Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06]
17,764 sequences; 369,781,828 total letters
Query= NC_027130.1
Length=172688
Score E
Sequences producing significant alignments: (Bits) Value
seq10784 574 5e-159
seq2871 351 1e-91
seq3494 300 2e-76
seq3513 224 1e-53
seq3501 172 6e-38
seq3512 145 8e-30
seq3405 140 4e-28
seq3314 129 6e-25
seq3301 109 6e-19
seq3463 107 2e-18
seq2858 93.3 5e-14
seq3421 91.5 2e-13
>seq10784
Length=1928
Score = 574 bits (636), Expect = 5e-159
Identities = 713/970 (74%), Gaps = 7/970 (1%)
Strand=Plus/Minus
Query 158406 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 158465
||||| || || | || ||||| || || ||||||| || || | ||| | |||||
Sbjct 1801 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1742
Query 158466 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 158524
||||| || || |||| ||| | |||||||| || || || || || || || |||||
Sbjct 1741 -TCTGTATTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 1683
Query 158525 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATC 158584
||| || |||| || || | ||||| ||||| || || |||||||| || | || |
Sbjct 1682 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1623
Query 158585 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 158644
||| || || ||| | ||||| || || ||||||||||| ||||| ||||||| ||
Sbjct 1622 TTCTGCAGCTATAGGTTTGCACTTTTACCCGATCTGGGAAGCGGCATCCGTTGATGAATG 1563
Query 158645 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGC 158704
| | || || || ||||||| |||| | || | |||||| | | || | |
Sbjct 1562 GTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 1503
Query 158705 ATATATGGGACGTGAATGGGAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGTGT 158764
|| ||||| ||||| ||||||||| | ||| | |||||||| || ||||| |||
Sbjct 1502 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCGTGGATTGCTGT 1443
Query 158765 AGCATATTCTGCACCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCA 158824
|||||||| || || || || || || | ||||| ||| | |||| || |||||||
Sbjct 1442 TGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCA 1383
Query 158825 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 158884
||| ||| || |||| ||||||||| || |||||||||||||| |||| |||| ||||
Sbjct 1382 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 1323
Query 158885 ATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGT 158944
|||||| || || |||||||| ||||||||||| || || ||| | || || ||||| ||
Sbjct 1322 ATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 1263
Query 158945 ATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTC- 159003
|||||| || || || ||| |||||||||||| | || ||||| | | | ||
Sbjct 1262 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTC-TAGTTTGATCA 1204
Query 159004 GTGAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAA 159063
| ||||| || |||| || || || | ||||||| ||||| ||||| |||||||
Sbjct 1203 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAA 1144
Query 159064 CATATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCAT 159123
| ||||||||||| || || |||||||| || || || |||||||||||||| ||| |
Sbjct 1143 CTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 1084
Query 159124 TCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGT 159183
|||||||||| ||||| || || |||||| | || || |||||||| || || |||||||
Sbjct 1083 TCAACAACTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCTGTAGTAGGTATCTGGT 1024
Query 159184 TCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGT 159243
|||| || | || | || ||||| |||||||| || |||||||| ||||||||||
Sbjct 1023 TCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAGT 964
Query 159244 CCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGTGCAG 159303
| | ||||| |||| |||||||| | ||||| ||||| ||| | | ||||||||
Sbjct 963 CTGTAGTTGATAGTCAAGGTCGTGTAATTAACACTTGGGCTGATATTATTAACCGTGCTA 904
Query 159304 GTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTT---G 159360
|| |||||||||||| ||||| ||||| || ||||||||||| || ||| | |
Sbjct 903 ACCTTGGTATGGAAGTTTGACATGAACGTAATGCTCACAACTTCCCTCTACACCCTCCGG 844
Query 159361 CTGCTGCTGA 159370
||| ||||||
Sbjct 843 CTGTTGCTGA 834
>seq2871
Length=25858
Score = 351 bits (388), Expect = 1e-91
Identities = 477/665 (72%), Gaps = 9/665 (1%)
Strand=Plus/Minus
Query 158706 TATATGGGACGTGAATGGGAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGTGTA 158765
|| ||||| ||||| ||||||||| | ||| | ||||||||||| ||||| |||
Sbjct 14609 TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCATGGATTGCTGTT 14550
Query 158766 GCATATTCTGCACCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAA 158825
|||||||| || || | | ||| ||| ||| | |||| || ||||||||
Sbjct 14549 GCATATTCAGCTCCTAT---TACAGT------TGTTTTCTTGATCTACCCAATCGGTCAA 14499
Query 158826 GGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTA 158885
|| ||| || |||| ||||||||| || |||||| ||| ||| |||| |||| |||||
Sbjct 14498 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTAGTATTTTCAACTTCATGATTGTA 14439
Query 158886 TTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTA 158945
|||||| | ||||||||||| ||| |||| || || || ||| | || || ||||| |||
Sbjct 14438 TTCCAAACTGAACACAACATTCTTGTGCATCCATTTCACATGTTAGGCGTAGCTGGTGTA 14379
Query 158946 TTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTCGT 159005
|||||||| || || ||| |||||||| || || || ||||| | | |
Sbjct 14378 TTCGGTGGCTCCCTATTCAGCGCTATGCACGGTTCCCTGGTAACTTCTAGTTTGATAAGG 14319
Query 159006 GAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACA 159065
||||| | |||| || || || | ||||||| ||||| ||||| ||||||||
Sbjct 14318 GAAACCATAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACT 14259
Query 159066 TATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTC 159125
||||||||||| | || |||||||| || || ||||| |||||||| | | |||
Sbjct 14258 TATAATATCGTAGGTGCTCATGGTTATTTTGGCTTATTGATATTCCAATATGTTAGTTTC 14199
Query 159126 AACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTC 159185
|||||||| | ||| || || |||||| | || || |||| ||| | | |||||||||
Sbjct 14198 AACAACTCTCATTCTTTACATTTCTTCTTAGCAGCTTGGCTTGTAGAAAGTATCTGGTTC 14139
Query 159186 ACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCC 159245
|| | | || | || ||||| |||||||| || | ||| || ||||||||||
Sbjct 14138 ACTACTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGATTTGAATTTCAACCAGTTT 14079
Query 159246 ATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGTGCAGGT 159305
| ||||| | | |||||||| | ||||| ||||| ||| | |||| ||||
Sbjct 14078 GTAGTTGATAATTAAGGTCGTGTAATTAACACTTGGGCTGATATTATGAATCGTGATAAC 14019
Query 159306 CTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGCTGCT 159365
|| | |||| ||||||||||||| |||| || ||||||||||| || ||||| || |||
Sbjct 14018 CTTGATATGAAAGTTATGCATGACTGTAATGCTCACAACTTCCCTCTAGACCTAGCAGCT 13959
Query 159366 GCTGA 159370
| |||
Sbjct 13958 GTTGA 13954
>seq3494
Length=2094846
Score = 300 bits (332), Expect = 2e-76
Identities = 390/534 (73%), Gaps = 10/534 (2%)
Strand=Plus/Minus
Query 158715 CGTGAATGGGAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCT 158774
||||| ||||||||| | ||| | |||||||| ||||| ||| ||||||||
Sbjct 1053973 CGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTATGTGGATTGCTGTTGCATATTCA 1053914
Query 158775 GCACCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATC--CTT--TCGGTCAAGGTTC 158830
|| | || || | ||||||| || |||||| ||| ||||||||||
Sbjct 1053913 AGTCCTATTGCAGCTACTACTGCTGTTTTT----TCTATCTACTTAATCGGTCAAGGAAG 1053858
Query 158831 TTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCA 158890
||| || |||| ||||||||| || |||||||||||||| |||| |||| |||||||| |
