Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06]
17,764 sequences; 369,781,828 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq17702 219 1e-51
seq3318 194 4e-44
seq3419 190 5e-43
seq2991 158 3e-33
seq3447 136 9e-27
seq3482 104 5e-17
seq3513 91.5 3e-13
seq3501 86.0 1e-11
seq2602 86.0 1e-11
seq850 86.0 1e-11
seq3446 84.2 5e-11
>seq17702
Length=19512
Score = 219 bits (242), Expect = 1e-51
Identities = 181/221 (82%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | || || |||||||| ||||| ||||| ||||||||||||||||| ||||||
Sbjct 11229 CGAAGGCGGAGCACGAGGTGAAGGGTGGATTCTTTCTGGATGTTATAATCCGCCAGGGTC 11170
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
|| ||||| ||||||||||| ||||| ||||| | ||||||||||| || || | |||
Sbjct 11169 CTGCCATCCTCCAGCTGCTTACCTGCAAAGATCAAACGTTGTTGGTCTGGTGGGATCCCT 11110
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||| ||||||||||| ||||| || || ||||| |||||||| || ||||| |||
Sbjct 11109 TCCTTATCCTGGATCTTCGCCTTCACATTGTCAATGGTATCAGAGCTCTCTACCTCCAGA 11050
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| |||||||| || || ||||| ||||| | ||||||
Sbjct 11049 GTGATGGTCTTTCCAGTTAGGGTCTTCACAAAAATCTGCAT 11009
Score = 215 bits (238), Expect = 1e-50
Identities = 175/212 (83%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || ||||||||||| || ||||| ||||| |||||||| | |||||
Sbjct 10536 AGGACAAGGTGGAGGGTGGACTCTTTCTGTATGTTGTAATCAGCAAGGGTACGACCATCC 10477
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||||||||| | || ||||||||||| | ||||| ||||||
Sbjct 10476 TCGAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTGTCC 10417
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| || | |||||||||||| |||||||| |||||||| |||
Sbjct 10416 TGAATCTTCGCCTTGACGTTATCAACGGTGTCAGAGCTCTCAACCTCAAGAGTGATGGTC 10357
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || |||||||| |||||||| | ||||||
Sbjct 10356 TTGCCGGTGAGAGTTTTTACAAAGATCTGCAT 10325
Score = 212 bits (234), Expect = 1e-49
Identities = 174/212 (82%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || ||||||||||| || ||||| ||||| |||||||| | |||||
Sbjct 10764 AGGACAAGGTGGAGGGTGGACTCTTTCTGTATGTTGTAATCAGCAAGGGTGCGACCATCC 10705
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||| ||||| | || ||||||||||| | ||||| ||||||
Sbjct 10704 TCGAGCTGCTTGCCGGCGAATATAAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTGTCC 10645
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| || |||||||||||||| |||||||| |||||||| |||
Sbjct 10644 TGAATCTTCGCCTTGACGTTATCAATGGTGTCAGAGCTCTCAACCTCAAGAGTGATGGTC 10585
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| ||||| | ||||||
Sbjct 10584 TTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 10553
Score = 179 bits (198), Expect = 9e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || || || |||||||| || || || || || || || |||||||| | ||| ||
Sbjct 10308 AGAACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAGTCAGCAAGGGTGCGTCCGTCC 10249
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| |||||||| || || |||||||||||||| | |||||||| ||
Sbjct 10248 TCCAGCTGCTTGCCCGCGAAGATCAGACGCTGTTGGTCAGGAGGTATCCCTTCCTTATCT 10189
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||||||| ||||||||| || || ||||| || || || ||||| ||||| || |||
Sbjct 10188 TGGATCTTTGCTTTCACGTTGTCAATAGTGTCTGAACTCTCGACCTCCAGAGTTATGGTC 10129
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || |||||||| || || || | |||||
Sbjct 10128 TTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 10097
Score = 168 bits (186), Expect = 2e-36
Identities = 170/221 (77%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | || || ||||| || || |||||||| || ||||| || || ||||| ||
Sbjct 11457 CGAAGACGAAGAACCAGGTGGAGGGTCGACTCTTTCTGAATGTTGTAGTCAGCAAGTGTT 11398
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| |||||||||| |||||| ||||| ||||| | ||||| ||||| || || | |||
Sbjct 11397 CGCCCATCTTCCAACTGCTTCCCTGCAAAGATCAACCGTTGCTGGTCTGGTGGGATACCT 11338
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||| ||||| ||||| ||||| || || |||||||||||||| || ||||||||
Sbjct 11337 TCCTTATCCTGAATCTTAGCCTTCACATTGTCTATGGTGTCAGAGCTCTCCACCTCGAGG 11278
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || || | ||||| ||||| | ||||||
Sbjct 11277 GTAATGGTCTTGCCTGTCAAGGTCTTCACAAAAATCTGCAT 11237
>seq3318
Length=237370
Score = 194 bits (214), Expect = 4e-44
Identities = 170/212 (80%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || |||||||| || |||||||||||||| || | ||||| ||||||
Sbjct 46824 AGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAATCAGCCAAAGTCCTGCCATCT 46765
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || |||||||| || | || ||||| || || | |||||||| |||
Sbjct 46764 TCCAGCTGCTTCCCAGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATCCCTTCCTTATCC 46705
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || || ||||||||| ||| |||||||| || |||||||||
Sbjct 46704 TGGATCTTAGCCTTCACATTGTCAATGGTGTCACTGCTCTCAACCTCAAGGGTGATCGTC 46645
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || || | ||||||
Sbjct 46644 TTCCCGGTAAGGGTCTTGACGAAGATCTGCAT 46613
Score = 167 bits (184), Expect = 5e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| ||||| || || ||||||||||| ||||| || ||||| | || |||
Sbjct 45684 AGAACAAGGTGGAGAGTCGATTCCTTTTGGATGTTGTAATCGGCTAGGGTACGGCCGTCT 45625
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||| || || |||||||| || || || ||||| || || | ||||| ||||||
Sbjct 45624 TCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGTGGGATCCCTTCTTTGTCC 45565
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||||||||| ||| || ||||| | ||||| |||
Sbjct 45564 TGGATCTTAGCCTTAACGTTGTCGATGGTGTCGCTGCTCTCCACCTCCAAGGTGATGGTC 45505
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| || || | ||||||
Sbjct 45504 TTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 45473
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || |||||||| || ||||| || ||||||||||| || || | ||
Sbjct 46606 ACGAAGACGAAGAACCAGGTGAAGGGTCGACTCCTTCTGGATGTTATAGTCAGCCAATGT 46547
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| || || ||||||||||| || |||||||| | | || ||||| || || | ||
Sbjct 46546 CCTGCCGTCCTCCAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGGATCCC 46487
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || ||||| || |||||||| ||| || ||||||||
Sbjct 46486 CTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGCTGCTCTCTACCTCGAG 46427
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||||||||| || || || ||||| || || | ||||||
Sbjct 46426 GGTGATCGTCTTCCCTGTAAGGGTCTTGACGAAGATCTGCAT 46385
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || || || || || ||||| || || |||||||| || || |||||
Sbjct 46150 ACGAAGACGGAGAACCAGATGGAGGGTTGACTCCTTCTGAATGTTATAGTCGGCGAGGGT 46091
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| || || || |||||||| || |||||||| || | || ||||| || || | ||
Sbjct 46090 CCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATGCC 46031
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || ||||| || || ||||| ||| || ||||||||
Sbjct 46030 CTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATTGTGTCGCTGCTCTCTACCTCGAG 45971
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||||||||| ||||| || ||||| || || | ||||||
Sbjct 45970 GGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAGATCTGCAT 45929
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || || || || || ||||| || || |||||||| || || |||||
Sbjct 46378 ACGAAGACGGAGAACCAGATGGAGGGTCGACTCCTTCTGAATGTTATAGTCGGCGAGGGT 46319
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| || || || |||||||| || |||||||| || | || ||||| || || | ||
Sbjct 46318 CCTGCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATGCC 46259
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || ||||| || |||||||| ||| || ||||||||
Sbjct 46258 CTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGCTGCTCTCTACCTCGAG 46199
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||||||||| || || || ||||| || || | ||||||
Sbjct 46198 GGTGATCGTCTTCCCTGTAAGGGTCTTGACGAAGATCTGCAT 46157
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || || || || |||||||| |||||||| | |||||| || ||
Sbjct 45912 AGCACCAAGTGGAGGGTCGATTCCTTCTGGATGTTGTAATCCGCCAAGGTCCTGCCGTCC 45853
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| || | || ||||| || || | || ||||| |||
Sbjct 45852 TCGAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCC 45793
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || || ||||| || |||||||| || |||||||||
Sbjct 45792 TGGATCTTGGCCTTAACGTTGTCAATTGTGTCGCTGCCCTCAACCTCAAGGGTGATCGTC 45733
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || ||||| || || | ||||||
Sbjct 45732 TTACCCGTTAGGGTCTTGACGAAGATCTGCAT 45701
>seq3419
Length=773737
Score = 190 bits (210), Expect = 5e-43
Identities = 176/223 (79%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||||| |||||||| || || |||||||| || |||||||| ||||| || |||||
Sbjct 376653 ACGAAGTCGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCCAGGGT 376712
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||| ||||||||||| ||||| ||||| | | || || |||||||||| ||
Sbjct 376713 ACGTCCATCCTCCAGCTGCTTACCTGCAAAGATCAACCTCTGCTGATCAGGAGGAATACC 376772
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|| ||||| |||||||| ||| || || || || || ||||| || |||||||||||
Sbjct 376773 CTCTTTGTCTTGGATCTTAGCTTTGACATTATCAATTGTATCAGAACTCTCAACCTCGAG 376832
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||| || || ||||| || || ||||| ||||| | |||||||
Sbjct 376833 AGTAATGGTTTTTCCTGTCAGCGTCTTCACAAATATCTGCATT 376875
Score = 179 bits (198), Expect = 9e-40
Identities = 173/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||||||||| ||||| || || ||||| ||||| || || || | |||
Sbjct 381076 ACGAAGACGAAGGACAAGGTGCAGAGTTGATTCCTTTTGAATGTTGTAGTCTGCCAAGGT 381135
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| ||||| || |||||||| || || ||||| | | || ||||| || || | |||
Sbjct 381136 CCTCCCATCCTCTAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCGGGTGGGATTCC 381195
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| ||||| ||| || ||||| || ||||||||||| ||||| ||||| |
Sbjct 381196 CTCCTTGTCTTGGATTTTTGCCTTTACGTTATCAATGGTGTCAGAACTTTCCACCTCCAA 381255
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| |||||||| || | |||||| ||||| | ||||||
Sbjct 381256 AGTGATAGTCTTTCCTGTCAAAGTCTTAACAAAAATCTGCAT 381297
Score = 165 bits (182), Expect = 2e-35
Identities = 169/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|||||||| || || | ||| || ||||| || ||||||||||| || || ||||||||
Sbjct 377110 CGAAGTCTAAGTACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTA 377169
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| |||||||| ||||| || ||||| |||||||| | || || || || || | ||||
Sbjct 377170 CGACCATCTTCAAGCTGTTTTCCTGCAAAGATAAGCCTCTGCTGATCTGGTGGGATTCCT 377229
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||| || |||||||| ||| || || || || || ||||| || || ||||| |
Sbjct 377230 TCCTTATCTTGGATCTTGGCTTTTACATTGTCAATTGTATCAGAACTCTCGACCTCCAAG 377289
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || || |||||||| ||||| | ||||||
Sbjct 377290 GTTATAGTCTTCCCTGTCAGAGTCTTAACAAATATCTGCAT 377330
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| |||| || || | ||| || || |||||||| |||||||| || || ||||| ||
Sbjct 381532 ACGGAGTCGAAGCACCAAGTGTAGGGTTGACTCTTTCTGGATGTTGTAGTCAGCAAGAGT 381591
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||||||||||| || ||||| || || || || | | ||||||||| || || | |||
Sbjct 381592 TCTTCCATCTTCAAGTTGCTTACCAGCAAATATTAACCTTTGTTGGTCCGGTGGGATTCC 381651
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| || || || || || || || ||||| ||||| ||||||| || |
Sbjct 381652 CTCCTTGTCTTGAATTTTGGCCTTAACATTATCAATGGTATCAGAACTTTCAAATTCCAA 381711
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || |||||||| ||||||||||| ||||| | |||||
Sbjct 381712 AGTAATGGTCTTTCCAGTGAGAGTCTTCACAAAAATTTGCAT 381753
Score = 154 bits (170), Expect = 3e-32
Identities = 158/204 (77%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| ||||| ||||| || || ||||| ||||| || | |||||| ||||| |||| ||||
Sbjct 376900 TGGAGAGTTGACTCCTTCTGAATGTTGTAATCAGCTAAGGTCCTCCCATCCTCCAACTGC 376959
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || || || || | |||||||| || |||| ||||||||||| ||||| |||
Sbjct 376960 TTACCAGCAAAAATCAGCCTCTGTTGGTCTGGTGGAATCCCTTCCTTGTCTTGGAT-TTT 377018
Query 211032 TGT-TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| || || || || ||||| || || |||||||| || | ||||| ||||| || ||
Sbjct 377019 AGTCTTGACATTGTCAATGGTATCTGAACTTTCAACTTCCAAGGTGATTGTCTTCCCAGT 377078
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
|||||||| ||||| | ||||||
Sbjct 377079 AAGAGTCTTCACAAAAATCTGCAT 377102
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | ||| || || || || |||||||| ||||| || ||||||||
Sbjct 381304 ACGAAGACGGAGCACCAAGTGGAGTGTAGATTCCTTTTGGATATTATAGTCTGCAAGGGT 381363
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
|||||||| || |||||||| || || || || || | ||||||||| || || | ||
Sbjct 381364 TCTTCCATCCTCAAGCTGCTTACCAGCAAATATGAGCCTTTGTTGGTCTGGTGGGATACC 381423
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||||||||| ||| || || || || || || ||||| || ||||| || |
Sbjct 381424 CTCCTTGTCCTGGATTTTTGCCTTGACATTGTCAATAGTATCAGAACTCTCAACTTCCAA 381483
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| || || || || |||||||| || || | |||||
Sbjct 381484 AGTGATGGTTTTCCCAGTAAGAGTCTTAACGAAAATTTGCAT 381525
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||| |||||||| || || || || ||||| ||||| || | ||||||
Sbjct 377574 AGAACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCTGCAAGAGTGCGACCATCT 377633
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||| ||||| || || || | | ||| || || || |||| ||||||||||||
Sbjct 377634 TCAAGCTGTTTGCCAGCAAATATCAACCTTTGCTGATCTGGTGGAATACCTTCCTTGTCC 377693
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| |||||| ||| || || || || |||||||| |||||||| || | ||||| ||
Sbjct 377694 TGAATCTTTGCTTTGACATTGTCAATTGTGTCAGAACTTTCAACTTCCAATGTGATAGTT 377753
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || || || || | ||||||
Sbjct 377754 TTACCGGTCAGGGTTTTCACGAAAATCTGCAT 377785
Score = 145 bits (160), Expect = 2e-29
Identities = 166/222 (75%), Gaps = 1/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | ||||||||| ||||| || || ||||| || || |||||| |
Sbjct 377337 ACGAAGGCGAAGCACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGG-T 377395
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| |||||||| ||||| ||||| || || || | | || || ||||| || | |||
Sbjct 377396 CCTGCCATCTTCTAGCTGTTTGCCCGCAAATATCAACCTCTGCTGATCAGGGGGGATTCC 377455
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||| ||||| ||| || || || || |||||||| || || || || ||
Sbjct 377456 CTCCTTGTCCTGAATCTTGGCTTTAACATTATCAATTGTGTCAGAACTCTCCACTTCCAG 377515
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || ||||| || || ||||| | |||||
Sbjct 377516 TGTGATGGTTTTCCCAGTGAGGGTTTTCACAAAGATTTGCAT 377557
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| ||||||||||| || || || || || | |||||
Sbjct 377802 AGAACCAAGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCAGCCAGAGTGCGGCCATCC 377861
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||| ||||| || || || | | || ||||| ||||| | ||| ||||| |||
Sbjct 377862 TCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGGTCTGGAGGGATTCCCTCCTTATCC 377921
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || || || || || ||||||||||| ||||||||||| |||| |||
Sbjct 377922 TGAATCTTAGCCTTGACATTATCAATAGTGTCAGAGCTCTCAACCTCGAGGGTGACGGTC 377981
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || || ||||| | |||||
Sbjct 377982 TTGCCAGTAAGTGTTTTCACAAAGATTTGCAT 378013
Score = 96.9 bits (106), Expect = 8e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955
||| | |||| ||||||||||||| |||||||| || ||||||||||| ||||| |||||
Sbjct 381763 AAGACGTAGGTCAAGGTGAAGAGTAGACTCTTTATGAATGTTATAATCAGCAAGAGTCCT 381822
Query 210956 TCCATCTTCCAGCTGCTTGCC 210976
||||| ||| |||||||| ||
Sbjct 381823 TCCATGTTCAAGCTGCTTACC 381843
>seq2991
Length=32481
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || || || || || ||||| || ||||| |||||||| || ||||| | |||||
Sbjct 26328 AGAACGAGATGCAGTGTTGACTCCTTCTGGATATTATAATCGGCGAGGGTACGACCATCC 26269
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| || || || ||||| || |||| || |||||||||
Sbjct 26268 TCAAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 26209
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || |||||||| |||||| || ||||| || || || |||
Sbjct 26208 TGGATCTTGGCCTTCACATTGTCGATGGTATCAGAGGACTCTACCTCTAGGGTTATGGTC 26149
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| | ||||| || || | |||||| ||
Sbjct 26148 TTACCCGTCAAGGTCTTGACGAAGATCTGCATCTT 26114
>seq3447
Length=1078458
Score = 136 bits (150), Expect = 9e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || ||||| || || ||||||||||| ||||| || || | || ||
Sbjct 808044 AGAACCAGGTGCAGTGTGGATTCCTTCTGGATGTTATAGTCCGCGAGCGTGCGGCCGTCC 808103
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || || || |||||||| || || || || ||||| || || | ||| ||||| |||
Sbjct 808104 TCGAGTTGTTTCCCTGCGAAAATCAGCCGCTGCTGGTCTGGTGGGATTCCCTCCTTATCC 808163
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || ||||| || || || |||||||| || || || |||
Sbjct 808164 TGGATCTTCGTCTTCACATTGTCGATCGTATCCGATGACTCAACCTCTAGGGTTATGGTC 808223
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || || || || || || | |||||||||
Sbjct 808224 TTCCCGGTTAGGGTTTTCACGAATATCTGCATTTT 808258
>seq3482
Length=2130385
Score = 104 bits (114), Expect = 5e-17
Identities = 95/120 (79%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
|||||| || ||||| ||||| || || ||||| ||||| ||||| || | ||||||||
Sbjct 21997 GACAAGATGGAGAGTAGACTCGTTCTGAATGTTGTAATCTGCAAGTGTTCGACCATCTTC 21938
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
|| || || || || || || | | |||||||||||||||| |||||||||||||||
Sbjct 21937 CAATTGTTTCCCAGCAAATATCAACCTCTGTTGGTCAGGAGGAATTCCTTCCTTGTCCTG 21878
>seq3513
Length=3706331
Score = 91.5 bits (100), Expect = 3e-13
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 211008 ACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACC 211067
|| |||||||||||||||||||| ||| || || ||||| ||||| | |||||||
Sbjct 1010876 ACACCTTCCTTGTCCTGGATCTTCGCTTTGACATTGTCGATTGTGTCGCTGGATTCAACC 1010817
Query 211068 TCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || || |||||||| ||||| || || || || | |||||||||
Sbjct 1010816 TCTAGGGTTATGGTCTTTCCGGTGAGCGTTTTCACGAAGATCTGCATTTT 1010767
>seq3501
Length=2764102
Score = 86.0 bits (94), Expect = 1e-11
Identities = 147/212 (69%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGA-TGTTATAATCCGCAAGGG 210951
|||||| | ||||||| ||| ||||| || | ||||| | ||||||| || | |
Sbjct 297365 ACGAAGACAAAGGACAAAGTGCAGAGTTGATTTTTTTTTTAATGTTATAGTCTACCAAAA 297424
Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011
|||| || || || ||||||| ||| ||||| | || | |||| | || | |
Sbjct 297425 TCCTCCCGTCCTCTAGCTGCTCCTCTGTAAAGATCAAATTTTACTAGTCAAGTGGGATCC 297484
Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071
| || ||||| ||||| | || || || || || | | ||| ||||||||||| |
Sbjct 297485 CCTCATTGTCTTGGATTTCGGCCTTTACATTATCAATATTTTTAGAACTTTCAACCTCTA 297544
Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103
|||||| |||||||| || | |||||| |||
Sbjct 297545 AAGTGATAGTCTTTCCTGTCAAAGTCTTAACA 297576
>seq2602
Length=21628
Score = 86.0 bits (94), Expect = 1e-11
Identities = 129/182 (71%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 139807 CTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAG 139866
|| ||||||||||| || |||||||| ||||| ||||| || |||| | ||||||| |
Sbjct 14548 CTCCCAAAGAAGCATGGCAGAGGAGGGCAATCAGCTCTTCGATTTGCTCGTCTTCGAATG 14607
Query 139867 GAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAA- 139925
|| ||| | || ||||| ||||||| ||||| || | ||||| |||||||||
Sbjct 14608 GAGAAGCGCCATAACTATGTGAGAAAGACAGCAGAACTTGCTACACAGTTTTTTATCAAT 14667
Query 139926 ----AGA-CAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAG 139980
|| || | | | ||||||||| | || | || || || ||||| ||||||
Sbjct 14668 CCCTCGACCAGCCAACCTAATGTTTCTGGACTAATTCTTGCTGGATCAGCAGACTTCAAG 14727
Query 139981 AC 139982
||
Sbjct 14728 AC 14729
>seq850
Length=5658
Score = 86.0 bits (94), Expect = 1e-11
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| | ||| || || ||| | || || || || | | ||||| ||||
Sbjct 3944 AGGACAAGGTGCAAAGTTGATTCCTTTAGAATTTTGTAGTCTACTAAAGTCCTCTCATCC 3885
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| | ||||| || | ||||| | | || |||||| || || || |||||
Sbjct 3884 TCTAATTGCTTCCCAACTAAGATTAACCTTTACTGGTCAATTGGGCTCCCCTCTTTGTCT 3825
Query 211023 TGGATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081
||||| ||| || || || || | |||||||||||| |||| ||||| | |||||| |
Sbjct 3824 TGGAT-TTTAGTCTTTACATTAACAATGGTGTCAGAGGTTTCTACCTCCAAAGTGATAGC 3766
Query 211082 CTTTCCCGTGAGAGTCTTTACAAA 211105
|||||| | | ||| || |||||
Sbjct 3765 CTTTCCTATCAAAGTTTTAACAAA 3742
>seq3446
Length=1073727
Score = 84.2 bits (92), Expect = 5e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 139807 CTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAG 139866
||||| |||||||| ||||| ||||||||||| ||||| || |||| | ||||| | |
Sbjct 239842 CTTCCGAAGAAGCATGGAAGGGGAGGACAATCAGCTCTACGGTTTGCTCGTCTTCGGATG 239901
Query 139867 GAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAA 139925
|| || | |||||||| |||| || ||||||| || | ||||| ||| |||||
Sbjct 239902 GAGAAACGTCACAACTATGTGAGGAAGACTGCAGAGCTTGCCACACAGTTTTTCATCAA 239960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158888175555860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |