Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_028449.1 Length=63569 Score E Sequences producing significant alignments: (Bits) Value seq4995 295 3e-75 >seq4995 Length=1147 Score = 295 bits (326), Expect = 3e-75 Identities = 184/198 (93%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 9827 TTTCCAGTTCTGCTATGTGCTTACTTCCATCCGAGATAACGCCCTCGTAATACTCACGCT 9886 ||||||||| || || ||||||| |||||||||||||| || |||||||||||||||| Sbjct 767 TTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATACTCACGCT 708 Query 9887 GCTCGTTGAGTTTTGATTTTGCTGCTTCAAGCTCAACGCGCAGCTTCCCTACCGTTAGCG 9946 |||||||||||||||||||||||| |||||||||||| ||||| |||||||| ||||||| Sbjct 707 GCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCG 648 Query 9947 CAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 10006 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 647 CAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 588 Query 10007 CCAGCAGTGCCAGCGCAA 10024 |||||||| ||||| ||| Sbjct 587 CCAGCAGTTCCAGCACAA 570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203251986670120