Sbjct 1053857 TTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCTA 1053798
Query 158891 AGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGG 158950
|| || |||||||| ||||||||||| || || ||| | || | ||||| |||||||
Sbjct 1053797 GGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGCATAGCTGGTGTATTCGA 1053738
Query 158951 TGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAA 159009
||| || || ||| |||||| ||||| | | || ||||| | | | || | ||||
Sbjct 1053737 TGGCTCGCTATTCAGTGCTATACATGGTTCTTTGGTAACTTC-TAGTTTGATCAGGGAAA 1053679
Query 159010 CGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATA 159069
| | |||| || || || | ||||| | ||||| ||||| |||||||| ||||
Sbjct 1053678 CCATAGAAAATGAATCTGCTAATGAAGGTTAAAGATTCGGTCAAGAGGAAGAAACTTATA 1053619
Query 159070 ATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACA 159129
||||||| || | |||||||| || || | |||||||||||||| ||| |||||||
Sbjct 1053618 ATATCGTAGCTGTTCATGGTTATTTTGGCCAATTGATCTTCCAATATGCTAGTTTCAACA 1053559
Query 159130 ACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCG 159189
|||| ||||| || | |||||| | || || |||||||| || || |||||||| || |
Sbjct 1053558 ACTCTCGTTCTTTATATTTCTTCTTAGCGGCTTGGCCTGTAGTAGGTATCTGGTTAACTG 1053499
Query 159190 CCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGT 159243
| | || | || ||||| |||||||| || |||||||| ||||||||||
Sbjct 1053498 CTTTAGGGATTAACACTATGGCCTTCAACCTAAATGGTTTCAATTTCAACCAGT 1053445
>seq3513
Length=3706331
Score = 224 bits (248), Expect = 1e-53
Identities = 367/525 (70%), Gaps = 3/525 (1%)
Strand=Plus/Minus
Query 158421 GGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGT 158479
|| ||||| || || ||||||| || || | ||| | ||||| | ||| || || |
Sbjct 2689311 GGATGGTTTGGTGTT-TGATGATCCCTACCTTATTGACCGCAACTTT-TGTATTTATTAT 2689254
Query 158480 CGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTC 158539
|| ||| | |||||||| || || || || || ||||| ||| |||| | |||| ||
Sbjct 2689253 TGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGCATTCGTAAACCGATTTCTGGATC 2689194
Query 158540 ACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGG 158599
|| | ||||| || || || || ||| |||| || | || |||| || || |
Sbjct 2689193 TCTACTTTATGGAAATAATATTATTTCTAGTGCCATTATTCCTACTTCTGCAGCTATAAG 2689134
Query 158600 TCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGG 158659
| | ||||| || || || |||||||| ||||| ||||||| ||| | || || || |
Sbjct 2689133 TTTGCACTTTTACCCGATTTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGA 2689074
Query 158660 TCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGA 158719
||||| |||| | || | |||||| | | || | | || |||| |||||
Sbjct 2689073 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGATCGTGA 2689014
Query 158720 ATGGGAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACC 158779
|| |||||| | ||| | |||||||| || ||||| ||| ||||||| || ||
Sbjct 2689013 GTGAGAACTTAGTTTCCGTCTGGGTATGCGTCCGTGGATTGCTGTTGCATATTTAGCTCC 2688954
Query 158780 AGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGA 158839
|| || || || | ||||| ||| | |||| || |||||||||| ||| | ||
Sbjct 2688953 TGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTTTGA 2688894
Query 158840 TGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACA 158899
|| ||||||||| || |||||| |||||| |||| |||| |||||||||| || || ||
Sbjct 2688893 TGGTATGCCTCTAGGAATCTCTAATACTTTCAACTTCATGATTGTATTCCAGGCTGAGCA 2688834
Query 158900 CAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGT 158944
|||||| ||||||||||| || || ||| | || || |||| ||
Sbjct 2688833 CAACATTCTTATGCACCCATTTCACATGTTAGGCGTAACTGGTGT 2688789
>seq3501
Length=2764102
Score = 172 bits (190), Expect = 6e-38
Identities = 225/312 (72%), Gaps = 7/312 (2%)
Strand=Plus/Minus
Query 159036 GGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTC 159095
||||||| ||| | ||||| ||||| || ||||||||||| || |||||||| ||
Sbjct 1162814 GGTTACAGATTCAGTCAAGAGGAAGAGACTTATAATATCGTAATTGCTCATGGTTATTTT 1162755
Query 159096 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 159155
|| || |||||||||||||| ||| ||||||| ||||| || | |||||| |
Sbjct 1162754 GGCCGCTTGATCTTCCAATATGCT-------ACAACTCTCGTTCTTTATATTTCTTCTTA 1162702
Query 159156 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTC 159215
| || |||||||| || | ||||||||||| || | || | || || | |||
Sbjct 1162701 ACAGCTTGGCCTGTAGTTCGTATCTGGTTCACTGCTTTAGGTATTAGCACTATATCTTTC 1162642
Query 159216 AACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAAC 159275
||| | || |||||||| |||||| |||| | ||||| || | ||| |||| | ||
Sbjct 1162641 AACTTAAATGGTTTCAATTTCAACGAGTCTGTAGTTGATAGTTAAGGTTGTGTAATTAAT 1162582
Query 159276 ACCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAAC 159335
|| |||| ||| | | |||| ||| || || |||||| |||||||||| |||||
Sbjct 1162581 ACGTGGGTTGATATTATTAACCATGCTAACCTTGGAATGGAAATTATGCATGAACGTAAT 1162522
Query 159336 GCACACAACTTC 159347
|| |||||||||
Sbjct 1162521 GCTCACAACTTC 1162510
>seq3512
Length=3897756
Score = 145 bits (160), Expect = 8e-30
Identities = 340/509 (67%), Gaps = 7/509 (1%)
Strand=Plus/Minus
Query 158840 TGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACA 158899
|| ||| ||| | || |||||||||||||| |||| ||| |||| || | || |
Sbjct 70255 TGGTATACCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTGTGTTTTAGATTGAGGA 70196
Query 158900 CAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCT 158959
|||||| |||||||| | || || ||| | | | | ||| ||||| ||| | |||
Sbjct 70195 CAACATTTTTATGCACACATTTCACATGTTAAGCATAGATGGTGTATTTTATGGCTTTCT 70136
Query 158960 TTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTCGTGAAA-CGACTGAAA 159018
|| ||||||| |||| | || ||||| | | | || |||| | || ||||
Sbjct 70135 ATTTAGTGCTATGAATGGTTCCTTAGTAACTTC-TATTTTGATCAAGAAAACCACAGAAA 70077
Query 159019 CAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCG 159078
|| | || | ||||| || || | ||||| ||| |||| |||||| | |
Sbjct 70076 ATGAATATGCTAATGAAGGTTAAAAATTTGATCAAGAGGAAAAAACTTATAAT----TAG 70021
Query 159079 CAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTT 159138
| || |||||||| | || | ||||||||| |||| ||| ||||||||||| ||||
Sbjct 70020 CTGCTCATGGTTATGTTGGCCAATTGATCTTCTAATATGCTAGTTTCAACAACTCTCGTT 69961
Query 159139 CCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCG 159198
| || || |||||| | | || |||||| | | || || || | || || | |
Sbjct 69960 CTTTACATTTCTTCTTAACAGCTTGGCCTATAATAGGTATTTGTGTTACTGCTTTAGATA 69901
Query 159199 TGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTC 159258
| | ||||| | || | | || | ||| || |||||||| || || ||||| |||
Sbjct 69900 TTAGCATTATGGCTTACAGCATAAATGCTTT-AATTTCAACCAATCTGTCGTTGATAGTC 69842
Query 159259 AGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAG 159318
| ||| || | | || || || || ||| | | |||||||| || ||||| ||
Sbjct 69841 AAGGTTGTATAATTAATACTTGAGCTGATATTATTAACCGTGCTAACCTTAGTATGAAAA 69782
Query 159319 TTATGCATGAGCGTAACGCACACAACTTC 159347
|||||||||| || | || |||||||||
Sbjct 69781 TTATGCATGAATGTCATGCTCACAACTTC 69753
>seq3405
Length=1277461
Score = 140 bits (154), Expect = 4e-28
Identities = 414/642 (64%), Gaps = 40/642 (6%)
Strand=Plus/Plus
Query 160276 TTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTCTTTGTCAGCGTATTCCTCATCTA 160335
||| ||||| ||||| ||||||||||| |||| ||| ||||| ||||||||| || ||
Sbjct 863005 TTATAATGCAATTGCATTCTCTGGTCCAATTGTTGTTTTTGTTTACGTATTCCTGATTTA 863064
Query 160336 CCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAG 160395
|||||| ||||| || |||||||| || | | ||||| || |||| || ||| |
Sbjct 863065 CCCATTAGGTCAATCTAGTTGGTTCTTTGTGTCTAGTTTTGGTGTAACAGCTATATTTCG 863124
