Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq4995 780 0.0 >seq4995 Length=1147 Score = 780 bits (864), Expect = 0.0 Identities = 434/435 (99%), Gaps = 0/435 (0%) Strand=Plus/Minus Query 82690 ATATCACTCTCCTTTGATGCGAATGCCAGCGTCAGACATCATATGCAGATACTCACCTGC 82749 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1015 ATCTCACTCTCCTTTGATGCGAATGCCAGCGTCAGACATCATATGCAGATACTCACCTGC 956 Query 82750 ATCCTGAACCCATTGACCTCCAACCCCGTAATAGCGATGCGTAATGATGTCGATAGTTAC 82809 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 955 ATCCTGAACCCATTGACCTCCAACCCCGTAATAGCGATGCGTAATGATGTCGATAGTTAC 896 Query 82810 TAACGGGTCTTGTTCGATTAACTGCCGCAGAAACTCTTCCAGGTCACCAGTGCAGTGCTT 82869 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 895 TAACGGGTCTTGTTCGATTAACTGCCGCAGAAACTCTTCCAGGTCACCAGTGCAGTGCTT 836 Query 82870 GATAACAGGAGTCTTCCCAGGATGGCGAACAACAAGAAACTGGTTTCCGTCTTCACGGAC 82929 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 835 GATAACAGGAGTCTTCCCAGGATGGCGAACAACAAGAAACTGGTTTCCGTCTTCACGGAC 776 Query 82930 TTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATA 82989 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 775 TTCGTTGCTTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATA 716 Query 82990 CTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTAC 83049 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 715 CTCACGCTGCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTAC 656 Query 83050 TGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTC 83109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 655 TGTTAGCGCAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTC 596 Query 83110 CCGTTCATCCAGCAG 83124 ||||||||||||||| Sbjct 595 CCGTTCATCCAGCAG 581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330827560736824