Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq62239 87.8 1e-12
>seq62239
Length=9780
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| || || |||||| ||||||| ||||| |||||| | || |||||||| |
Sbjct 5557 ATGCAGATCTTCGTGAAAACCCTAACCGGGAAAACCATAACCCTAGAGGTCGAATCCTCC 5498
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | || | ||| |||| || || | || |||||| | ||| ||||||
Sbjct 5497 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCGGACCAG 5438
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
||||| | || | || || || || || || || || ||| | ||| |||| |
Sbjct 5437 CAACGCCTCATCTTCGCCGGGAAGCAGCTCGAGGACGGCAGGACCCTAGCCGACTACAAC 5378
Query 25012 ATACAGAAAGAGGCCACGCTTCA 25034
|| ||||| ||| |||| || ||
Sbjct 5377 ATCCAGAAGGAGTCCACCCTCCA 5355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415938970099520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |