Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq3410 89.7 4e-13 >seq3410 Length=967110 Score = 89.7 bits (98), Expect = 4e-13 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 118578 GGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGA 118637 ||| | |||||| || |||||||| |||||||||||||| | ||| |||| |||||| || Sbjct 225483 GGCGATATTAAATGGTACACCCAGGCCCATGTCTGCTGAGCGCTGATACATTTGGCATGA 225424 Query 118638 GAGCTCCCCGTTTGCAACATAAAACTG 118664 | |||||| || || ||||||||||| Sbjct 225423 TAACTCCCCATTGGCGACATAAAACTG 225397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414387066290896