Query 160396 ATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGCTTAACCCCTTCCATATGATGGG 160455
|||| | | || | ||| | |||||||| ||||| || ||
Sbjct 863125 ATTCATCCTCTTTTTCCAAAGGTTTCACAATTGGACTCT-----GCT------------- 863166
Query 160456 AGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCCATCCATGGCGTTACTGTAGAGAA 160515
||| ||| ||| ||| | || ||||| || || | ||
Sbjct 863167 -----CTGCTATGCTA----------TGC-----GTTATTCATGGTCCTATCATAAAAAA 863206
Query 160516 CACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCGACACAGGA 160575
|| | | ||| ||||| || ||||||| || || ||| | | || || |
Sbjct 863207 TACTTTATTTGAGGATGGCGATGGTGCAAATAAATTATGTGCTTTTAACCCAACTCAAGT 863266
Query 160576 AGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGC 160635
|||| | |||||| ||| ||||||| || || || ||||| || ||||| ||| ||||
Sbjct 863267 CAAAGAAATTTATTCAATGATCACTGCTAAACGTTTTTGGTCCCAAATCTTTGGTGTTGC 863326
Query 160636 GTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTG 160695
||||| || || || || | ||||| || ||||| ||||||| || | || | ||
Sbjct 863327 TTTTTCCAATAAACGCTGATTACATTTCTTTATGTTATTTGTGCTAGTAACTAGTTTATG 863386
Query 160696 GACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAG 160755
| | | || | | | ||||| ||| | || || |||| || || ||| |
Sbjct 863387 AATGTGTGCTCTTTGAGTAGTCGGTCTGGCTTTGAACCTATGTGCCTATGACTTCCTTTC 863446
Query 160756 TCAAGAGATTAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAGAACATCCT 160815
|| || | | |||||| ||||||| ||||||||||| |||| |||||| | || ||
Sbjct 863447 CCAGGAAACCTGTGCAGCAAAAGATCCTGAATTTGAGACTTTCTGCACCAAAACTATTCT 863506
Query 160816 ACTGAA-TGAAGGACTACGTGCATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTA 160874
| || |||| | | | ||| ||| | || || || || || | ||| ||| |||
Sbjct 863507 TTTAAACCGAAGTA-TTCATGCTTGGATGGCGGCTCAAGATCAGCCTCCTGAAAACCTTA 863565
Query 160875 TCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 160916
| ||| | | || ||||| || | | ||||| |||||||
Sbjct 863566 TATTCTCTAAGGAGGTTCTACCACGTGAAAACGCTCTTTAAT 863607
>seq3314
Length=478066
Score = 129 bits (142), Expect = 6e-25
Identities = 196/279 (70%), Gaps = 0/279 (0%)
Strand=Plus/Plus
Query 160274 CCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTCTTTGTCAGCGTATTCCTCATC 160333
||||| |||| ||||| ||||||||||| |||||| | ||||| ||||| | ||
Sbjct 267457 CCTTATAATGTAATTGCATTCTCTGGTCCAATTGCTATTTTTGTTTCTATATTCTTGATT 267516
Query 160334 TACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTT 160393
|||||||| ||||| | ||||||| || || || ||||| || ||| || ||
Sbjct 267517 TACCCATTAGGTCAATTTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAACAGTTATAATT 267576
Query 160394 AGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGCTTAACCCCTTCCATATGATG 160453
||||| | | || |||| || ||||| || | ||| | ||| | || |||||||||
Sbjct 267577 TGATTCATCCTATTTTTTCAGGGGTTTCATAATTAGACATTGAACTCATTTCATATGATG 267636
Query 160454 GGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCCATCCATGGCGTTACTGTAGAG 160513
|||||||| ||| || | || | || ||||| || || ||||| | ||| |||||
Sbjct 267637 GGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATACGCTATTCATGGTGCTACAGTAGAA 267696
Query 160514 AACACACTGTATGAAGATGGAGAACAAGCAAATACCTTT 160552
|| || | ||| ||||| || |||||||| |||
Sbjct 267697 AATACTTCATTTGAGGATGGTGATGGTGCAAATACATTT 267735
>seq3301
Length=291840
Score = 109 bits (120), Expect = 6e-19
Identities = 219/321 (68%), Gaps = 3/321 (1%)
Strand=Plus/Minus
Query 158619 TGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTC 158678
|| |||| |||| ||||||| ||| | || || |||||||||| |||| | ||
Sbjct 13622 TGAGAAGTAGCATTCGTTGATGAATGGTTATACAATGGTGGTCCTTGTGAACTAATTGTT 13563
Query 158679 TTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATACCGC 158738
|| ||||| ||| | | || || || ||||| ||| | | ||||| | ||
Sbjct 13562 TTACACTTACTTGGTGT-AGCT-TGT-TACATGGGCCGTAAGTAAAAACTTAGTTTCCAT 13506
Query 158739 TTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCAGTCGCTGCAGCATCTGCT 158798
|||||||||| | ||||| ||| |||||||| || | | || || | ||| |
Sbjct 13505 CTAGGTATGCGTCTGTGGATTACTGTTGCATATTCAGCTTCTATTGCAGCTGTTACTGGT 13446
Query 158799 GTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATC 158858
| ||| | |||| | || ||||| | ||| | |||| |||| |||| || |||
Sbjct 13445 ATTTTCTTGATCTACTCAATCAGTCAAAGAAGTTTTTATGATGGTATGTCTCTAGGGATC 13386
Query 158859 TCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCG 158918
||||||||||| || | |||| ||||||| ||| | || |||||| ||||| |||||
Sbjct 13385 TCTGGTACTTTCAATTTCATGATTGTATTTCAAACTGAGTGCAACATTCTTATCCACCCA 13326
Query 158919 TTCCATATGCTCGGTGTTGCT 158939
|| || ||| | || || |||
Sbjct 13325 TTTCACATGTTAGGCGTAGCT 13305
>seq3463
Length=1425124
Score = 107 bits (118), Expect = 2e-18
Identities = 195/283 (69%), Gaps = 2/283 (1%)
Strand=Plus/Plus
Query 158406 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 158465
||||| || || | || ||||| || || ||||||| || || | ||| | |||||
Sbjct 46909 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 46968
Query 158466 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 158524
||||| || || || | ||| | ||| ||| || | | || || || || |||||
Sbjct 46969 -TCTGTATTTATTATCACATTCATTACTGGTCCTCCATTAAATATTGATGGTATTCGTGA 47027
Query 158525 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATC 158584
||| || ||| | || | ||||| ||||| || || |||||||| || | || |
Sbjct 47028 ACCTGTTTCTGAATATCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 47087
Query 158585 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 158644
||| || || ||| | ||||| || || ||||||||||| ||||| ||||||| ||
Sbjct 47088 TTCTGCAGCTATAGGTTTGCACTTTTACCCGATCTGGGAAGCGGCATCCTTTGATGAATG 47147
Query 158645 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTC 158687
| | || || || ||||||| |||| | || | ||||||
Sbjct 47148 GTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTC 47190
>seq2858
Length=30610
Score = 93.3 bits (102), Expect = 5e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 159252 GATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGT 159311
||| | || |||||||| | ||||| ||||| ||| | | |||||||| || |||
Sbjct 28636 GATAGGCAAGGTCGTGTAATTAACACTTGGGCTGATATTATTAACCGTGCTAACCTTGGT 28577
Query 159312 ATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGCTGCTGCTGA 159370
||||||||||| |||| ||||| || ||||||||||| || ||||| || |||| |||
Sbjct 28576 ATGGAAGTTATATATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCGGCTGTTGA 28518
>seq3421
Length=1377396
Score = 91.5 bits (100), Expect = 2e-13
Identities = 161/233 (69%), Gaps = 10/233 (4%)
Strand=Plus/Plus
Query 160373 TTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACG 160432
||||| || ||||| || ||| ||||| | | || | || || ||||| || || ||
Sbjct 145965 TTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTACAGGGGTTTCATAATTGAACA 146024
Query 160433 CTTAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAG---T 160489
| ||||| || ||||||||||||||| | ||| || ||| ||||||||| | |
Sbjct 146025 TTGAACCCATTTCATATGATGGGAGTTACCGGTGTATTAG-----GCACTGCTCTGCTAT 146079
Query 160490 GCC--ATCCATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATA 160547
||| || ||||| | | ||| | || || | | ||| ||||| || |||||||
Sbjct 146080 GCCTTATTCATGGTGCGATCGTAAAAAATACTTTATTTGAGGATGGTGATGGTGCAAATA 146139
Query 160548 CCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACT 160600
| || | || ||| | | | || | ||||| |||||||| |||||||||
Sbjct 146140 CATTCCATGCTTTTAACCCAAATCAAGTCGAAGAAACTTATTCAATGGTCACT 146192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552350923237120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |