Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27] 463,906 sequences; 661,937,708 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq25275 91.5 1e-13 >seq25275 Length=8276 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 |||||||| || | || ||| ||||||||| | |||||||| ||||| || || || Sbjct 5340 GATAAAGAGGGAATCCCACCAGACCAACAAAGATTGATCTTTGCCGGCAAGCAGCTTGAG 5399 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | || | || || ||||| |||||||||||||| || |||||| ||||| | Sbjct 5400 GATGGCCGTACCCTTGCAGACTACAACATTCAGAAGGAATCAACCCTTCACTTGGTGCTT 5459 Query 29175 CGATTACGAGGAGGG 29189 ||||| |||| ||| Sbjct 5460 CGATTGAGAGGTGGG 5474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425914250632430