Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq284040 113 4e-20
seq259261 113 4e-20
seq228143 113 4e-20
seq156932 107 2e-18
seq25275 107 2e-18
seq243249 105 6e-18
seq268484 104 2e-17
seq141081 102 7e-17
seq277754 95.1 1e-14
seq13062 95.1 1e-14
seq118537 93.3 4e-14
seq62239 91.5 1e-13
>seq284040
Length=2693
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || |||| ||||||| ||| | ||| || ||||| || ||||| ||||||||
Sbjct 529 CCGCCGCGAAGCCGTAGCACCAGATGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGCT 470
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| | ||||||||||||| || || || | || || | |||||| || ||
Sbjct 469 AGGGTTCTGCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGA 410
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| |||||| || || | | ||| ||||| | |||
Sbjct 409 ATTCCTTCCTTGTCCTGGATCTTCGCCTTGACATTGTCGATCGTATCGGAGCTCTCGACC 350
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || || || |||||||||| |||||||| || || |||||
Sbjct 349 TCCAGAGTGATTGTTTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 303
Score = 109 bits (120), Expect = 5e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037
||| |||||||| || ||||| |||||||| |||||| | ||||||||||||| || ||
Sbjct 728 AGTCGACTCCTTCTGGATGTTGTAGTCCGCTAGGGTTCTGCCGTCCTCCAGCTGCTTCCC 669
Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097
|| | || || | |||||| ||| || | ||||||||||| |||||| ||
Sbjct 668 GGCGAAGATGAGACGCTGCTGATCCGGAGGAATTCCTTCCTTGTCCTGGATCTTCGCCTT 609
Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157
|| | ||| ||||| | ||| |||| || |||||||||||||||| ||
Sbjct 608 GACGTTATCGATCGTATCGGAGCTCTCGACCTCCAGAGTGATGGTCTTGCCGGTTAGGGT 549
Query 21158 TTTGACAAATATTTGCAT 21175
|||||| || || |||||
Sbjct 548 TTTGACGAAGATCTGCAT 531
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | |||| ||||||||||| || ||||| || |||||||| || || | ||
Sbjct 1198 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCCGCCAGAGTCCGGCCATCT 1139
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||||||| || || ||| | || | |||||||||||| || | || || || ||
Sbjct 1138 TCCAGCTGCTTTCCGGCAAATATCAACCTCTGCTGGTCCGGTGGAATCCCCTCTTTATCC 1079
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||||| || || | ||| ||||| | |||| |||| ||||| |||
Sbjct 1078 TGAATCTTGGCCTTGACATTATCGATCGTATCGGAGCTCTCCACCTCCAGAGTAATCGTC 1019
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| ||||| ||||| || || ||||| |||||
Sbjct 1018 TTCCCGGTCAACGTCTTCACGAATATCTGCAT 987
>seq259261
Length=7884
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| || | ||||||||||| || ||||| ||||| ||
Sbjct 2602 CCACCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCT 2543
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | ||||||| |||||||| || || | || || | |||||||||| ||
Sbjct 2542 AGGGTCCTGCCGTCCTCGAGCTGTTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 2483
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| |||||| ||||| | | ||| || || || ||
Sbjct 2482 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAGGATTCGACC 2423
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178
|||| || || ||||| || |||| ||||| || || || ||||||||
Sbjct 2422 TCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 2373
>seq228143
Length=6931
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | || |||||||| || ||||| ||||| ||
Sbjct 2867 CCACCACGAAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCA 2808
