ||| ||| | || || | |||||||||||||| || ||||| Sbjct 1053680 AACCATAGAAAATGAATCTGCTAATGAAGGTTAAAGATTCGGTCAAGAGGAAGAAACTTA 1053621 Query 42978 TAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-A 43036 ||| || || || | |||||||| ||||| | | |||||||||||||| | |||| | Sbjct 1053620 TAATATCGTAGCTGTTCATGGTTATTTTGGCCAATTGATCTTCCAATATGC-TAGTTTCA 1053562 Query 43037 ATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCA 43096 | || ||| ||||| | ||||| | || |||||||| || || || || ||||| | Sbjct 1053561 ACAACTCTCGTTCTTTATATTTCTTCTTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTAA 1053502 Query 43097 CTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCA 43151 || || | || | | |||||||| || ||| | |||||||| || || ||||| Sbjct 1053501 CTGCTTTAGGGATTAACACTATGGCCTTCAACCTAAATGGTTTCAATTTCAACCA 1053447 >seq3463 Length=1425124 Score = 158 bits (174), Expect = 3e-34 Identities = 230/320 (72%), Gaps = 4/320 (1%) Strand=Plus/Plus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || |||||||| | || ||| | ||||||||||| |||| |||||| Sbjct 46873 TGGGGTCGCTTCTGTAACTGAATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTT 46932 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397 ||||| ||||||| |||| || | | | || || | ||| |||||| || | |||| Sbjct 46933 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCACATTCA 46990 Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 || ||| ||||| || | |||||||| |||||||||||||| |||| | ||| || | Sbjct 46991 TTACTGGTCCTCCATTAAATATTGATGGTATTCGTGAACCTGTTTCTGAATATCTACTTT 47050 Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517 |||| ||||| || || ||||||||| | | |||| | || || || | || | Sbjct 47051 ATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACT 47110 Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577 | || ||||||||||||| || |||| |||||| | ||||||||||| |||||| Sbjct 47111 TTTACCCGATCTGGGAAGCGGCATCCTTTGATGAATGGTTATACAATGGCGGTCCTTATG 47170 Query 42578 AGCTCGTCGTGTTCCACTTC 42597 | || | || | |||||| Sbjct 47171 AACTAATTGTTCTACACTTC 47190 >seq3501 Length=2764102 Score = 145 bits (160), Expect = 2e-30 Identities = 219/312 (70%), Gaps = 7/312 (2%) Strand=Plus/Minus Query 42946 GGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTT 43005 || |||| ||| |||||||||| ||||||||||| || || || |||||||| ||| Sbjct 1162814 GGTTACAGATTCAGTCAAGAGGAAGAGACTTATAATATCGTAATTGCTCATGGTTATTTT 1162755 Query 43006 GGACGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCACTTCTTTCTT 43065 || || | |||||||||||||| | || ||| ||||| | ||||| | Sbjct 1162754 GGCCGCTTGATCTTCCAATATGC-------TACAACTCTCGTTCTTTATATTTCTTCTTA 1162702 Query 43066 GCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTT 43125 | |||||||| || || | || ||||||||| || | || | || ||||| | || Sbjct 1162701 ACAGCTTGGCCTGTAGTTCGTATCTGGTTCACTGCTTTAGGTATTAGCACTATATCTTTC 1162642 Query 43126 AACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCT 43185 ||||| |||||||| || || ||| | || | ||||||| | | | ||| || | Sbjct 1162641 AACTTAAATGGTTTCAATTTCAACGAGTCTGTAGTTGATAGTTAAGGTTGTGTAATTAAT 1162582 Query 43186 ACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAAT 43245 || |||| ||||||| | || | ||| |||||||| | || | ||||| || || ||| Sbjct 1162581 ACGTGGGTTGATATTATTAACCATGCTAACCTTGGAATGGAAATTATGCATGAACGTAAT 1162522 Query 43246 GCACATAACTTC 43257 || || |||||| Sbjct 1162521 GCTCACAACTTC 1162510 Score = 91.5 bits (100), Expect = 4e-14 Identities = 140/193 (73%), Gaps = 5/193 (3%) Strand=Plus/Plus Query 42955 TTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTT 43014 |||||||||||||| || ||||| || || || || || |||||||| ||||| | | Sbjct 1485115 TTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGGTTGATTG 1485174 Query 43015 ATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCG-CTT 43072 || ||||||||||| | |||| || || ||| | ||| | ||| ||||| || ||| Sbjct 1485175 ATATTCCAATATGC-TAGTTTCAACAACTATCGTTTTTTATATTTC-TTCTTAACGACTT 1485232 Query 43073 GGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGA 43132 |||| | || || || ||||| ||| || | | | || |||||| | || |||| | Sbjct 1485233 GGCCTATAGTTGGTATCTGGTTTACTGCTTTAGTTATTAGCACTATGAC-TTCAACTAAA 1485291 Query 43133 ATGGTTTTAACTT 43145 ||||||| || || Sbjct 1485292 ATGGTTTCAATTT 1485304 >seq3473 Length=2007359 Score = 102 bits (112), Expect = 2e-17 Identities = 116/152 (76%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 42310 ACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTGATGATTCCCTGTCTGCTCGCT 42369 ||| | ||||||||||| |||| ||||||||||| ||||||| || | | | | Sbjct 1590890 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTT-TGATGATCCCTACTTTATTGACC 1590948 Query 42370 GCTACCACCTGT-TTTATTGTCGCTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCAT 42428 || || | ||| |||| | |||| |||||||||| ||||| ||||| |||||||| || Sbjct 1590949 GCAACTTC-TGTATTTACTATCGCATTCATTGCTGTTCCTCCAGTAGATATTGATGGTAT 1591007 Query 42429 TCGTGAACCTGTCTCTGGCTCTCTTCTGTATG 42460 |||||||||| | |||| ||||| || |||| Sbjct 1591008 TCGTGAACCTATTTCTGAATCTCTACTTTATG 1591039 >seq3301 Length=291840 Score = 93.3 bits (102), Expect = 1e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| ||| |||||||| ||| | || ||| | || | | |||| || | |||||| Sbjct 13826 TGGGGTCACTTTTGTAATTGGATAACCAGCACTGAAAATCATATTTACATTTGATGGTTT 13767 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398 ||||| ||||||| | | | | |||| | | |||| |||||| || | ||||| Sbjct 13766 GGTGTTTTGATGATCTCTACTTTATTGACTGC-AACTTCTGTATTTATTATCACATTCAT 13708 Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458 | || |||| ||||| ||||||| |||| ||||||||| | ||| ||||| || || Sbjct 13707 CGTTGTTCCTCTAGTAGATATTGATGATATTCCTGAACCTGTTTTTGGATCTCTACTTTA 13648 Query 42459 TGGCAACAACATCAT 42473 ||| ||||| || || Sbjct 13647 TGGAAACAATATTAT 13633 Score = 82.4 bits (90), Expect = 2e-11 Identities = 202/304 (66%), Gaps = 3/304 (1%) Strand=Plus/Minus Query 42545 TTGACGAATGGCTCTACAATGGCGGACCTTATCAGCTCGTCGTGTTCCACTTCCTTATCG 42604 |||| |||||| | |||||||| || |||| | | || | || || ||||| ||| | Sbjct 13606 TTGATGAATGGTTATACAATGGTGGTCCTTGTGAACTAATTGTTTTACACTTACTTGGTG 13547 Query 42605 GTATCTTCTCTTACTTGGGACGCGAATGGGAACTTTCGTACCGACTTGGGATGAGGCCCT 42664 || ||| | ||| |||| || | | ||||| | || || || ||| | | | Sbjct 13546 -TAGCTTGT--TACATGGGCCGTAAGTAAAAACTTAGTTTCCATCTAGGTATGCGTCTGT 13490 Query 42665 GGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATC 42724 |||| |||||| || || || || | || || | |||| | ||| | |||| Sbjct 13489 GGATTACTGTTGCATATTCAGCTTCTATTGCAGCTGTTACTGGTATTTTCTTGATCTACT 13430 Query 42725 CATTTGGGCAAGGTTCTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACT 42784 || | | ||| | ||||| ||||| ||| |||| || || || ||||| ||||| | Sbjct 13429 CAATCAGTCAAAGAAGTTTTTATGATGGTATGTCTCTAGGGATCTCTGGTACTTTCAATT 13370 Query 42785 TCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTG 42844 ||||| | || || || |||| ||||||||||| || || || || ||| | || | Sbjct 13369 TCATGATTGTATTTCAAACTGAGTGCAACATTCTTATCCACCCATTTCACATGTTAGGCG 13310 Query 42845 TTGC 42848 | || Sbjct 13309 TAGC 13306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143502522114672