Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_028685.1 Length=62851 Score E Sequences producing significant alignments: (Bits) Value seq4995 168 3e-37 >seq4995 Length=1147 Score = 168 bits (186), Expect = 3e-37 Identities = 176/226 (78%), Gaps = 14/226 (6%) Strand=Plus/Minus Query 7560 TCAAGCTCAACACGCAGCTTTCCTACCGTTAGCGCAATCTCCTCGTTCTCCTGGTCGCGC 7619 ||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||| Sbjct 681 TCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGG 622 Query 7620 TGTTTAATGTATTGCTGGTTTCTTTCCTGTTCATCCAGCAGTGCCAGCACAACCTGAGGT 7679 |||| ||||||||||||||||||||| |||||||||||||| ||||||||| | ||| Sbjct 621 CGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCACAATCGATGGT 562 Query 7680 GTGGC--TTTCATACGAAATGCCAG---CAATTTTTGAGGCGT--TGCTACTGTTTCAAT 7732 || | ||||| ||| | | | ||| | || ||| ||| | || Sbjct 561 GTTACCAATTCATGGAAAAGGTCTGCGTCAAATCCCCAGTCGTCATGC-ATTG-----CC 508 Query 7733 TGCTACTGCCGCCTCACGCAGTGCCTGGTAATTAATTTTGCTCACT 7778 |||| ||||||| |||||||||||||| | ||||||| ||||||| Sbjct 507 TGCT-CTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACT 463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200954884097648