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| || |||| |||||||| || || || ||||||||||||||||||| ||
Sbjct 2807 AGGGTTCGGCCGTCTTCCAGCTGCTTTCCGGCGAAAATAAGTCTCTGCTGGTCTGGAGGG 2748
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||| ||||| |||||| || || | | | | || || | || |
Sbjct 2747 ATGCCTTCTTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCAACT 2688
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || |||||||| ||||| || ||||| ||||| || |||||
Sbjct 2687 TCTAATGTGATGGTCTTTCCGGTCAAGGTTTTCACAAAAATCTGCAT 2641
Score = 109 bits (120), Expect = 5e-19
Identities = 101/128 (79%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
|| |||| ||| | ||||| ||||| || ||||| ||||| || |||||| || |||||
Sbjct 2624 AGGACCAAATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGCGAGGGTTCGGCCGTCC 2565
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| |||||||| || ||| | || |||||||||||||| ||| | ||||||||||||
Sbjct 2564 TCGAGCTGTTTACCGGCAAAGATGAGTCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCT 2505
Query 21084 GCGATCTT 21091
||||||
Sbjct 2504 TGGATCTT 2497
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| ||| | || |||||||| || ||||| ||||| ||
Sbjct 3095 CCACCACGAAGACGGAGGACCAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 3036
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| || | || ||||||||||| || ||| | || | ||||| ||||| ||
Sbjct 3035 AGGGTTCGGCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGTTGGTCTGGTGGG 2976
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||| || |||||| |||||| | | | || || |||
Sbjct 2975 ATGCCTTCCTTATCTTGGATCTTAGCTTTCACATTATCAATGGTGTCTGAACTCTCAACC 2916
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || |||||||| ||||| || || || || || || |||||
Sbjct 2915 TCCAAAGTGATGGTCTTTCCGGTCAAGGTCTTAACGAAAATCTGCAT 2869
>seq156932
Length=6713
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | || |||||||| || ||||| ||||||||
Sbjct 3985 CCACCACGGAGACGGAGGACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCCGCA 4044
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || ||||||| || ||||| || || | || | || ||||||||| |||
Sbjct 4045 AGAGTACGGCCGTCCTCGAGTTGTTTACCGGCGAAGATCAATCGCTGCTGGTCTGGGGGG 4104
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| |||||| || || | | ||| || ||| | || |
Sbjct 4105 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTTTCTACT 4164
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || ||||| |||||||| || || ||||| || ||||||||
Sbjct 4165 TCAAGAGTGATGGTTTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 4211
Score = 102 bits (112), Expect = 7e-17
Identities = 162/228 (71%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009
|||||| | ||| ||||| | ||||| || || ||||| || ||||| || ||||| |
Sbjct 3760 CCCCTC--AACCTCAGCACAAGATGCAGGGTCGATTCCTTCTGGATGTTGTAATCCGCAA 3817
Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069
| || | | || ||||||||||| || ||| | || ||||| || ||||| || |
Sbjct 3818 GAGTCCGCCCATCTTCCAGCTGTTTTCCGGCAAAGATGAGTCTTTGTTGGTCTGGTGGGA 3877
Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC-CG-T 21127
||||||||||| ||||| |||||| | | ||| |||| ||| |||| ||
Sbjct 3878 TTCCTTCCTTGTCTTGAATCTTGGCTTTCACGTTGTCGATGGTAT--CCGAGCTCTCGAC 3935
Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| || || ||||| || || | |||||||| || || |||||
Sbjct 3936 TTCCAAAGTGATCGTCTTCCCAGTGAGGGTTTTGACGAAAATCTGCAT 3983
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | |||||||||||||| ||||| ||||| ||
Sbjct 4213 CCACCGCGGAGACGGAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCT 4272
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| || ||||||| |||||||| || ||| | || || |||||||| || ||
Sbjct 4273 AGAGTTCGGCCGTCCTCGAGCTGTTTACCGGCAAAGATCAGCCTCTGCTGATCTGGAGGA 4332
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| |||||| || || | | | | ||||| |||
Sbjct 4333 ATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATTGTATCGGAACTCTCGACC 4392
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || ||||||||||| || | || || || ||||| |||||
Sbjct 4393 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCAT 4439
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | || || | || | ||| |||||||| || || || || |||||
Sbjct 3529 CCACCACGCAGACGAAGAACAAGGTGAAGAGTCGACTCCTTCTGGATATTGTAATCCGCA 3588
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | | ||||||| ||| || || || | || | ||||||||||| ||
Sbjct 3589 AGAGTACGACCATCCTCCAACTGCTTCCCTGCGAATATCAACCTCTGCTGGTCTGGTGGA 3648
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||| || |||||| ||||| | | | | ||||| | ||||
Sbjct 3649 ATCCCTTCCTTATCCTGAATCTTTGCCTTCACATTGTCAATGGTATCCGAGCTCTCCACC 3708
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||| || ||||| |||||||| || ||||| || || |||||
Sbjct 3709 TCCAAGGTGATCGTCTTCCCGGTTAAAGTCTTGACGAAAATCTGCAT 3755
>seq25275
Length=8276
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|| |||||||| || ||||||||||| || || || || ||||||| ||||| || ||
Sbjct 4987 GTTGACTCCTTCTGGATGTTATAGTCGGCAAGAGTACGGCCGTCCTCGAGCTGCTTTCCG 4928
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || |||||||||||||| ||| | ||||||||||| || || |||
Sbjct 4927 GCAAAGATCAGTCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGAATTTTAGCCTTC 4868
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | | | || ||| | || |||| || ||||| |||||||| | |||
Sbjct 4867 ACGTTGTCAATGGTGTCAGAGCTTTCGACCTCCAGCGTGATGGTTTTGCCGGTGAGGGTT 4808
Query 21159 TTGACAAATATTTGCAT 21175
|||||||| ||||||||
Sbjct 4807 TTGACAAAGATTTGCAT 4791
Score = 102 bits (112), Expect = 7e-17
Identities = 144/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| || || |||| || | ||||||| ||||| |||||
Sbjct 5215 GTGGACTCCTTCTGTATGTTGTAATCGGCCAAAGTGCGACCGTCCTCGAGCTGCTTGCCG 5156
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || | ||||||||||| ||| | || |||||||| ||| || |||
Sbjct 5155 GCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGGATTTTCGCCTTC 5096
Query 21099 ACCTGGCCGACAGTATCACCGGGCTC-CGT-TTCCACGGTAATGGTCTTGCCGGTTAACG 21156
|| | ||| ||| || || |||| || ||||| || ||||| || || |||| |
Sbjct 5095 ACGTTATCGATAGTGTC--CGAGCTCTCGACTTCCAACGTGATGGTTTTCCCTGTTAGGG 5038
Query 21157 TTTTGACAAATATTTGCAT 21175
|||||||||| ||||||||
Sbjct 5037 TTTTGACAAAGATTTGCAT 5019
Score = 98.7 bits (108), Expect = 8e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022
||| |||| ||||| ||| || ||||| || || |||||||| || || || || | ||
Sbjct 5915 GAGTACCAAATGCAGAGTCGATTCCTTCTGGATATTATAGTCGGCAAGCGTACGGCCATC 5856
Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082
||| ||||| ||||| ||| | || || ||||||||||| || | || ||||| ||
Sbjct 5855 CTCAAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTATC 5796
Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142
|||||| ||| || | | | | || || ||| ||||| || || ||
Sbjct 5795 CTGGATCTTCGCTTTAACGTTGTCAATGGTGTCGGAACTCTCGACTTCCAATGTGATAGT 5736
Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
||| |||||||| || || ||||| || ||||||
Sbjct 5735 CTTCCCGGTTAAGGTCTTCACAAAGATCTGCATT 5702
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || || || ||||| |||| ||| || ||||||| ||||| |||||
Sbjct 4759 GTGGACTCCTTCTGGATATTGTAGTCGGCCAAAGTTCGGCCGTCCTCGAGCTGCTTGCCG 4700
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || || || ||||| || ||| | ||||||||||| ||| || ||
Sbjct 4699 GCAAAGATCAGCCTTTGCTGATCTGGGGGAATCCCTTCCTTGTCCTGGATTTTGGCCTTG 4640
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| ||||| ||| || | ||| |||||||| || |||| ||
Sbjct 4639 ACGTTGTCGATTGTATCGGAACTCTCGACCTCTAGGGTGATGGTCTTTCCAGTTAGTGTC 4580
Query 21159 TTGACAAATATTTGCAT 21175
|| || || || |||||
Sbjct 4579 TTAACGAAGATCTGCAT 4563
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| |||| || | || |||| ||| | || || ||||| |||||||| ||||| |
Sbjct 5703 TTCCACCTCTCAATCGAAGAACCAAATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCAG 5644
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
| || || | | ||||| ||||| || |||||| | || || ||||||||||| |
Sbjct 5643 CAAGCGTACGACCATCCTCGAGCTGCTTACCCGCAAAGATCAGCCTCTGCTGGTCTGGTG 5584
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | || ||||| || ||||| ||||| | | ||| || || | |||
Sbjct 5583 GGATACCCTCCTTATCTTGAATCTTAGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCAA 5524
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || |||||||| ||||| || || || ||||| || |||||
Sbjct 5523 CCTCGAGAGTGATGGTCTTTCCGGTCAATGTCTTCACAAAGATCTGCAT 5475
>seq243249
Length=1014
Score = 105 bits (116), Expect = 6e-18
Identities = 139/194 (72%), Gaps = 9/194 (5%)
Strand=Plus/Plus
Query 20980 TGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCG 21039
||||||||||||| ||| | ||||| || |||||| | ||||||| |||||||| || |
Sbjct 757 TGGACTCCTTTTGGATGCTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGTTTTCCGG 816
Query 21040 CATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCA 21099
| | || || | ||||||||| || | ||||||||||||||| |||||
Sbjct 817 CGAAGATGAGCCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCGGC---------TTTCA 867
Query 21100 CCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTT 21159
| | | || || || || ||| |||| || |||||||||||||||| ||||
Sbjct 868 CGTTGTAGATGGTGTCGGAGGACTCAACCTCCAACGTTATGGTCTTGCCGGTTAGAGTTT 927
Query 21160 TGACAAATATTTGC 21173
| ||||| || |||
Sbjct 928 TCACAAAGATCTGC 941
>seq268484
Length=6331
Score = 104 bits (114), Expect = 2e-17
Identities = 142/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 20985 TCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAA 21044
||||| || ||||| ||||| || |||| | | ||||||| |||| ||| || || |
Sbjct 937 TCCTTCTGGATGTTGTAGTCGGCTAGGGGTCCGCCGTCCTCGAGCTATTTTCCGGCGAAG 996
Query 21045 ATAAGTCTCTGCTGGTCC-ACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTG 21103
|| || | || ||||||| ||||| | |||||||||||| |||||| |||||| |
Sbjct 997 ATGAGGCGCTACTGGTCCGACGGG-ATGCCTTCCTTGTCTTGGATCTTGGCTTTCACGTT 1055
Query 21104 GCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGAC 21163
| ||| || || || ||| |||| || |||| ||||||||||| ||||| ||
Sbjct 1056 GTCGATGGTGTCGGAGGACTCGACCTCCAACGTGATGGCCTTGCCGGTTAGGGTTTTCAC 1115
Query 21164 AAATATTTGCATTTTG 21179
|| || ||||| |||
Sbjct 1116 GAAGATCTGCATCTTG 1131
>seq141081
Length=4874
Score = 102 bits (112), Expect = 7e-17
Identities = 100/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022
||| |||| ||| | |||||||||||| || | ||| ||||| || |||||| | ||||
Sbjct 2007 GAGGACCAAATGGAGAGTGGACTCCTTCTGGACGTTGTAGTCAGCAAGGGTTCGACCGTC 2066
Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082
||||| ||||| | ||| ||||||||||||||||||| | || | || ||| |||||
Sbjct 2067 TTCCAGTTGTTTTCTAGCAAAAATAAGTCTCTGCTGGTCTAGAGGGATGCATTCTTTGTC 2126
Query 21083 GGCGATCTT 21091
||||||
Sbjct 2127 TTGGATCTT 2135
>seq277754
Length=2847
Score = 95.1 bits (104), Expect = 1e-14
Identities = 137/195 (70%), Gaps = 9/195 (5%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|| ||||||||||| ||||| ||||| || |||||| ||||||| || ||||| ||
Sbjct 2774 GTAGACTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTACCGTCCTCGAGTTGTTTTCCG 2715
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| | || || | ||||||||| || | ||||||||||||||| ||||
Sbjct 2714 GCGAAGATGAGCCGTTGCTGGTCCGGTGGGATGCCTTCCTTGTCGGC---------TTTC 2664
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | || || || || ||| |||| || |||||||||||||||| |||
Sbjct 2663 ACGTTGTAGATGGTGTCGGAGGACTCAACCTCCAGCGTTATGGTCTTGCCGGTTAGGGTT 2604
Query 21159 TTGACAAATATTTGC 21173
|| || || || |||
Sbjct 2603 TTCACGAAGATCTGC 2589
>seq13062
Length=30343
Score = 95.1 bits (104), Expect = 1e-14
Identities = 137/195 (70%), Gaps = 9/195 (5%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| | ||||| ||||| || ||||||| | ||||||| |||| ||| |
Sbjct 28583 GTGGACTCCTTCTAGATGTTGTAGTCGGCTAGGGTTTTGCCGTCCTCGAGCTATTTTTCG 28642
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
| | || || | |||||||||| || | ||||||||||||||| ||||
Sbjct 28643 TCGAAGATGAGGCGTTGCTGGTCCAACGGGATGCCTTCCTTGTCGGC---------TTTC 28693
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | || || || || ||| |||| || |||||||||||||||| |||
Sbjct 28694 ACGTTGTAGATGGTGTCGGAGGACTCAACCTCCAATGTTATGGTCTTGCCGGTTAGGGTT 28753
Query 21159 TTGACAAATATTTGC 21173
|| || || || |||
Sbjct 28754 TTTACGAAGATCTGC 28768
>seq118537
Length=769
Score = 93.3 bits (102), Expect = 4e-14
Identities = 126/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 20985 TCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAA 21044
||||| || || || ||||| || |||||| | ||||||| |||||||| | ||| |
Sbjct 280 TCCTTCTGGATATTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGTTTTTCGGCAAAG 339
Query 21045 ATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGG 21104
| || | ||||||||| || | |||||||||||| |||||| |||||| | |
Sbjct 340 TTGAGGCGTTGCTGGTCCGGCGGGAAGCCTTCCTTGTCTTGGATCTTGGCTTTCACGTTG 399
Query 21105 CCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTT 21160
|||| || || || ||| |||| || |||||||||||| ||| |||||
Sbjct 400 TCGACGGTGTCGGAGGACTCGACCTCCAACGTGATGGTCTTGCCGATTAGGGTTTT 455
>seq62239
Length=9780
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| ||||| || ||||| | ||||||| ||||| || ||
Sbjct 5361 GTGGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTCCTGCCGTCCTCGAGCTGCTTCCCG 5420
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| | || || | ||||||||| || | |||||||||||| |||||| ||
Sbjct 5421 GCGAAGATGAGGCGTTGCTGGTCCGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTG 5480
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| || || || || || | ||| ||||| || ||||||| |||
Sbjct 5481 ACATTGTCGATGGTGTCGGAGGATTCGACCTCTAGGGTTATGGTTTTCCCGGTTAGGGTT 5540
Query 21159 TTGACAAATATTTGCATTTT 21178
|| || || || ||||| ||
Sbjct 5541 TTCACGAAGATCTGCATCTT 5560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419871807974696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |