Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq10784 551 2e-152 seq2871 340 5e-89 seq3494 273 6e-69 seq3513 239 1e-58 seq3501 163 8e-36 seq3512 150 5e-32 seq3301 111 5e-20 seq3463 100 8e-17 seq2858 93.3 1e-14 >seq10784 Length=1928 Score = 551 bits (610), Expect = 2e-152 Identities = 697/951 (73%), Gaps = 8/951 (1%) Strand=Plus/Minus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||||||||| |||| |||||||| ||||||| || | || ||| || | Sbjct 1801 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 1743 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| ||||||||||| || || ||||| || |||||||| || || || Sbjct 1742 TTCTGTATTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 1683 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 |||||| ||||| ||| || ||||||||||| || || || || ||| | | || | Sbjct 1682 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1623 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | ||| || || || | ||||| ||||| || |||||||| || |||||||| Sbjct 1622 TTCTGCA--GCTATAGGTTTGCACTTTTACCCGATCTGGGAAGCGGCATCCGTTGATGAA 1565 Query 28897 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTAT 28956 ||| | ||||| || || || | |||| | || | |||||| | |||| || | Sbjct 1564 TGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 1505 Query 28957 GCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGT 29016 ||||||||| || |||||||||||||| | || || || ||| | ||||||||| | Sbjct 1504 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCGTGGATTGCT 1445 Query 29017 GTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGT 29076 || ||||| |||||||| || ||||| || | || |||||| | |||||||| ||||| Sbjct 1444 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGT 1385 Query 29077 CAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTG 29136 ||||| |||| || | |||||| | || || || || || ||||||| |||| | Sbjct 1384 CAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATT 1325 Query 29137 GTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGA 29196 || ||||| || || || |||||||| |||||||| || |||||| | ||||| ||||| Sbjct 1324 GTATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGT 1265 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTG-T 29255 || ||||| ||||| ||||| ||||| ||||| ||||| |||| | | || | ||| | Sbjct 1264 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGAT 1206 Query 29256 GCGTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGA 29315 | || || || ||| | ||| || | ||||||| || || ||||| ||||| Sbjct 1205 CAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGA 1146 Query 29316 GACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTC 29375 |||||||| |||||||| ||||| ||||| ||||| || |||||||||||||||||| Sbjct 1145 AACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAG 1086 Query 29376 TTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTG 29435 |||||| || |||||| |||| |||||| | || || ||||| || ||||| || || Sbjct 1085 TTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCTGTAGTAGGTATCTG 1026 Query 29436 GTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCA 29495 |||| |||| || || || || ||||| || || || || ||||| || || ||||| Sbjct 1025 GTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCA 966 Query 29496 GTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGC 29555 ||| | | || | | |||||||| ||||| |||||||||||| || | || || || Sbjct 965 GTCTGTAGTTGATAGTCAAGGTCGTGTAATTAACACTTGGGCTGATATTATTAACCGTGC 906 Query 29556 TAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACT 29606 |||||| || | ||||| ||||| ||||||||||| |||||||| || Sbjct 905 TAACCTTGGTATGGAAGTTTGACATGAACGTAATGCTCACAACTTCCCTCT 855 >seq2871 Length=25858 Score = 340 bits (376), Expect = 5e-89 Identities = 471/658 (72%), Gaps = 11/658 (2%) Strand=Plus/Minus Query 28959 TTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGT 29018 ||||||||| || |||||||||||||| | || || || ||| | || |||||| ||| Sbjct 14610 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCATGGATTGCTGT 14551 Query 29019 CGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCA 29078 ||||| |||||||| | ||| | ||||| | |||||||| ||||||| Sbjct 14550 TGCATATTCAGCTCCTATTACAGTTG---------TTTTCTTGATCTACCCAATCGGTCA 14500 Query 29079 AGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGT 29138 ||| |||| || | |||||| | || || || | | ||||||| |||| | || Sbjct 14499 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTAGTATTTTCAACTTCATGATTGT 14440 Query 29139 GTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGT 29198 |||||| | ||||| |||||||| |||| || || |||||| | ||||| ||||| || Sbjct 14439 ATTCCAAACTGAACACAACATTCTTGTGCATCCATTTCACATGTTAGGCGTAGCTGGTGT 14380 Query 29199 GTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTG-TGC 29257 ||||||||||| ||||| || || ||||||||||| || || || || | | ||| | Sbjct 14379 ATTCGGTGGCTCCCTATTCAGCGCTATGCACGGTTCCCTGGTAACTTC-TAGTTTGATAA 14321 Query 29258 GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGA 29317 | || || | ||| | ||| || | ||||||| || || ||||| ||||| | Sbjct 14320 GGGAAACCATAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAA 14261 Query 29318 CTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTT 29377 ||||||| ||||||| ||||| ||||| ||||| ||||| |||||||||| | || Sbjct 14260 CTTATAATATCGTAGGTGCTCATGGTTATTTTGGCTTATTGATATTCCAATATGTTAGTT 14201 Query 29378 TCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGT 29437 |||| || | |||| |||| |||||| | || || |||| || | | | || |||| Sbjct 14200 TCAACAACTCTCATTCTTTACATTTCTTCTTAGCAGCTTGGCTTGTAGAAAGTATCTGGT 14141 Query 29438 TCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGT 29497 || || | || || || || ||||| || || || || | ||| || || ||||||| Sbjct 14140 TCACTACTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGATTTGAATTTCAACCAGT 14081 Query 29498 CGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTA 29557 | | || || | |||||||| ||||| |||||||||||| || | ||||| | || Sbjct 14080 TTGTAGTTGATAATTAAGGTCGTGTAATTAACACTTGGGCTGATATTATGAATCGTGATA 14021 Query 29558 ACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGC 29615 |||| | | |||| |||||||| |||||||||| |||||||| || || || || Sbjct 14020 ACCTTGATATGAAAGTTATGCATGACTGTAATGCTCACAACTTCCCTCTAGACCTAGC 13963 >seq3494 Length=2094846 Score = 273 bits (302), Expect = 6e-69 Identities = 380/530 (72%), Gaps = 2/530 (0%) Strand=Plus/Minus Query 28969 CGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCATACTCA 29028 || |||||||||||||| | || || || ||| | ||||||| ||| ||||| ||| Sbjct 1053973 CGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTATGTGGATTGCTGTTGCATATTCA 1053914 Query 29029 GCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTT 29088 ||| | ||||| | |||| ||||| ||||| | |||||||||| |||| Sbjct 1053913 AGTCCTATTGCAGCTACTACTGCTGTTTTTTCTATCTACTTAATCGGTCAAGGAAGTTTT 1053854 Query 29089 AGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCC 29148 || | |||||| | || || || || || ||||||| |||| | || ||| | || Sbjct 1053853 TCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCTAGGCT 1053794 Query 29149 GAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGC 29208 || || |||||||| |||||||| || |||||| | ||| | ||||| || |||| |||| Sbjct 1053793 GAGCACAACATTCTTATGCACCCATTTCACATGTTAGGCATAGCTGGTGTATTCGATGGC 1053734 Query 29209 TCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTG-TGCGTGAGACGAC 29267 |||||||| ||||| || || ||||| | || || | || | ||| | | || || | Sbjct 1053733 TCGCTATTCAGTGCTATACATGGTTCTTTGGTAAC-TTCTAGTTTGATCAGGGAAACCAT 1053675 Query 29268 TGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACAT 29327 ||| | ||| || | ||||| | || || ||||| ||||| |||||||| || Sbjct 1053674 AGAAAATGAATCTGCTAATGAAGGTTAAAGATTCGGTCAAGAGGAAGAAACTTATAATAT 1053615 Query 29328 CGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAG 29387 |||||| | ||| ||||| ||||| | |||||||||||||||||| |||||| || Sbjct 1053614 CGTAGCTGTTCATGGTTATTTTGGCCAATTGATCTTCCAATATGCTAGTTTCAACAACTC 1053555 Query 29388 CCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTT 29447 |||||| || | |||||| | || || ||||| || ||||| || ||||| |||| || Sbjct 1053554 TCGTTCTTTATATTTCTTCTTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTAACTGCTTT 1053495 Query 29448 GGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGT 29497 || || || ||||| || || || || ||||| || || ||||||| Sbjct 1053494 AGGGATTAACACTATGGCCTTCAACCTAAATGGTTTCAATTTCAACCAGT 1053445 >seq3513 Length=3706331 Score = 239 bits (264), Expect = 1e-58 Identities = 339/475 (71%), Gaps = 4/475 (1%) Strand=Plus/Minus Query 28726 TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGAACCTGTC 28785 || ||||||||||||||||| || || ||||| || ||||||||||| || |||| | Sbjct 2689261 TTTATTATTGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGCATTCGTAAACCGATT 2689202 Query 28786 GCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG--CAGCA 28843 ||||| ||| || |||||||| || || || || | ||| | | || | | ||| Sbjct 2689201 TCTGGATCTCTACTTTATGGAAATAATATTATTTCTAGTGCCATTATTCCTACTTCTGCA 2689142 Query 28844 ATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCT 28903 || || | | ||||| ||||| ||||||||||| || ||||||||||| | | Sbjct 2689141 --GCTATAAGTTTGCACTTTTACCCGATTTGGGAAGCGGCATCCGTTGATGAATGGTTAT 2689084 Query 28904 ACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACA 28963 |||| || | || | |||| | || | |||||| | |||| || | ||||| Sbjct 2689083 ACAATGGCGATCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACA 2689024 Query 28964 TGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCAT 29023 ||| || ||||| |||||||| | || || || ||| | ||||||||| ||| |||| Sbjct 2689023 TGGATCGTGAGTGAGAACTTAGTTTCCGTCTGGGTATGCGTCCGTGGATTGCTGTTGCAT 2688964 Query 29024 ACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTT 29083 | | |||||| || ||||| || | || |||||| | |||||||| |||||||||| Sbjct 2688963 ATTTAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAA 2688904 Query 29084 CTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCC 29143 |||| || | |||||| | || || || || ||||||| |||| | || |||| Sbjct 2688903 GTTTTTTTGATGGTATGCCTCTAGGAATCTCTAATACTTTCAACTTCATGATTGTATTCC 2688844 Query 29144 AAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGT 29198 | || || || |||||||| |||||||| || |||||| | ||||| |||| || Sbjct 2688843 AGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGCGTAACTGGTGT 2688789 >seq3501 Length=2764102 Score = 163 bits (180), Expect = 8e-36 Identities = 223/312 (71%), Gaps = 7/312 (2%) Strand=Plus/Minus Query 29290 GGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTT 29349 ||||||| || | ||||| |||||||||||||| |||||| ||||| ||||| ||| Sbjct 1162814 GGTTACAGATTCAGTCAAGAGGAAGAGACTTATAATATCGTAATTGCTCATGGTTATTTT 1162755 Query 29350 GGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTT 29409 || || |||||||||||||||||| | || |||||| || | |||||| | Sbjct 1162754 GGCCGCTTGATCTTCCAATATGCTAC-------AACTCTCGTTCTTTATATTTCTTCTTA 1162702 Query 29410 GCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTT 29469 | || ||||| || || | || |||||| |||| || || || || || | || Sbjct 1162701 ACAGCTTGGCCTGTAGTTCGTATCTGGTTCACTGCTTTAGGTATTAGCACTATATCTTTC 1162642 Query 29470 AATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAAT 29529 || | || ||||| || || ||| |||| | | || | | ||| |||| |||||| Sbjct 1162641 AACTTAAATGGTTTCAATTTCAACGAGTCTGTAGTTGATAGTTAAGGTTGTGTAATTAAT 1162582 Query 29530 ACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAAT 29589 || |||| |||| || | || | |||||||| || | ||| | |||||||| |||||| Sbjct 1162581 ACGTGGGTTGATATTATTAACCATGCTAACCTTGGAATGGAAATTATGCATGAACGTAAT 1162522 Query 29590 GCTCATAACTTC 29601 ||||| |||||| Sbjct 1162521 GCTCACAACTTC 1162510 Score = 93.3 bits (102), Expect = 1e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 29299 TTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTG 29358 || || ||||| ||||| ||||| || |||||||| ||||| ||||| ||||| | ||| Sbjct 1485115 TTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGGTTGATTG 1485174 Query 29359 ATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGG 29418 || |||||||||||| |||||| || |||| | || | |||||| | | | ||| Sbjct 1485175 ATATTCCAATATGCTAGTTTCAACAACTATCGTTTTTTATATTTCTTCTTAACGACTTGG 1485234 Query 29419 CCGGTGGTAGGGATTTGGTTCGCTGCCTT 29447 || | || || || ||||| |||| || Sbjct 1485235 CCTATAGTTGGTATCTGGTTTACTGCTTT 1485263 >seq3512 Length=3897756 Score = 150 bits (166), Expect = 5e-32 Identities = 339/505 (67%), Gaps = 7/505 (1%) Strand=Plus/Minus Query 29098 ATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAAC 29157 || ||||| || || || || || ||||||| ||| | ||||| | || | ||| Sbjct 70251 ATACCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTGTGTTTTAGATTGAGGACAAC 70192 Query 29158 ATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTT 29217 ||| | |||||| | || |||||| | || | | ||| || || ||||| |||||| Sbjct 70191 ATTTTTATGCACACATTTCACATGTTAAGCATAGATGGTGTATTTTATGGCTTTCTATTT 70132 Query 29218 AGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTGCGTGAGA-CGACTGAAGACAT 29276 ||||| ||| | ||||| | || || || | ||| | || | | || ||| | Sbjct 70131 AGTGCTATGAATGGTTCCTTAGTAACTTC-TATTTTGATCAAGAAAACCACAGAAAATGA 70073 Query 29277 CTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGC 29336 | | || | ||||| || |||| ||||| ||| | |||||||| |||| || Sbjct 70072 ATATGCTAATGAAGGTTAAAAATTTGATCAAGAGGAAAAAACTTATAAT----TAGCTGC 70017 Query 29337 TCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCT 29396 ||| ||||| |||| | ||||||||| |||||||| |||||| || |||||| | Sbjct 70016 TCATGGTTATGTTGGCCAATTGATCTTCTAATATGCTAGTTTCAACAACTCTCGTTCTTT 69957 Query 29397 ACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTC 29456 ||| |||||| | | || ||||| | |||| ||||| | |||| || | || Sbjct 69956 ACATTTCTTCTTAACAGCTTGGCCTATAATAGGTATTTGTGTTACTGCTTTAGATATTAG 69897 Query 29457 TACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGG 29516 | ||||| || | | || | ||||| || ||||| || | | || | | || Sbjct 69896 CATTATGGC-TTACAGCATAAATGCTTTAATTTCAACCAATCTGTCGTTGATAGTCAAGG 69838 Query 29517 TCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAAT 29576 | || | ||||||||||| |||||| || | || || |||||||| | | || | || Sbjct 69837 TTGTATAATTAATACTTGAGCTGATATTATTAACCGTGCTAACCTTAGTATGAAAATTAT 69778 Query 29577 GCATGAGCGTAATGCTCATAACTTC 29601 |||||| || ||||||| |||||| Sbjct 69777 GCATGAATGTCATGCTCACAACTTC 69753 >seq3301 Length=291840 Score = 111 bits (122), Expect = 5e-20 Identities = 208/305 (68%), Gaps = 3/305 (1%) Strand=Plus/Minus Query 28889 TTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTG 28948 ||||||||||| | ||||| || || || | |||| | || || ||||| | ||| Sbjct 13606 TTGATGAATGGTTATACAATGGTGGTCCTTGTGAACTAATTGTTTTACACTTAC---TTG 13550 Query 28949 GCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGT 29008 | || | ||||||||| || ||| ||||||| | | ||||| ||| | | || Sbjct 13549 GTGTAGCTTGTTACATGGGCCGTAAGTAAAAACTTAGTTTCCATCTAGGTATGCGTCTGT 13490 Query 29009 GGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACC 29068 ||||| ||| ||||| |||||| | | ||||| | ||| ||||| | ||||| Sbjct 13489 GGATTACTGTTGCATATTCAGCTTCTATTGCAGCTGTTACTGGTATTTTCTTGATCTACT 13430 Query 29069 CATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACT 29128 || || ||||| | |||| || | ||| || | || || || || || ||||| | Sbjct 13429 CAATCAGTCAAAGAAGTTTTTATGATGGTATGTCTCTAGGGATCTCTGGTACTTTCAATT 13370 Query 29129 ACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCG 29188 |||| | || || ||| | || |||||||| || ||||| || |||||| | |||| Sbjct 13369 TCATGATTGTATTTCAAACTGAGTGCAACATTCTTATCCACCCATTTCACATGTTAGGCG 13310 Query 29189 TTGCT 29193 | ||| Sbjct 13309 TAGCT 13305 >seq3463 Length=1425124 Score = 100 bits (110), Expect = 8e-17 Identities = 181/260 (70%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||||||||| |||| |||||||| ||||||| || | || ||| || | Sbjct 46909 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 46967 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| |||||||| | | || ||| | | |||||||| || || || Sbjct 46968 TTCTGTATTTATTATCACATTCATTACTGGTCCTCCATTAAATATTGATGGTATTCGTGA 47027 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGA- 28837 |||||| ||| | ||| || ||||||||||| || || || || ||| | | || | Sbjct 47028 ACCTGTTTCTGAATATCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 47087 Query 28838 -GCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | ||| || || || | ||||| ||||| || |||||||| || |||||||| Sbjct 47088 TTCTGCA--GCTATAGGTTTGCACTTTTACCCGATCTGGGAAGCGGCATCCTTTGATGAA 47145 Query 28897 TGGCTCTACAACGGGGGACC 28916 ||| | ||||| || || || Sbjct 47146 TGGTTATACAATGGCGGTCC 47165 >seq2858 Length=30610 Score = 93.3 bits (102), Expect = 1e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 29515 GGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTA 29574 |||||||| ||||| |||||||||||| || | || || |||||||| || | ||||| Sbjct 28627 GGTCGTGTAATTAACACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTT 28568 Query 29575 ATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGC 29615 || |||| ||||||||||| |||||||| || || || || Sbjct 28567 ATATATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 28527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146634661258344