Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27] 463,906 sequences; 661,937,708 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq145598 89.7 8e-13 >seq145598 Length=10865 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 ||||| || || ||||||| || | ||| | || |||||||| || || || || Sbjct 9507 GTTCCTCCCCTCAGTCTTAGAACAAGATGGAGTGTTGATTCTTTCTGGATGTTGTAGTCA 9566 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | ||| |||| | ||| |||||||| || |||||||||||||| || || ||||| ||| Sbjct 9567 GCAAGTGTTCGTCCATCCTCTAATTGCTTGCCAGCAAAAATCAACCTCTGTTGATCTGGA 9626 Query 146168 GGAATTCCTTCTTTATC 146184 || || || ||||| || Sbjct 9627 GGGATACCCTCTTTGTC 9643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739214820523520