Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_031019.1 Length=41809 Score E Sequences producing significant alignments: (Bits) Value seq4995 174 4e-39 >seq4995 Length=1147 Score = 174 bits (192), Expect = 4e-39 Identities = 111/121 (92%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 34638 TTTTGCTGCTTCCAGCTCAACTCGCAGCTTCCCAACCGTAAGCGCAATATCCTCGTCCTC 34697 |||||||| ||| |||||||| ||||| ||||| || || |||||||||||||||| ||| Sbjct 691 TTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCGCAATATCCTCGTTCTC 632 Query 34698 CTGGTCGCGGAGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTGCCAGCAC 34757 |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 631 CTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCATCCAGCAGTTCCAGCAC 572 Query 34758 A 34758 | Sbjct 571 A 571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133639003238328