Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27] 463,906 sequences; 661,937,708 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq145598 84.2 2e-11 >seq145598 Length=10865 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||||| ||||| || || | || |||||||||||||| || ||||||||||| || Sbjct 9509 TCCTCCCCTCAGTCTTAGAACAAGATGGAGTGTTGATTCTTTCTGGATGTTGTAGTCAGC 9568 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211 | |||| | ||| || ||||| ||||| ||| | || | || |||||||| Sbjct 9569 AAGTGTTCGTCCATCCTCTAATTGCTTGCCAGCAAAAATCAACCTCTGTTGATC 9622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 377199244265970